Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 U3.9-201ENST00000363823 204 ntBASIC2.67□□□□□ -1.98
PAAF1Q9BRP4 Y_RNA.358-201ENST00000365491 99 ntBASIC2.67□□□□□ -1.98
PAAF1Q9BRP4 RNY1P14-201ENST00000384426 108 ntBASIC2.67□□□□□ -1.98
PAAF1Q9BRP4 Y_RNA.496-201ENST00000384444 101 ntBASIC2.67□□□□□ -1.98
PAAF1Q9BRP4 SNORA3.2-201ENST00000408221 125 ntBASIC2.67□□□□□ -1.98
PAAF1Q9BRP4 MIR320B2-201ENST00000408479 138 ntBASIC2.67□□□□□ -1.98
PAAF1Q9BRP4 RN7SKP284-201ENST00000411002 343 ntBASIC2.67□□□□□ -1.98
PAAF1Q9BRP4 MCFD2P1-201ENST00000417812 300 ntBASIC2.67□□□□□ -1.98
PAAF1Q9BRP4 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.67□□□□□ -1.98
PAAF1Q9BRP4 USP9YP16-201ENST00000430287 407 ntBASIC2.67□□□□□ -1.98
PAAF1Q9BRP4 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.67□□□□□ -1.98
PAAF1Q9BRP4 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.67□□□□□ -1.98
PAAF1Q9BRP4 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.67□□□□□ -1.98
PAAF1Q9BRP4 USP9YP23-201ENST00000455085 407 ntBASIC2.67□□□□□ -1.98
PAAF1Q9BRP4 AC080013.2-201ENST00000460866 323 ntBASIC2.67□□□□□ -1.98
PAAF1Q9BRP4 AC090515.1-201ENST00000465295 476 ntBASIC2.67□□□□□ -1.98
PAAF1Q9BRP4 RN7SL283P-201ENST00000489055 303 ntBASIC2.67□□□□□ -1.98
PAAF1Q9BRP4 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.67□□□□□ -1.98
PAAF1Q9BRP4 RNU6-56P-201ENST00000516986 93 ntBASIC2.67□□□□□ -1.98
PAAF1Q9BRP4 ELOCP31-201ENST00000540463 467 ntBASIC2.67□□□□□ -1.98
PAAF1Q9BRP4 HSBP1P1-201ENST00000555205 166 ntBASIC2.67□□□□□ -1.98
PAAF1Q9BRP4 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.67□□□□□ -1.98
PAAF1Q9BRP4 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
PAAF1Q9BRP4 MTND5P16-201ENST00000460269 1703 ntBASIC2.66□□□□□ -1.98
PAAF1Q9BRP4 RNU1-115P-201ENST00000365329 160 ntBASIC2.66□□□□□ -1.98
PAAF1Q9BRP4 SET-203ENST00000372688 801 ntTSL 2 BASIC2.66□□□□□ -1.98
PAAF1Q9BRP4 RNU2-63P-201ENST00000410792 194 ntBASIC2.66□□□□□ -1.98
PAAF1Q9BRP4 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.66□□□□□ -1.98
PAAF1Q9BRP4 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.66□□□□□ -1.98
PAAF1Q9BRP4 AL160004.2-201ENST00000432935 350 ntBASIC2.66□□□□□ -1.98
PAAF1Q9BRP4 UBBP3-201ENST00000445497 241 ntBASIC2.66□□□□□ -1.98
PAAF1Q9BRP4 MTND4P19-201ENST00000446659 478 ntBASIC2.66□□□□□ -1.98
PAAF1Q9BRP4 CYP2C59P-201ENST00000457790 269 ntBASIC2.66□□□□□ -1.98
PAAF1Q9BRP4 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.66□□□□□ -1.98
PAAF1Q9BRP4 RN7SL297P-201ENST00000483161 293 ntBASIC2.66□□□□□ -1.98
PAAF1Q9BRP4 ANXA2P1-201ENST00000505539 926 ntBASIC2.66□□□□□ -1.98
PAAF1Q9BRP4 RNA5SP54-201ENST00000516951 92 ntBASIC2.66□□□□□ -1.98
PAAF1Q9BRP4 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.66□□□□□ -1.98
PAAF1Q9BRP4 Y_RNA.812-201ENST00000610788 101 ntBASIC2.66□□□□□ -1.98
PAAF1Q9BRP4 PCGEM1.1-201ENST00000613431 131 ntBASIC2.66□□□□□ -1.98
PAAF1Q9BRP4 Y_RNA.784-201ENST00000613803 101 ntBASIC2.66□□□□□ -1.98
PAAF1Q9BRP4 AC040896.1-201ENST00000613819 479 ntBASIC2.66□□□□□ -1.98
PAAF1Q9BRP4 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.66□□□□□ -1.98
PAAF1Q9BRP4 Y_RNA.787-201ENST00000616522 101 ntBASIC2.66□□□□□ -1.98
PAAF1Q9BRP4 AL132822.1-201ENST00000617063 513 ntBASIC2.66□□□□□ -1.98
PAAF1Q9BRP4 Y_RNA.780-201ENST00000617336 101 ntBASIC2.66□□□□□ -1.98
PAAF1Q9BRP4 Y_RNA.801-201ENST00000619005 101 ntBASIC2.66□□□□□ -1.98
PAAF1Q9BRP4 AC064859.1-201ENST00000624741 174 ntBASIC2.66□□□□□ -1.98
PAAF1Q9BRP4 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
PAAF1Q9BRP4 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
PAAF1Q9BRP4 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
PAAF1Q9BRP4 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.98
PAAF1Q9BRP4 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
PAAF1Q9BRP4 RNU6-222P-201ENST00000362438 107 ntBASIC2.65□□□□□ -1.99
PAAF1Q9BRP4 RNA5SP240-201ENST00000365355 128 ntBASIC2.65□□□□□ -1.99
PAAF1Q9BRP4 MIR487A-201ENST00000385009 80 ntBASIC2.65□□□□□ -1.99
PAAF1Q9BRP4 SNORA46.1-201ENST00000391069 153 ntBASIC2.65□□□□□ -1.99
PAAF1Q9BRP4 AL359511.1-201ENST00000402970 211 ntBASIC2.65□□□□□ -1.99
PAAF1Q9BRP4 Y_RNA.597-201ENST00000410463 100 ntBASIC2.65□□□□□ -1.99
PAAF1Q9BRP4 RPS26P42-201ENST00000413485 326 ntBASIC2.65□□□□□ -1.99
PAAF1Q9BRP4 AC104332.2-201ENST00000429959 156 ntBASIC2.65□□□□□ -1.99
PAAF1Q9BRP4 AL445687.1-201ENST00000439946 251 ntBASIC2.65□□□□□ -1.99
PAAF1Q9BRP4 AP000870.1-201ENST00000472927 406 ntBASIC2.65□□□□□ -1.99
PAAF1Q9BRP4 RN7SL636P-201ENST00000497504 294 ntBASIC2.65□□□□□ -1.99
PAAF1Q9BRP4 RNA5SP24-201ENST00000516478 95 ntBASIC2.65□□□□□ -1.99
PAAF1Q9BRP4 EIF4A1P12-201ENST00000551910 141 ntBASIC2.65□□□□□ -1.99
PAAF1Q9BRP4 AC090517.1-201ENST00000569307 266 ntBASIC2.65□□□□□ -1.99
PAAF1Q9BRP4 AC006600.1-201ENST00000572529 153 ntBASIC2.65□□□□□ -1.99
PAAF1Q9BRP4 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.65□□□□□ -1.99
PAAF1Q9BRP4 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.65□□□□□ -1.99
PAAF1Q9BRP4 AL713866.2-201ENST00000603579 219 ntBASIC2.65□□□□□ -1.99
PAAF1Q9BRP4 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.65□□□□□ -1.99
PAAF1Q9BRP4 AC087588.2-201ENST00000617667 426 ntBASIC2.65□□□□□ -1.99
PAAF1Q9BRP4 AL138825.1-201ENST00000618587 192 ntBASIC2.65□□□□□ -1.99
PAAF1Q9BRP4 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.65□□□□□ -1.99
PAAF1Q9BRP4 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
PAAF1Q9BRP4 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
PAAF1Q9BRP4 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
PAAF1Q9BRP4 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.64□□□□□ -1.99
PAAF1Q9BRP4 ZNF72P-201ENST00000425869 1908 ntBASIC2.64□□□□□ -1.99
PAAF1Q9BRP4 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
PAAF1Q9BRP4 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.64□□□□□ -1.99
PAAF1Q9BRP4 ZNF204P-201ENST00000416749 2397 ntBASIC2.64□□□□□ -1.99
PAAF1Q9BRP4 RNU6-874P-201ENST00000362390 105 ntBASIC2.64□□□□□ -1.99
PAAF1Q9BRP4 RNU4-42P-201ENST00000364738 142 ntBASIC2.64□□□□□ -1.99
PAAF1Q9BRP4 SNORA51.4-201ENST00000364993 124 ntBASIC2.64□□□□□ -1.99
PAAF1Q9BRP4 U8.10-201ENST00000384260 133 ntBASIC2.64□□□□□ -1.99
PAAF1Q9BRP4 RNU6-220P-201ENST00000390919 107 ntBASIC2.64□□□□□ -1.99
PAAF1Q9BRP4 SNORA12-201ENST00000391162 147 ntBASIC2.64□□□□□ -1.99
PAAF1Q9BRP4 AL139095.1-201ENST00000404326 391 ntBASIC2.64□□□□□ -1.99
PAAF1Q9BRP4 MIR1261-201ENST00000408659 82 ntBASIC2.64□□□□□ -1.99
PAAF1Q9BRP4 RNA5SP201-201ENST00000410316 124 ntBASIC2.64□□□□□ -1.99
PAAF1Q9BRP4 WARS2P1-201ENST00000429678 537 ntBASIC2.64□□□□□ -1.99
PAAF1Q9BRP4 AL445305.1-201ENST00000432577 575 ntBASIC2.64□□□□□ -1.99
PAAF1Q9BRP4 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.64□□□□□ -1.99
PAAF1Q9BRP4 RPL21P2-201ENST00000440049 481 ntBASIC2.64□□□□□ -1.99
PAAF1Q9BRP4 AL161788.1-201ENST00000441805 169 ntBASIC2.64□□□□□ -1.99
PAAF1Q9BRP4 RNU6-58P-201ENST00000517143 103 ntBASIC2.64□□□□□ -1.99
PAAF1Q9BRP4 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.64□□□□□ -1.99
PAAF1Q9BRP4 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms