Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 AC090517.1-201ENST00000569307 266 ntBASIC3.03□□□□□ -1.92
NUP88Q99567 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.03□□□□□ -1.92
NUP88Q99567 MIR4719-201ENST00000585233 84 ntBASIC3.03□□□□□ -1.92
NUP88Q99567 AC092447.9-201ENST00000603395 144 ntBASIC3.03□□□□□ -1.92
NUP88Q99567 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.92
NUP88Q99567 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
NUP88Q99567 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.03□□□□□ -1.93
NUP88Q99567 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.03□□□□□ -1.93
NUP88Q99567 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.93
NUP88Q99567 MTND5P16-201ENST00000460269 1703 ntBASIC3.02□□□□□ -1.93
NUP88Q99567 RNU6-222P-201ENST00000362438 107 ntBASIC3.02□□□□□ -1.93
NUP88Q99567 Y_RNA.39-201ENST00000362620 98 ntBASIC3.02□□□□□ -1.93
NUP88Q99567 Y_RNA.252-201ENST00000364556 101 ntBASIC3.02□□□□□ -1.93
NUP88Q99567 Y_RNA.395-201ENST00000383945 109 ntBASIC3.02□□□□□ -1.93
NUP88Q99567 MIR549A-201ENST00000385268 96 ntBASIC3.02□□□□□ -1.93
NUP88Q99567 AC114482.1-201ENST00000418010 247 ntBASIC3.02□□□□□ -1.93
NUP88Q99567 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.02□□□□□ -1.93
NUP88Q99567 AC096644.2-201ENST00000429278 159 ntBASIC3.02□□□□□ -1.93
NUP88Q99567 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.02□□□□□ -1.93
NUP88Q99567 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.02□□□□□ -1.93
NUP88Q99567 RPL39P40-201ENST00000445481 146 ntBASIC3.02□□□□□ -1.93
NUP88Q99567 AC104389.3-201ENST00000445629 235 ntBASIC3.02□□□□□ -1.93
NUP88Q99567 RN7SL499P-201ENST00000481141 276 ntBASIC3.02□□□□□ -1.93
NUP88Q99567 RNA5SP320-201ENST00000516263 124 ntBASIC3.02□□□□□ -1.93
NUP88Q99567 RN7SKP295-201ENST00000517264 153 ntBASIC3.02□□□□□ -1.93
NUP88Q99567 RNU6-988P-201ENST00000519081 107 ntBASIC3.02□□□□□ -1.93
NUP88Q99567 EIF4A1P12-201ENST00000551910 141 ntBASIC3.02□□□□□ -1.93
NUP88Q99567 MIR3171-201ENST00000584270 74 ntBASIC3.02□□□□□ -1.93
NUP88Q99567 AC078899.3-201ENST00000599065 212 ntBASIC3.02□□□□□ -1.93
NUP88Q99567 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
NUP88Q99567 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.02□□□□□ -1.93
NUP88Q99567 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
NUP88Q99567 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.02□□□□□ -1.93
NUP88Q99567 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
NUP88Q99567 ZNF204P-201ENST00000416749 2397 ntBASIC3.01□□□□□ -1.93
NUP88Q99567 Y_RNA.31-201ENST00000362574 102 ntBASIC3.01□□□□□ -1.93
NUP88Q99567 Y_RNA.112-201ENST00000363250 102 ntBASIC3.01□□□□□ -1.93
NUP88Q99567 Y_RNA.364-201ENST00000365532 101 ntBASIC3.01□□□□□ -1.93
NUP88Q99567 RNU6-1227P-201ENST00000383981 107 ntBASIC3.01□□□□□ -1.93
NUP88Q99567 U8.10-201ENST00000384260 133 ntBASIC3.01□□□□□ -1.93
NUP88Q99567 SNORA67.4-201ENST00000384688 142 ntBASIC3.01□□□□□ -1.93
NUP88Q99567 RNA5SP201-201ENST00000410316 124 ntBASIC3.01□□□□□ -1.93
NUP88Q99567 RPS26P42-201ENST00000413485 326 ntBASIC3.01□□□□□ -1.93
NUP88Q99567 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
NUP88Q99567 AL137792.2-201ENST00000443484 235 ntBASIC3.01□□□□□ -1.93
NUP88Q99567 AP000870.1-201ENST00000472927 406 ntBASIC3.01□□□□□ -1.93
NUP88Q99567 RNA5SP282-201ENST00000516355 108 ntBASIC3.01□□□□□ -1.93
NUP88Q99567 AC091544.4-201ENST00000555268 342 ntBASIC3.01□□□□□ -1.93
NUP88Q99567 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.01□□□□□ -1.93
NUP88Q99567 AC083806.3-201ENST00000614016 455 ntBASIC3.01□□□□□ -1.93
NUP88Q99567 AL449363.1-201ENST00000617815 186 ntBASIC3.01□□□□□ -1.93
NUP88Q99567 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.01□□□□□ -1.93
NUP88Q99567 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
NUP88Q99567 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
NUP88Q99567 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3□□□□□ -1.93
NUP88Q99567 RNA5SP125-201ENST00000364843 120 ntBASIC3□□□□□ -1.93
NUP88Q99567 ANXA2P1-201ENST00000505539 926 ntBASIC3□□□□□ -1.93
NUP88Q99567 AC008413.1-201ENST00000511864 177 ntBASIC3□□□□□ -1.93
NUP88Q99567 AC109329.2-201ENST00000519658 482 ntBASIC3□□□□□ -1.93
NUP88Q99567 AC023442.1-201ENST00000531247 422 ntBASIC3□□□□□ -1.93
NUP88Q99567 MIR5695-201ENST00000579717 85 ntBASIC3□□□□□ -1.93
NUP88Q99567 AC005520.5-201ENST00000613926 164 ntBASIC3□□□□□ -1.93
NUP88Q99567 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3□□□□□ -1.93
NUP88Q99567 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3□□□□□ -1.93
NUP88Q99567 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
NUP88Q99567 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
NUP88Q99567 RNU6-874P-201ENST00000362390 105 ntBASIC2.99□□□□□ -1.93
NUP88Q99567 RNU6-944P-201ENST00000364023 107 ntBASIC2.99□□□□□ -1.93
NUP88Q99567 U8.9-201ENST00000365667 134 ntBASIC2.99□□□□□ -1.93
NUP88Q99567 MIR592-201ENST00000384959 97 ntBASIC2.99□□□□□ -1.93
NUP88Q99567 MIR1294-201ENST00000408503 142 ntBASIC2.99□□□□□ -1.93
NUP88Q99567 AC027124.2-201ENST00000428249 105 ntBASIC2.99□□□□□ -1.93
NUP88Q99567 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.99□□□□□ -1.93
NUP88Q99567 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.99□□□□□ -1.93
NUP88Q99567 RNU6-965P-201ENST00000516721 96 ntBASIC2.99□□□□□ -1.93
NUP88Q99567 RNA5SP54-201ENST00000516951 92 ntBASIC2.99□□□□□ -1.93
NUP88Q99567 AC022868.1-201ENST00000517767 391 ntBASIC2.99□□□□□ -1.93
NUP88Q99567 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.99□□□□□ -1.93
NUP88Q99567 HSBP1P1-201ENST00000555205 166 ntBASIC2.99□□□□□ -1.93
NUP88Q99567 UBL5P4-201ENST00000562584 236 ntBASIC2.99□□□□□ -1.93
NUP88Q99567 MIR4435-1-201ENST00000582552 80 ntBASIC2.99□□□□□ -1.93
NUP88Q99567 AC016727.2-201ENST00000603988 621 ntBASIC2.99□□□□□ -1.93
NUP88Q99567 AC007485.1-201ENST00000616755 206 ntBASIC2.99□□□□□ -1.93
NUP88Q99567 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.99□□□□□ -1.93
NUP88Q99567 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.99□□□□□ -1.93
NUP88Q99567 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
NUP88Q99567 RNA5SP289-201ENST00000362332 137 ntBASIC2.98□□□□□ -1.93
NUP88Q99567 Y_RNA.132-201ENST00000363421 102 ntBASIC2.98□□□□□ -1.93
NUP88Q99567 Y_RNA.202-201ENST00000364083 110 ntBASIC2.98□□□□□ -1.93
NUP88Q99567 Y_RNA.216-201ENST00000364205 93 ntBASIC2.98□□□□□ -1.93
NUP88Q99567 RNU4-42P-201ENST00000364738 142 ntBASIC2.98□□□□□ -1.93
NUP88Q99567 Y_RNA.496-201ENST00000384444 101 ntBASIC2.98□□□□□ -1.93
NUP88Q99567 MIR518C-201ENST00000384822 101 ntBASIC2.98□□□□□ -1.93
NUP88Q99567 RN7SKP284-201ENST00000411002 343 ntBASIC2.98□□□□□ -1.93
NUP88Q99567 RNA5SP508-201ENST00000411327 119 ntBASIC2.98□□□□□ -1.93
NUP88Q99567 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.98□□□□□ -1.93
NUP88Q99567 WARS2P1-201ENST00000429678 537 ntBASIC2.98□□□□□ -1.93
NUP88Q99567 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.98□□□□□ -1.93
NUP88Q99567 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.98□□□□□ -1.93
NUP88Q99567 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms