Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 U2.16-201ENST00000613119 191 ntBASIC1.91□□□□□ -2.1
SNRNP40Q96DI7 U2.12-201ENST00000613778 191 ntBASIC1.91□□□□□ -2.1
SNRNP40Q96DI7 U2.20-201ENST00000613956 192 ntBASIC1.91□□□□□ -2.1
SNRNP40Q96DI7 U2.9-201ENST00000615427 191 ntBASIC1.91□□□□□ -2.1
SNRNP40Q96DI7 U2.11-201ENST00000616345 191 ntBASIC1.91□□□□□ -2.1
SNRNP40Q96DI7 U2.2-201ENST00000616535 191 ntBASIC1.91□□□□□ -2.1
SNRNP40Q96DI7 U2.3-201ENST00000617785 191 ntBASIC1.91□□□□□ -2.1
SNRNP40Q96DI7 U2.19-201ENST00000618602 191 ntBASIC1.91□□□□□ -2.1
SNRNP40Q96DI7 RNU2-1-201ENST00000618664 191 ntBASIC1.91□□□□□ -2.1
SNRNP40Q96DI7 U2.6-201ENST00000619225 191 ntBASIC1.91□□□□□ -2.1
SNRNP40Q96DI7 U2.5-201ENST00000619465 191 ntBASIC1.91□□□□□ -2.1
SNRNP40Q96DI7 U2.10-201ENST00000620268 191 ntBASIC1.91□□□□□ -2.1
SNRNP40Q96DI7 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.91□□□□□ -2.1
SNRNP40Q96DI7 AC006504.8-201ENST00000621046 635 ntBASIC1.91□□□□□ -2.1
SNRNP40Q96DI7 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.91□□□□□ -2.1
SNRNP40Q96DI7 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
SNRNP40Q96DI7 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.9□□□□□ -2.11
SNRNP40Q96DI7 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
SNRNP40Q96DI7 Y_RNA.414-201ENST00000384011 101 ntBASIC1.9□□□□□ -2.11
SNRNP40Q96DI7 MIR583-201ENST00000384846 75 ntBASIC1.9□□□□□ -2.11
SNRNP40Q96DI7 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
SNRNP40Q96DI7 SNORA48.3-201ENST00000391081 134 ntBASIC1.9□□□□□ -2.11
SNRNP40Q96DI7 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
SNRNP40Q96DI7 AC019129.1-201ENST00000403786 261 ntBASIC1.9□□□□□ -2.11
SNRNP40Q96DI7 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.9□□□□□ -2.11
SNRNP40Q96DI7 RNU6-1148P-201ENST00000410992 104 ntBASIC1.9□□□□□ -2.11
SNRNP40Q96DI7 SNRPEP8-201ENST00000442866 260 ntBASIC1.9□□□□□ -2.11
SNRNP40Q96DI7 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.9□□□□□ -2.11
SNRNP40Q96DI7 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.9□□□□□ -2.11
SNRNP40Q96DI7 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.9□□□□□ -2.11
SNRNP40Q96DI7 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.9□□□□□ -2.11
SNRNP40Q96DI7 snoU13.6-201ENST00000458785 104 ntBASIC1.9□□□□□ -2.11
SNRNP40Q96DI7 RPS29P27-201ENST00000463711 170 ntBASIC1.9□□□□□ -2.11
SNRNP40Q96DI7 RNU6-1314P-201ENST00000517139 104 ntBASIC1.9□□□□□ -2.11
SNRNP40Q96DI7 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
SNRNP40Q96DI7 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.9□□□□□ -2.11
SNRNP40Q96DI7 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.9□□□□□ -2.11
SNRNP40Q96DI7 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.9□□□□□ -2.11
SNRNP40Q96DI7 MIR4299-201ENST00000577899 72 ntBASIC1.9□□□□□ -2.11
SNRNP40Q96DI7 AP000907.4-201ENST00000604143 237 ntBASIC1.9□□□□□ -2.11
SNRNP40Q96DI7 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
SNRNP40Q96DI7 AL773524.1-201ENST00000614065 229 ntBASIC1.9□□□□□ -2.11
SNRNP40Q96DI7 U6atac.1-201ENST00000616025 117 ntBASIC1.9□□□□□ -2.11
SNRNP40Q96DI7 AC005296.1-201ENST00000616145 209 ntBASIC1.9□□□□□ -2.11
SNRNP40Q96DI7 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.9□□□□□ -2.11
SNRNP40Q96DI7 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.9□□□□□ -2.11
SNRNP40Q96DI7 AC005336.3-201ENST00000623833 2679 ntBASIC1.9□□□□□ -2.11
SNRNP40Q96DI7 AL359851.1-201ENST00000569460 4997 ntBASIC1.89□□□□□ -2.11
SNRNP40Q96DI7 MTND4P5-201ENST00000435821 1374 ntBASIC1.89□□□□□ -2.11
SNRNP40Q96DI7 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
SNRNP40Q96DI7 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
SNRNP40Q96DI7 RNA5SP212-201ENST00000391223 107 ntBASIC1.89□□□□□ -2.11
SNRNP40Q96DI7 VN1R36P-201ENST00000414936 291 ntBASIC1.89□□□□□ -2.11
SNRNP40Q96DI7 AC123900.1-201ENST00000420390 96 ntBASIC1.89□□□□□ -2.11
SNRNP40Q96DI7 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.89□□□□□ -2.11
SNRNP40Q96DI7 MTCO3P18-201ENST00000440206 761 ntBASIC1.89□□□□□ -2.11
SNRNP40Q96DI7 RNU6-1098P-201ENST00000516772 96 ntBASIC1.89□□□□□ -2.11
SNRNP40Q96DI7 CPDP1-201ENST00000579660 283 ntBASIC1.89□□□□□ -2.11
SNRNP40Q96DI7 MIR8076-201ENST00000611401 83 ntBASIC1.89□□□□□ -2.11
SNRNP40Q96DI7 AC005520.5-201ENST00000613926 164 ntBASIC1.89□□□□□ -2.11
SNRNP40Q96DI7 AL138726.1-201ENST00000614873 333 ntBASIC1.89□□□□□ -2.11
SNRNP40Q96DI7 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
SNRNP40Q96DI7 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SNRNP40Q96DI7 LINC02555-201ENST00000563933 1951 ntBASIC1.89□□□□□ -2.11
SNRNP40Q96DI7 AC009487.4-201ENST00000624969 3585 ntBASIC1.88□□□□□ -2.11
SNRNP40Q96DI7 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SNRNP40Q96DI7 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
SNRNP40Q96DI7 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
SNRNP40Q96DI7 RNA5SP493-201ENST00000364115 91 ntBASIC1.88□□□□□ -2.11
SNRNP40Q96DI7 Y_RNA.332-201ENST00000365271 113 ntBASIC1.88□□□□□ -2.11
SNRNP40Q96DI7 SNORA32.2-201ENST00000384049 122 ntBASIC1.88□□□□□ -2.11
SNRNP40Q96DI7 SNORA29-201ENST00000384183 140 ntBASIC1.88□□□□□ -2.11
SNRNP40Q96DI7 Y_RNA.595-201ENST00000410403 105 ntBASIC1.88□□□□□ -2.11
SNRNP40Q96DI7 RPL23AP36-201ENST00000413895 458 ntBASIC1.88□□□□□ -2.11
SNRNP40Q96DI7 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
SNRNP40Q96DI7 AC009161.1-201ENST00000417306 376 ntBASIC1.88□□□□□ -2.11
SNRNP40Q96DI7 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.88□□□□□ -2.11
SNRNP40Q96DI7 AC244636.1-201ENST00000421152 228 ntBASIC1.88□□□□□ -2.11
SNRNP40Q96DI7 AL645568.3-201ENST00000433683 316 ntBASIC1.88□□□□□ -2.11
SNRNP40Q96DI7 USP9YP28-201ENST00000435142 589 ntBASIC1.88□□□□□ -2.11
SNRNP40Q96DI7 AL353572.1-201ENST00000442490 417 ntBASIC1.88□□□□□ -2.11
SNRNP40Q96DI7 AL035666.1-201ENST00000446195 348 ntBASIC1.88□□□□□ -2.11
SNRNP40Q96DI7 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.88□□□□□ -2.11
SNRNP40Q96DI7 AC069439.1-201ENST00000494739 167 ntBASIC1.88□□□□□ -2.11
SNRNP40Q96DI7 MRPS17P9-201ENST00000511924 393 ntBASIC1.88□□□□□ -2.11
SNRNP40Q96DI7 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.88□□□□□ -2.11
SNRNP40Q96DI7 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.88□□□□□ -2.11
SNRNP40Q96DI7 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.88□□□□□ -2.11
SNRNP40Q96DI7 FGF7P1-201ENST00000582820 288 ntBASIC1.88□□□□□ -2.11
SNRNP40Q96DI7 AC023043.2-201ENST00000589678 1026 ntBASIC1.88□□□□□ -2.11
SNRNP40Q96DI7 AC009994.1-201ENST00000606889 253 ntBASIC1.88□□□□□ -2.11
SNRNP40Q96DI7 AL590240.4-201ENST00000616908 390 ntBASIC1.88□□□□□ -2.11
SNRNP40Q96DI7 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.88□□□□□ -2.11
SNRNP40Q96DI7 AC091932.3-201ENST00000624223 323 ntBASIC1.88□□□□□ -2.11
SNRNP40Q96DI7 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
SNRNP40Q96DI7 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.88□□□□□ -2.11
SNRNP40Q96DI7 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SNRNP40Q96DI7 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.87□□□□□ -2.11
SNRNP40Q96DI7 MIRLET7G-201ENST00000362280 84 ntBASIC1.87□□□□□ -2.11
SNRNP40Q96DI7 Y_RNA.212-201ENST00000364177 102 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms