Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 RNU6-815P-201ENST00000384080 113 ntBASIC-0.09□□□□□ -2.42
VPS25Q9BRG1 RPL17P50-201ENST00000396131 546 ntBASIC-0.09□□□□□ -2.42
VPS25Q9BRG1 CALM2P3-201ENST00000400429 449 ntBASIC-0.09□□□□□ -2.42
VPS25Q9BRG1 MIR208B-201ENST00000401172 77 ntBASIC-0.09□□□□□ -2.42
VPS25Q9BRG1 AP000275.1-201ENST00000411943 390 ntBASIC-0.09□□□□□ -2.42
VPS25Q9BRG1 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.09□□□□□ -2.42
VPS25Q9BRG1 CDK8P2-201ENST00000415020 547 ntBASIC-0.09□□□□□ -2.42
VPS25Q9BRG1 AC016909.1-201ENST00000415916 166 ntBASIC-0.09□□□□□ -2.42
VPS25Q9BRG1 MTCYBP10-201ENST00000424905 650 ntBASIC-0.09□□□□□ -2.42
VPS25Q9BRG1 USP9YP11-201ENST00000427537 717 ntBASIC-0.09□□□□□ -2.42
VPS25Q9BRG1 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC-0.09□□□□□ -2.42
VPS25Q9BRG1 RN7SL429P-201ENST00000479090 223 ntBASIC-0.09□□□□□ -2.42
VPS25Q9BRG1 RN7SL489P-201ENST00000486185 223 ntBASIC-0.09□□□□□ -2.42
VPS25Q9BRG1 RN7SL327P-201ENST00000488659 223 ntBASIC-0.09□□□□□ -2.42
VPS25Q9BRG1 AC010469.2-201ENST00000496412 480 ntBASIC-0.09□□□□□ -2.42
VPS25Q9BRG1 RBBP4P6-201ENST00000508098 202 ntBASIC-0.09□□□□□ -2.42
VPS25Q9BRG1 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC-0.09□□□□□ -2.42
VPS25Q9BRG1 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC-0.09□□□□□ -2.42
VPS25Q9BRG1 ADI1P3-201ENST00000549509 470 ntBASIC-0.09□□□□□ -2.42
VPS25Q9BRG1 AL357312.1-201ENST00000603879 298 ntBASIC-0.09□□□□□ -2.42
VPS25Q9BRG1 Z99289.3-201ENST00000605586 594 ntBASIC-0.09□□□□□ -2.42
VPS25Q9BRG1 RN7SL853P-201ENST00000617250 223 ntBASIC-0.09□□□□□ -2.42
VPS25Q9BRG1 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC-0.09□□□□□ -2.42
VPS25Q9BRG1 AL445523.1-201ENST00000451184 1362 ntBASIC-0.09□□□□□ -2.42
VPS25Q9BRG1 RNU6-37P-201ENST00000362692 107 ntBASIC-0.1□□□□□ -2.43
VPS25Q9BRG1 RNU6-11P-201ENST00000364234 107 ntBASIC-0.1□□□□□ -2.43
VPS25Q9BRG1 RNU6-336P-201ENST00000364891 107 ntBASIC-0.1□□□□□ -2.43
VPS25Q9BRG1 RNU6-25P-201ENST00000383873 107 ntBASIC-0.1□□□□□ -2.43
VPS25Q9BRG1 RNU6-1-201ENST00000383898 107 ntBASIC-0.1□□□□□ -2.43
VPS25Q9BRG1 RNU6-48P-201ENST00000384161 107 ntBASIC-0.1□□□□□ -2.43
VPS25Q9BRG1 RNU6-36P-201ENST00000384172 107 ntBASIC-0.1□□□□□ -2.43
VPS25Q9BRG1 RNU6-4P-201ENST00000384205 107 ntBASIC-0.1□□□□□ -2.43
VPS25Q9BRG1 RNU6-5P-201ENST00000384238 107 ntBASIC-0.1□□□□□ -2.43
VPS25Q9BRG1 RNU6-3P-201ENST00000384314 107 ntBASIC-0.1□□□□□ -2.43
VPS25Q9BRG1 RNU6-15P-201ENST00000384534 107 ntBASIC-0.1□□□□□ -2.43
VPS25Q9BRG1 RNU6-2-201ENST00000384627 107 ntBASIC-0.1□□□□□ -2.43
VPS25Q9BRG1 RNU6-29P-201ENST00000384637 107 ntBASIC-0.1□□□□□ -2.43
VPS25Q9BRG1 RNU6-9-201ENST00000384776 107 ntBASIC-0.1□□□□□ -2.43
VPS25Q9BRG1 RNU6-33P-201ENST00000384793 107 ntBASIC-0.1□□□□□ -2.43
VPS25Q9BRG1 SNORA26.3-201ENST00000391119 136 ntBASIC-0.1□□□□□ -2.43
VPS25Q9BRG1 MIR548J-201ENST00000408833 112 ntBASIC-0.1□□□□□ -2.43
VPS25Q9BRG1 RNU2-3P-201ENST00000410144 191 ntBASIC-0.1□□□□□ -2.43
VPS25Q9BRG1 RNU2-62P-201ENST00000410868 191 ntBASIC-0.1□□□□□ -2.43
VPS25Q9BRG1 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC-0.1□□□□□ -2.43
VPS25Q9BRG1 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC-0.1□□□□□ -2.43
VPS25Q9BRG1 AC022364.2-201ENST00000457963 554 ntBASIC-0.1□□□□□ -2.43
VPS25Q9BRG1 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.1□□□□□ -2.43
VPS25Q9BRG1 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC-0.1□□□□□ -2.43
VPS25Q9BRG1 AC107934.1-201ENST00000522215 217 ntBASIC-0.1□□□□□ -2.43
VPS25Q9BRG1 AC024995.1-201ENST00000523014 93 ntBASIC-0.1□□□□□ -2.43
VPS25Q9BRG1 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC-0.1□□□□□ -2.43
VPS25Q9BRG1 MIR4711-201ENST00000578274 70 ntBASIC-0.1□□□□□ -2.43
VPS25Q9BRG1 MIR4753-201ENST00000585119 83 ntBASIC-0.1□□□□□ -2.43
VPS25Q9BRG1 AC146944.4-201ENST00000602697 718 ntBASIC-0.1□□□□□ -2.43
VPS25Q9BRG1 MTND3P19-201ENST00000603825 345 ntBASIC-0.1□□□□□ -2.43
VPS25Q9BRG1 AC091805.2-201ENST00000603848 235 ntBASIC-0.1□□□□□ -2.43
VPS25Q9BRG1 RNU6-6P-201ENST00000606623 107 ntBASIC-0.1□□□□□ -2.43
VPS25Q9BRG1 AC009994.1-201ENST00000606889 253 ntBASIC-0.1□□□□□ -2.43
VPS25Q9BRG1 AC004832.4-201ENST00000608952 331 ntBASIC-0.1□□□□□ -2.43
VPS25Q9BRG1 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC-0.1□□□□□ -2.43
VPS25Q9BRG1 MIR6788-201ENST00000618842 66 ntBASIC-0.1□□□□□ -2.43
VPS25Q9BRG1 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC-0.1□□□□□ -2.43
VPS25Q9BRG1 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC-0.1□□□□□ -2.43
VPS25Q9BRG1 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC-0.11□□□□□ -2.43
VPS25Q9BRG1 Y_RNA.46-201ENST00000362695 102 ntBASIC-0.11□□□□□ -2.43
VPS25Q9BRG1 SNORA25.3-201ENST00000363205 127 ntBASIC-0.11□□□□□ -2.43
VPS25Q9BRG1 SNORD105-201ENST00000386910 85 ntBASIC-0.11□□□□□ -2.43
VPS25Q9BRG1 RNA5SP504-201ENST00000410676 117 ntBASIC-0.11□□□□□ -2.43
VPS25Q9BRG1 RNA5SP247-201ENST00000411181 105 ntBASIC-0.11□□□□□ -2.43
VPS25Q9BRG1 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC-0.11□□□□□ -2.43
VPS25Q9BRG1 CALM2P4-201ENST00000430810 426 ntBASIC-0.11□□□□□ -2.43
VPS25Q9BRG1 STAG3L5P-204ENST00000443759 179 ntBASIC-0.11□□□□□ -2.43
VPS25Q9BRG1 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.11□□□□□ -2.43
VPS25Q9BRG1 SNORD111.1-201ENST00000516421 86 ntBASIC-0.11□□□□□ -2.43
VPS25Q9BRG1 AC022868.1-201ENST00000517767 391 ntBASIC-0.11□□□□□ -2.43
VPS25Q9BRG1 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC-0.11□□□□□ -2.43
VPS25Q9BRG1 MIR4524B-201ENST00000581569 115 ntBASIC-0.11□□□□□ -2.43
VPS25Q9BRG1 MIR151B-201ENST00000584249 96 ntBASIC-0.11□□□□□ -2.43
VPS25Q9BRG1 AC122133.1-201ENST00000613964 233 ntBASIC-0.11□□□□□ -2.43
VPS25Q9BRG1 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC-0.11□□□□□ -2.43
VPS25Q9BRG1 AL356596.1-201ENST00000624230 379 ntBASIC-0.11□□□□□ -2.43
VPS25Q9BRG1 MIR103A2-201ENST00000362154 78 ntBASIC-0.12□□□□□ -2.43
VPS25Q9BRG1 RNU6-462P-201ENST00000362659 105 ntBASIC-0.12□□□□□ -2.43
VPS25Q9BRG1 RNY1P10-201ENST00000363268 113 ntBASIC-0.12□□□□□ -2.43
VPS25Q9BRG1 SNORD114-22-201ENST00000365423 72 ntBASIC-0.12□□□□□ -2.43
VPS25Q9BRG1 RNU6-609P-201ENST00000365459 107 ntBASIC-0.12□□□□□ -2.43
VPS25Q9BRG1 Y_RNA.476-201ENST00000384347 108 ntBASIC-0.12□□□□□ -2.43
VPS25Q9BRG1 Y_RNA.504-201ENST00000384481 104 ntBASIC-0.12□□□□□ -2.43
VPS25Q9BRG1 MRPL42P3-201ENST00000401492 326 ntBASIC-0.12□□□□□ -2.43
VPS25Q9BRG1 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC-0.12□□□□□ -2.43
VPS25Q9BRG1 MIR1253-201ENST00000408273 105 ntBASIC-0.12□□□□□ -2.43
VPS25Q9BRG1 RNA5SP511-201ENST00000410487 115 ntBASIC-0.12□□□□□ -2.43
VPS25Q9BRG1 RNU2-70P-201ENST00000410718 179 ntBASIC-0.12□□□□□ -2.43
VPS25Q9BRG1 RPS3AP3-201ENST00000411933 242 ntBASIC-0.12□□□□□ -2.43
VPS25Q9BRG1 MTND4P3-201ENST00000417829 541 ntBASIC-0.12□□□□□ -2.43
VPS25Q9BRG1 USP9YP21-201ENST00000420603 432 ntBASIC-0.12□□□□□ -2.43
VPS25Q9BRG1 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC-0.12□□□□□ -2.43
VPS25Q9BRG1 MTCO3P10-201ENST00000455912 772 ntBASIC-0.12□□□□□ -2.43
VPS25Q9BRG1 TPT1P7-201ENST00000458300 517 ntBASIC-0.12□□□□□ -2.43
VPS25Q9BRG1 AC079382.1-201ENST00000493346 557 ntBASIC-0.12□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms