Protein–RNA interactions for Protein: Q96DZ5

CLIP3, CAP-Gly domain-containing linker protein 3, humanhuman

Predictions only

Length 547 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3Q96DZ5 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.26□□□□□ -1.89
CLIP3Q96DZ5 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.26□□□□□ -1.89
CLIP3Q96DZ5 AC005002.2-201ENST00000438228 269 ntBASIC3.26□□□□□ -1.89
CLIP3Q96DZ5 SNRPGP7-201ENST00000469016 106 ntBASIC3.26□□□□□ -1.89
CLIP3Q96DZ5 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.26□□□□□ -1.89
CLIP3Q96DZ5 RN7SL807P-201ENST00000470923 297 ntBASIC3.26□□□□□ -1.89
CLIP3Q96DZ5 RPL23AP75-201ENST00000491601 451 ntBASIC3.26□□□□□ -1.89
CLIP3Q96DZ5 SNORA74D-201ENST00000516404 141 ntBASIC3.26□□□□□ -1.89
CLIP3Q96DZ5 AC115990.1-201ENST00000526957 301 ntBASIC3.26□□□□□ -1.89
CLIP3Q96DZ5 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.26□□□□□ -1.89
CLIP3Q96DZ5 MZT1P2-201ENST00000604387 248 ntBASIC3.26□□□□□ -1.89
CLIP3Q96DZ5 SCARNA4-201ENST00000629045 128 ntBASIC3.26□□□□□ -1.89
CLIP3Q96DZ5 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CLIP3Q96DZ5 Z83843.1-201ENST00000604070 3685 ntBASIC3.25□□□□□ -1.89
CLIP3Q96DZ5 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.25□□□□□ -1.89
CLIP3Q96DZ5 RNU6-283P-201ENST00000364788 107 ntBASIC3.25□□□□□ -1.89
CLIP3Q96DZ5 Y_RNA.292-201ENST00000364904 97 ntBASIC3.25□□□□□ -1.89
CLIP3Q96DZ5 RNU6-326P-201ENST00000365480 107 ntBASIC3.25□□□□□ -1.89
CLIP3Q96DZ5 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CLIP3Q96DZ5 RN7SKP61-201ENST00000410642 295 ntBASIC3.25□□□□□ -1.89
CLIP3Q96DZ5 RN7SKP51-201ENST00000410781 304 ntBASIC3.25□□□□□ -1.89
CLIP3Q96DZ5 AL139281.1-201ENST00000422120 335 ntBASIC3.25□□□□□ -1.89
CLIP3Q96DZ5 AC005326.1-201ENST00000429197 123 ntBASIC3.25□□□□□ -1.89
CLIP3Q96DZ5 AC104332.2-201ENST00000429959 156 ntBASIC3.25□□□□□ -1.89
CLIP3Q96DZ5 RPS15AP7-201ENST00000439294 405 ntBASIC3.25□□□□□ -1.89
CLIP3Q96DZ5 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.25□□□□□ -1.89
CLIP3Q96DZ5 snoU13.14-201ENST00000459372 104 ntBASIC3.25□□□□□ -1.89
CLIP3Q96DZ5 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.25□□□□□ -1.89
CLIP3Q96DZ5 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.25□□□□□ -1.89
CLIP3Q96DZ5 MIR4423-201ENST00000580922 80 ntBASIC3.25□□□□□ -1.89
CLIP3Q96DZ5 MIR4282-201ENST00000583613 67 ntBASIC3.25□□□□□ -1.89
CLIP3Q96DZ5 MIR4276-201ENST00000584832 70 ntBASIC3.25□□□□□ -1.89
CLIP3Q96DZ5 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.25□□□□□ -1.89
CLIP3Q96DZ5 AC072026.1-201ENST00000605023 201 ntBASIC3.25□□□□□ -1.89
CLIP3Q96DZ5 RPL23AP88-201ENST00000605759 454 ntBASIC3.25□□□□□ -1.89
CLIP3Q96DZ5 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CLIP3Q96DZ5 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CLIP3Q96DZ5 MFSD8-233ENST00000641482 4860 ntBASIC3.25□□□□□ -1.89
CLIP3Q96DZ5 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CLIP3Q96DZ5 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CLIP3Q96DZ5 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.24□□□□□ -1.89
CLIP3Q96DZ5 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.24□□□□□ -1.89
CLIP3Q96DZ5 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CLIP3Q96DZ5 RNU6-529P-201ENST00000363383 104 ntBASIC3.24□□□□□ -1.89
CLIP3Q96DZ5 RNU6-1285P-201ENST00000363480 105 ntBASIC3.24□□□□□ -1.89
CLIP3Q96DZ5 MIR186-201ENST00000384988 86 ntBASIC3.24□□□□□ -1.89
CLIP3Q96DZ5 AC078809.1-201ENST00000427601 140 ntBASIC3.24□□□□□ -1.89
CLIP3Q96DZ5 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.24□□□□□ -1.89
CLIP3Q96DZ5 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.24□□□□□ -1.89
CLIP3Q96DZ5 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.24□□□□□ -1.89
CLIP3Q96DZ5 AC016700.2-201ENST00000446011 156 ntBASIC3.24□□□□□ -1.89
CLIP3Q96DZ5 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.24□□□□□ -1.89
CLIP3Q96DZ5 RPS29P26-201ENST00000477483 171 ntBASIC3.24□□□□□ -1.89
CLIP3Q96DZ5 RPL30P1-201ENST00000488676 339 ntBASIC3.24□□□□□ -1.89
CLIP3Q96DZ5 RNU6-346P-201ENST00000516288 111 ntBASIC3.24□□□□□ -1.89
CLIP3Q96DZ5 SCARNA3-201ENST00000517097 143 ntBASIC3.24□□□□□ -1.89
CLIP3Q96DZ5 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.24□□□□□ -1.89
CLIP3Q96DZ5 HSPE1P4-201ENST00000550617 308 ntBASIC3.24□□□□□ -1.89
CLIP3Q96DZ5 MIR3200-201ENST00000580767 85 ntBASIC3.24□□□□□ -1.89
CLIP3Q96DZ5 AL162424.1-201ENST00000602325 221 ntBASIC3.24□□□□□ -1.89
CLIP3Q96DZ5 AL162713.1-201ENST00000604480 262 ntBASIC3.24□□□□□ -1.89
CLIP3Q96DZ5 MIR3651-201ENST00000630427 90 ntBASIC3.24□□□□□ -1.89
CLIP3Q96DZ5 AL161431.1-201ENST00000618966 4205 ntBASIC3.24□□□□□ -1.89
CLIP3Q96DZ5 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CLIP3Q96DZ5 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.24□□□□□ -1.89
CLIP3Q96DZ5 AC008264.2-201ENST00000610193 3731 ntBASIC3.23□□□□□ -1.89
CLIP3Q96DZ5 AC233981.2-201ENST00000611524 1614 ntBASIC3.23□□□□□ -1.89
CLIP3Q96DZ5 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.23□□□□□ -1.89
CLIP3Q96DZ5 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
CLIP3Q96DZ5 RNU6-704P-201ENST00000364162 103 ntBASIC3.23□□□□□ -1.89
CLIP3Q96DZ5 RNU6-926P-201ENST00000384075 107 ntBASIC3.23□□□□□ -1.89
CLIP3Q96DZ5 RNU1-139P-201ENST00000391307 165 ntBASIC3.23□□□□□ -1.89
CLIP3Q96DZ5 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
CLIP3Q96DZ5 AL033519.2-201ENST00000403958 392 ntBASIC3.23□□□□□ -1.89
CLIP3Q96DZ5 RN7SKP220-201ENST00000410611 288 ntBASIC3.23□□□□□ -1.89
CLIP3Q96DZ5 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.23□□□□□ -1.89
CLIP3Q96DZ5 EIF1AXP1-201ENST00000419267 435 ntBASIC3.23□□□□□ -1.89
CLIP3Q96DZ5 AC244670.1-201ENST00000436879 112 ntBASIC3.23□□□□□ -1.89
CLIP3Q96DZ5 AC109925.1-201ENST00000478069 331 ntBASIC3.23□□□□□ -1.89
CLIP3Q96DZ5 RPL26P26-201ENST00000480251 434 ntBASIC3.23□□□□□ -1.89
CLIP3Q96DZ5 AC016632.1-201ENST00000503994 196 ntBASIC3.23□□□□□ -1.89
CLIP3Q96DZ5 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.23□□□□□ -1.89
CLIP3Q96DZ5 RNU7-200P-201ENST00000516105 62 ntBASIC3.23□□□□□ -1.89
CLIP3Q96DZ5 RNU6-1278P-201ENST00000516130 107 ntBASIC3.23□□□□□ -1.89
CLIP3Q96DZ5 MTND5P41-201ENST00000517498 206 ntBASIC3.23□□□□□ -1.89
CLIP3Q96DZ5 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.23□□□□□ -1.89
CLIP3Q96DZ5 MIR3199-1-201ENST00000582434 88 ntBASIC3.23□□□□□ -1.89
CLIP3Q96DZ5 AC068647.1-201ENST00000489539 2265 ntBASIC3.23□□□□□ -1.89
CLIP3Q96DZ5 AC026241.1-201ENST00000517873 2142 ntBASIC3.23□□□□□ -1.89
CLIP3Q96DZ5 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CLIP3Q96DZ5 AC080128.1-201ENST00000474389 1917 ntBASIC3.23□□□□□ -1.89
CLIP3Q96DZ5 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
CLIP3Q96DZ5 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CLIP3Q96DZ5 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CLIP3Q96DZ5 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CLIP3Q96DZ5 AC092268.1-201ENST00000342691 405 ntBASIC3.22□□□□□ -1.89
CLIP3Q96DZ5 Y_RNA.40-201ENST00000362645 93 ntBASIC3.22□□□□□ -1.89
CLIP3Q96DZ5 SNORD115-32-201ENST00000364079 82 ntBASIC3.22□□□□□ -1.89
CLIP3Q96DZ5 SNORD50.2-201ENST00000365465 70 ntBASIC3.22□□□□□ -1.89
CLIP3Q96DZ5 MIR613-201ENST00000385248 95 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 176.7 ms