Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 AL031577.2-201ENST00000404133 280 ntBASIC0.16□□□□□ -2.38
LIMD2Q9BT23 MIR1283-1-201ENST00000408494 87 ntBASIC0.16□□□□□ -2.38
LIMD2Q9BT23 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.16□□□□□ -2.38
LIMD2Q9BT23 MTCO2P12-201ENST00000427426 682 ntBASIC0.16□□□□□ -2.38
LIMD2Q9BT23 AC092423.1-201ENST00000430165 186 ntBASIC0.16□□□□□ -2.38
LIMD2Q9BT23 USP9YP28-201ENST00000435142 589 ntBASIC0.16□□□□□ -2.38
LIMD2Q9BT23 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.16□□□□□ -2.38
LIMD2Q9BT23 AL049830.1-201ENST00000468034 425 ntBASIC0.16□□□□□ -2.38
LIMD2Q9BT23 AL163973.1-201ENST00000484753 577 ntBASIC0.16□□□□□ -2.38
LIMD2Q9BT23 RNU4-57P-201ENST00000515980 135 ntBASIC0.16□□□□□ -2.38
LIMD2Q9BT23 RNU6-685P-201ENST00000517088 95 ntBASIC0.16□□□□□ -2.38
LIMD2Q9BT23 AC087854.1-201ENST00000519706 414 ntBASIC0.16□□□□□ -2.38
LIMD2Q9BT23 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.16□□□□□ -2.38
LIMD2Q9BT23 AC008521.1-201ENST00000587471 187 ntBASIC0.16□□□□□ -2.38
LIMD2Q9BT23 AL512605.2-201ENST00000592972 256 ntBASIC0.16□□□□□ -2.38
LIMD2Q9BT23 Z83818.1-201ENST00000603584 150 ntBASIC0.16□□□□□ -2.38
LIMD2Q9BT23 AL357312.1-201ENST00000603879 298 ntBASIC0.16□□□□□ -2.38
LIMD2Q9BT23 AL031775.1-201ENST00000607014 887 ntBASIC0.16□□□□□ -2.38
LIMD2Q9BT23 AL360219.1-201ENST00000610230 366 ntBASIC0.16□□□□□ -2.38
LIMD2Q9BT23 AL359697.1-201ENST00000624879 587 ntBASIC0.16□□□□□ -2.38
LIMD2Q9BT23 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.16□□□□□ -2.38
LIMD2Q9BT23 AC121333.1-201ENST00000567488 2709 ntBASIC0.16□□□□□ -2.38
LIMD2Q9BT23 AC027514.1-201ENST00000588561 1603 ntBASIC0.16□□□□□ -2.38
LIMD2Q9BT23 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.15□□□□□ -2.39
LIMD2Q9BT23 RNU6-545P-201ENST00000362681 104 ntBASIC0.15□□□□□ -2.39
LIMD2Q9BT23 RNA5SP499-201ENST00000363982 119 ntBASIC0.15□□□□□ -2.39
LIMD2Q9BT23 RNU4-76P-201ENST00000364509 141 ntBASIC0.15□□□□□ -2.39
LIMD2Q9BT23 Y_RNA.287-201ENST00000364853 94 ntBASIC0.15□□□□□ -2.39
LIMD2Q9BT23 Y_RNA.472-201ENST00000384322 102 ntBASIC0.15□□□□□ -2.39
LIMD2Q9BT23 SNORD116-13-201ENST00000384408 92 ntBASIC0.15□□□□□ -2.39
LIMD2Q9BT23 RNU6-1257P-201ENST00000384625 110 ntBASIC0.15□□□□□ -2.39
LIMD2Q9BT23 MIR660-201ENST00000385235 97 ntBASIC0.15□□□□□ -2.39
LIMD2Q9BT23 MIR518E-201ENST00000385252 88 ntBASIC0.15□□□□□ -2.39
LIMD2Q9BT23 MIR1295A-201ENST00000408463 79 ntBASIC0.15□□□□□ -2.39
LIMD2Q9BT23 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.15□□□□□ -2.39
LIMD2Q9BT23 AC098934.3-201ENST00000430450 190 ntBASIC0.15□□□□□ -2.39
LIMD2Q9BT23 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.15□□□□□ -2.39
LIMD2Q9BT23 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.15□□□□□ -2.39
LIMD2Q9BT23 RPS20P10-201ENST00000451209 253 ntBASIC0.15□□□□□ -2.39
LIMD2Q9BT23 AC108740.1-201ENST00000498629 225 ntBASIC0.15□□□□□ -2.39
LIMD2Q9BT23 AC016632.1-201ENST00000503994 196 ntBASIC0.15□□□□□ -2.39
LIMD2Q9BT23 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.15□□□□□ -2.39
LIMD2Q9BT23 MTND3P25-201ENST00000509243 135 ntBASIC0.15□□□□□ -2.39
LIMD2Q9BT23 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.15□□□□□ -2.39
LIMD2Q9BT23 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.15□□□□□ -2.39
LIMD2Q9BT23 MIR5093-201ENST00000583199 100 ntBASIC0.15□□□□□ -2.39
LIMD2Q9BT23 AC073539.2-201ENST00000597113 165 ntBASIC0.15□□□□□ -2.39
LIMD2Q9BT23 AC080078.2-201ENST00000603766 501 ntBASIC0.15□□□□□ -2.39
LIMD2Q9BT23 AC121334.2-201ENST00000605387 271 ntBASIC0.15□□□□□ -2.39
LIMD2Q9BT23 AL138726.1-201ENST00000614873 333 ntBASIC0.15□□□□□ -2.39
LIMD2Q9BT23 MIR8054-201ENST00000620877 86 ntBASIC0.15□□□□□ -2.39
LIMD2Q9BT23 AC068787.1-201ENST00000623908 691 ntBASIC0.15□□□□□ -2.39
LIMD2Q9BT23 U6.108-201ENST00000637764 58 ntBASIC0.15□□□□□ -2.39
LIMD2Q9BT23 AC099786.3-201ENST00000565735 1410 ntBASIC0.14□□□□□ -2.39
LIMD2Q9BT23 SNORA63.3-201ENST00000362682 132 ntBASIC0.14□□□□□ -2.39
LIMD2Q9BT23 RNU6-552P-201ENST00000362869 119 ntBASIC0.14□□□□□ -2.39
LIMD2Q9BT23 SNORD56.2-201ENST00000363242 71 ntBASIC0.14□□□□□ -2.39
LIMD2Q9BT23 SNORD114-23-201ENST00000363536 72 ntBASIC0.14□□□□□ -2.39
LIMD2Q9BT23 Y_RNA.269-201ENST00000364685 89 ntBASIC0.14□□□□□ -2.39
LIMD2Q9BT23 RNU4-48P-201ENST00000365559 182 ntBASIC0.14□□□□□ -2.39
LIMD2Q9BT23 Y_RNA.465-201ENST00000384293 102 ntBASIC0.14□□□□□ -2.39
LIMD2Q9BT23 RNU6-45P-201ENST00000384471 107 ntBASIC0.14□□□□□ -2.39
LIMD2Q9BT23 MIR216A-201ENST00000385063 110 ntBASIC0.14□□□□□ -2.39
LIMD2Q9BT23 SNORA12.1-201ENST00000390873 148 ntBASIC0.14□□□□□ -2.39
LIMD2Q9BT23 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.14□□□□□ -2.39
LIMD2Q9BT23 CDK8P2-201ENST00000415020 547 ntBASIC0.14□□□□□ -2.39
LIMD2Q9BT23 AC010154.1-201ENST00000425857 269 ntBASIC0.14□□□□□ -2.39
LIMD2Q9BT23 CALM2P2-201ENST00000428512 440 ntBASIC0.14□□□□□ -2.39
LIMD2Q9BT23 AL445305.1-201ENST00000432577 575 ntBASIC0.14□□□□□ -2.39
LIMD2Q9BT23 SNAP23P1-201ENST00000433229 246 ntBASIC0.14□□□□□ -2.39
LIMD2Q9BT23 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.14□□□□□ -2.39
LIMD2Q9BT23 ZNF736P1Y-201ENST00000440402 1276 ntBASIC0.14□□□□□ -2.39
LIMD2Q9BT23 MTND4LP16-201ENST00000440828 295 ntBASIC0.14□□□□□ -2.39
LIMD2Q9BT23 AL606517.2-201ENST00000442855 241 ntBASIC0.14□□□□□ -2.39
LIMD2Q9BT23 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.14□□□□□ -2.39
LIMD2Q9BT23 AC008628.2-201ENST00000502605 298 ntBASIC0.14□□□□□ -2.39
LIMD2Q9BT23 HMGB1P29-201ENST00000505659 499 ntBASIC0.14□□□□□ -2.39
LIMD2Q9BT23 AC010376.1-201ENST00000522101 334 ntBASIC0.14□□□□□ -2.39
LIMD2Q9BT23 MIR4711-201ENST00000578274 70 ntBASIC0.14□□□□□ -2.39
LIMD2Q9BT23 MTND1P15-201ENST00000579262 949 ntBASIC0.14□□□□□ -2.39
LIMD2Q9BT23 AL162424.1-201ENST00000602325 221 ntBASIC0.14□□□□□ -2.39
LIMD2Q9BT23 AC022217.4-201ENST00000604389 163 ntBASIC0.14□□□□□ -2.39
LIMD2Q9BT23 Z99289.3-201ENST00000605586 594 ntBASIC0.14□□□□□ -2.39
LIMD2Q9BT23 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.14□□□□□ -2.39
LIMD2Q9BT23 AC104458.1-201ENST00000608243 463 ntBASIC0.14□□□□□ -2.39
LIMD2Q9BT23 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.14□□□□□ -2.39
LIMD2Q9BT23 AC073349.3-201ENST00000617616 186 ntBASIC0.14□□□□□ -2.39
LIMD2Q9BT23 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.14□□□□□ -2.39
LIMD2Q9BT23 AL157786.1-207ENST00000627771 695 ntBASIC0.14□□□□□ -2.39
LIMD2Q9BT23 AC091948.2-201ENST00000636510 279 ntBASIC0.14□□□□□ -2.39
LIMD2Q9BT23 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.13□□□□□ -2.39
LIMD2Q9BT23 RNU6-336P-201ENST00000364891 107 ntBASIC0.13□□□□□ -2.39
LIMD2Q9BT23 RNU6-1335P-201ENST00000365426 107 ntBASIC0.13□□□□□ -2.39
LIMD2Q9BT23 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.13□□□□□ -2.39
LIMD2Q9BT23 RNU6-975P-201ENST00000384296 105 ntBASIC0.13□□□□□ -2.39
LIMD2Q9BT23 RNU6-348P-201ENST00000384386 107 ntBASIC0.13□□□□□ -2.39
LIMD2Q9BT23 SNORA24.1-201ENST00000384401 135 ntBASIC0.13□□□□□ -2.39
LIMD2Q9BT23 SNORA75.2-201ENST00000391138 150 ntBASIC0.13□□□□□ -2.39
LIMD2Q9BT23 SNORA75.3-201ENST00000391231 150 ntBASIC0.13□□□□□ -2.39
LIMD2Q9BT23 AL034345.1-201ENST00000407768 123 ntBASIC0.13□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms