Protein–RNA interactions for Protein: Q99250

SCN2A, Sodium channel protein type 2 subunit alpha, humanhuman

Predictions only

Length 2,005 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2AQ99250 RNU6-997P-201ENST00000384725 107 ntBASIC1.52□□□□□ -2.17
SCN2AQ99250 RPL30P4-201ENST00000429309 333 ntBASIC1.52□□□□□ -2.17
SCN2AQ99250 AL589823.1-201ENST00000429577 183 ntBASIC1.52□□□□□ -2.17
SCN2AQ99250 MTCO1P29-201ENST00000496868 288 ntBASIC1.52□□□□□ -2.17
SCN2AQ99250 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.52□□□□□ -2.17
SCN2AQ99250 RNU6-1088P-201ENST00000516850 104 ntBASIC1.52□□□□□ -2.17
SCN2AQ99250 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.52□□□□□ -2.17
SCN2AQ99250 CBX3P7-201ENST00000532876 502 ntBASIC1.52□□□□□ -2.17
SCN2AQ99250 AC025423.5-201ENST00000550230 219 ntBASIC1.52□□□□□ -2.17
SCN2AQ99250 AL031274.2-201ENST00000599419 203 ntBASIC1.52□□□□□ -2.17
SCN2AQ99250 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.52□□□□□ -2.17
SCN2AQ99250 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
SCN2AQ99250 MIR514A2-201ENST00000385131 88 ntBASIC1.52□□□□□ -2.17
SCN2AQ99250 MIR514A3-201ENST00000385132 88 ntBASIC1.52□□□□□ -2.17
SCN2AQ99250 AL512604.1-201ENST00000404812 257 ntBASIC1.52□□□□□ -2.17
SCN2AQ99250 EIF1P1-201ENST00000421436 341 ntBASIC1.52□□□□□ -2.17
SCN2AQ99250 BX510359.4-201ENST00000423750 193 ntBASIC1.52□□□□□ -2.17
SCN2AQ99250 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.52□□□□□ -2.17
SCN2AQ99250 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.52□□□□□ -2.17
SCN2AQ99250 GPM6BP3-201ENST00000442797 145 ntBASIC1.52□□□□□ -2.17
SCN2AQ99250 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.52□□□□□ -2.17
SCN2AQ99250 PRELID3BP1-201ENST00000457142 540 ntBASIC1.52□□□□□ -2.17
SCN2AQ99250 AC005840.1-201ENST00000498412 377 ntBASIC1.52□□□□□ -2.17
SCN2AQ99250 SNORA48.11-201ENST00000517015 89 ntBASIC1.52□□□□□ -2.17
SCN2AQ99250 AC115990.1-201ENST00000526957 301 ntBASIC1.52□□□□□ -2.17
SCN2AQ99250 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.52□□□□□ -2.17
SCN2AQ99250 AC009994.1-201ENST00000606889 253 ntBASIC1.52□□□□□ -2.17
SCN2AQ99250 RMST_6.1-201ENST00000611980 203 ntBASIC1.52□□□□□ -2.17
SCN2AQ99250 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
SCN2AQ99250 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.51□□□□□ -2.17
SCN2AQ99250 AC233981.2-201ENST00000611524 1614 ntBASIC1.51□□□□□ -2.17
SCN2AQ99250 RNU6-1303P-201ENST00000364841 107 ntBASIC1.51□□□□□ -2.17
SCN2AQ99250 RNU4-20P-201ENST00000365601 151 ntBASIC1.51□□□□□ -2.17
SCN2AQ99250 Y_RNA.466-201ENST00000384294 113 ntBASIC1.51□□□□□ -2.17
SCN2AQ99250 SNORD14D-201ENST00000384390 87 ntBASIC1.51□□□□□ -2.17
SCN2AQ99250 RNU1-148P-201ENST00000384472 162 ntBASIC1.51□□□□□ -2.17
SCN2AQ99250 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.51□□□□□ -2.17
SCN2AQ99250 AC007547.1-201ENST00000462177 490 ntBASIC1.51□□□□□ -2.17
SCN2AQ99250 AC011352.1-201ENST00000512300 793 ntBASIC1.51□□□□□ -2.17
SCN2AQ99250 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.51□□□□□ -2.17
SCN2AQ99250 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.51□□□□□ -2.17
SCN2AQ99250 RNU6-864P-201ENST00000516256 108 ntBASIC1.51□□□□□ -2.17
SCN2AQ99250 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.51□□□□□ -2.17
SCN2AQ99250 AP005639.2-201ENST00000527592 928 ntBASIC1.51□□□□□ -2.17
SCN2AQ99250 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.51□□□□□ -2.17
SCN2AQ99250 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.51□□□□□ -2.17
SCN2AQ99250 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.51□□□□□ -2.17
SCN2AQ99250 SNORA59B-202ENST00000578183 701 ntBASIC1.51□□□□□ -2.17
SCN2AQ99250 AL034555.1-201ENST00000604816 211 ntBASIC1.51□□□□□ -2.17
SCN2AQ99250 AC092794.1-201ENST00000612734 582 ntBASIC1.51□□□□□ -2.17
SCN2AQ99250 AL136221.1-201ENST00000621449 509 ntBASIC1.51□□□□□ -2.17
SCN2AQ99250 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.51□□□□□ -2.17
SCN2AQ99250 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.51□□□□□ -2.17
SCN2AQ99250 MTND5P9-201ENST00000503854 1755 ntBASIC1.51□□□□□ -2.17
SCN2AQ99250 Y_RNA.191-201ENST00000363972 113 ntBASIC1.5□□□□□ -2.17
SCN2AQ99250 Y_RNA.269-201ENST00000364685 89 ntBASIC1.5□□□□□ -2.17
SCN2AQ99250 RNU6-1329P-201ENST00000365664 107 ntBASIC1.5□□□□□ -2.17
SCN2AQ99250 SNORA32.2-201ENST00000384049 122 ntBASIC1.5□□□□□ -2.17
SCN2AQ99250 RNU6-378P-201ENST00000384324 107 ntBASIC1.5□□□□□ -2.17
SCN2AQ99250 Y_RNA.530-201ENST00000384587 101 ntBASIC1.5□□□□□ -2.17
SCN2AQ99250 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.5□□□□□ -2.17
SCN2AQ99250 AC007395.1-201ENST00000451333 677 ntBASIC1.5□□□□□ -2.17
SCN2AQ99250 MTCO2P30-201ENST00000503662 364 ntBASIC1.5□□□□□ -2.17
SCN2AQ99250 AC093259.1-201ENST00000509755 300 ntBASIC1.5□□□□□ -2.17
SCN2AQ99250 MRPS17P9-201ENST00000511924 393 ntBASIC1.5□□□□□ -2.17
SCN2AQ99250 MIR449C-201ENST00000516047 92 ntBASIC1.5□□□□□ -2.17
SCN2AQ99250 RNU7-30P-201ENST00000516835 62 ntBASIC1.5□□□□□ -2.17
SCN2AQ99250 RNU6-835P-201ENST00000516974 104 ntBASIC1.5□□□□□ -2.17
SCN2AQ99250 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.5□□□□□ -2.17
SCN2AQ99250 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.5□□□□□ -2.17
SCN2AQ99250 AL359821.1-201ENST00000605519 182 ntBASIC1.5□□□□□ -2.17
SCN2AQ99250 AF250324.2-201ENST00000608299 610 ntBASIC1.5□□□□□ -2.17
SCN2AQ99250 SCARNA4-201ENST00000629045 128 ntBASIC1.5□□□□□ -2.17
SCN2AQ99250 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
SCN2AQ99250 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
SCN2AQ99250 RNU6-212P-201ENST00000362642 104 ntBASIC1.5□□□□□ -2.17
SCN2AQ99250 RNU6-562P-201ENST00000362731 107 ntBASIC1.5□□□□□ -2.17
SCN2AQ99250 Y_RNA.116-201ENST00000363292 103 ntBASIC1.5□□□□□ -2.17
SCN2AQ99250 RNU6-1032P-201ENST00000384100 107 ntBASIC1.5□□□□□ -2.17
SCN2AQ99250 RNU6-611P-201ENST00000384276 104 ntBASIC1.5□□□□□ -2.17
SCN2AQ99250 AL133475.1-201ENST00000404414 305 ntBASIC1.5□□□□□ -2.17
SCN2AQ99250 RNU6-908P-201ENST00000410160 94 ntBASIC1.5□□□□□ -2.17
SCN2AQ99250 VN1R36P-201ENST00000414936 291 ntBASIC1.5□□□□□ -2.17
SCN2AQ99250 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.5□□□□□ -2.17
SCN2AQ99250 RPL39P29-201ENST00000447779 157 ntBASIC1.5□□□□□ -2.17
SCN2AQ99250 MTND1P17-201ENST00000448961 204 ntBASIC1.5□□□□□ -2.17
SCN2AQ99250 CYP2C59P-201ENST00000457790 269 ntBASIC1.5□□□□□ -2.17
SCN2AQ99250 AC069439.1-201ENST00000494739 167 ntBASIC1.5□□□□□ -2.17
SCN2AQ99250 RPS23P5-201ENST00000495419 428 ntBASIC1.5□□□□□ -2.17
SCN2AQ99250 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.5□□□□□ -2.17
SCN2AQ99250 Y_RNA.675-201ENST00000516389 149 ntBASIC1.5□□□□□ -2.17
SCN2AQ99250 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.5□□□□□ -2.17
SCN2AQ99250 AC015720.1-201ENST00000565251 277 ntBASIC1.5□□□□□ -2.17
SCN2AQ99250 MIR5696-201ENST00000578474 85 ntBASIC1.5□□□□□ -2.17
SCN2AQ99250 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.5□□□□□ -2.17
SCN2AQ99250 uc_338.5-201ENST00000611839 155 ntBASIC1.5□□□□□ -2.17
SCN2AQ99250 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.5□□□□□ -2.17
SCN2AQ99250 AC009033.1-201ENST00000624279 431 ntBASIC1.5□□□□□ -2.17
SCN2AQ99250 AL450472.1-202ENST00000637286 180 ntBASIC1.5□□□□□ -2.17
SCN2AQ99250 RNU6-845P-201ENST00000362578 103 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms