Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 SNORA80A-201ENST00000363922 136 ntBASIC2.02□□□□□ -2.09
RFT1Q96AA3 RNU6-214P-201ENST00000384130 107 ntBASIC2.02□□□□□ -2.09
RFT1Q96AA3 RNU6-842P-201ENST00000384269 107 ntBASIC2.02□□□□□ -2.09
RFT1Q96AA3 HMGN2P39-201ENST00000398005 273 ntBASIC2.02□□□□□ -2.09
RFT1Q96AA3 MTCYBP4-201ENST00000401524 249 ntBASIC2.02□□□□□ -2.09
RFT1Q96AA3 AL359511.1-201ENST00000402970 211 ntBASIC2.02□□□□□ -2.09
RFT1Q96AA3 MIR548P-201ENST00000408336 84 ntBASIC2.02□□□□□ -2.09
RFT1Q96AA3 RNA5SP201-201ENST00000410316 124 ntBASIC2.02□□□□□ -2.09
RFT1Q96AA3 Y_RNA.594-201ENST00000410373 140 ntBASIC2.02□□□□□ -2.09
RFT1Q96AA3 Z92545.1-201ENST00000411782 234 ntBASIC2.02□□□□□ -2.09
RFT1Q96AA3 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.02□□□□□ -2.09
RFT1Q96AA3 USP9YP30-201ENST00000430729 455 ntBASIC2.02□□□□□ -2.09
RFT1Q96AA3 AC236972.2-201ENST00000434979 310 ntBASIC2.02□□□□□ -2.09
RFT1Q96AA3 FTH1P25-201ENST00000447665 469 ntBASIC2.02□□□□□ -2.09
RFT1Q96AA3 RPL30P15-201ENST00000457129 321 ntBASIC2.02□□□□□ -2.09
RFT1Q96AA3 MIR2053-201ENST00000459295 91 ntBASIC2.02□□□□□ -2.09
RFT1Q96AA3 AC145146.1-201ENST00000496370 254 ntBASIC2.02□□□□□ -2.09
RFT1Q96AA3 RNA5SP384-201ENST00000516615 116 ntBASIC2.02□□□□□ -2.09
RFT1Q96AA3 Y_RNA.711-201ENST00000516993 102 ntBASIC2.02□□□□□ -2.09
RFT1Q96AA3 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.02□□□□□ -2.09
RFT1Q96AA3 AC021269.2-201ENST00000532318 330 ntBASIC2.02□□□□□ -2.09
RFT1Q96AA3 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.02□□□□□ -2.09
RFT1Q96AA3 AC021231.3-201ENST00000558497 370 ntBASIC2.02□□□□□ -2.09
RFT1Q96AA3 AC026271.5-201ENST00000577873 130 ntBASIC2.02□□□□□ -2.09
RFT1Q96AA3 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.02□□□□□ -2.09
RFT1Q96AA3 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.02□□□□□ -2.09
RFT1Q96AA3 AC008749.1-201ENST00000597650 306 ntBASIC2.02□□□□□ -2.09
RFT1Q96AA3 AL031274.2-201ENST00000599419 203 ntBASIC2.02□□□□□ -2.09
RFT1Q96AA3 AL078605.1-201ENST00000603529 500 ntBASIC2.02□□□□□ -2.09
RFT1Q96AA3 AP000654.2-201ENST00000605633 586 ntBASIC2.02□□□□□ -2.09
RFT1Q96AA3 AC009229.3-201ENST00000608056 282 ntBASIC2.02□□□□□ -2.09
RFT1Q96AA3 Y_RNA.812-201ENST00000610788 101 ntBASIC2.02□□□□□ -2.09
RFT1Q96AA3 Y_RNA.784-201ENST00000613803 101 ntBASIC2.02□□□□□ -2.09
RFT1Q96AA3 AC040896.1-201ENST00000613819 479 ntBASIC2.02□□□□□ -2.09
RFT1Q96AA3 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.02□□□□□ -2.09
RFT1Q96AA3 MIR6817-201ENST00000615588 66 ntBASIC2.02□□□□□ -2.09
RFT1Q96AA3 Y_RNA.787-201ENST00000616522 101 ntBASIC2.02□□□□□ -2.09
RFT1Q96AA3 Y_RNA.780-201ENST00000617336 101 ntBASIC2.02□□□□□ -2.09
RFT1Q96AA3 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.02□□□□□ -2.09
RFT1Q96AA3 Y_RNA.801-201ENST00000619005 101 ntBASIC2.02□□□□□ -2.09
RFT1Q96AA3 AC090971.5-201ENST00000621102 293 ntBASIC2.02□□□□□ -2.09
RFT1Q96AA3 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
RFT1Q96AA3 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
RFT1Q96AA3 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
RFT1Q96AA3 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.01□□□□□ -2.09
RFT1Q96AA3 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
RFT1Q96AA3 RNU6-227P-201ENST00000362865 103 ntBASIC2.01□□□□□ -2.09
RFT1Q96AA3 Y_RNA.395-201ENST00000383945 109 ntBASIC2.01□□□□□ -2.09
RFT1Q96AA3 RNU6-128P-201ENST00000383976 107 ntBASIC2.01□□□□□ -2.09
RFT1Q96AA3 Y_RNA.431-201ENST00000384086 102 ntBASIC2.01□□□□□ -2.09
RFT1Q96AA3 RNU6-890P-201ENST00000384121 107 ntBASIC2.01□□□□□ -2.09
RFT1Q96AA3 Y_RNA.482-201ENST00000384377 111 ntBASIC2.01□□□□□ -2.09
RFT1Q96AA3 RNU6-331P-201ENST00000384724 107 ntBASIC2.01□□□□□ -2.09
RFT1Q96AA3 RNA5SP184-201ENST00000411071 108 ntBASIC2.01□□□□□ -2.09
RFT1Q96AA3 AC243428.1-201ENST00000421099 264 ntBASIC2.01□□□□□ -2.09
RFT1Q96AA3 AL139396.1-201ENST00000421137 167 ntBASIC2.01□□□□□ -2.09
RFT1Q96AA3 RPS15AP28-201ENST00000435088 386 ntBASIC2.01□□□□□ -2.09
RFT1Q96AA3 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.01□□□□□ -2.09
RFT1Q96AA3 AL109933.2-201ENST00000452651 260 ntBASIC2.01□□□□□ -2.09
RFT1Q96AA3 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.01□□□□□ -2.09
RFT1Q96AA3 ELOCP24-201ENST00000456370 334 ntBASIC2.01□□□□□ -2.09
RFT1Q96AA3 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.01□□□□□ -2.09
RFT1Q96AA3 AC116337.1-201ENST00000509680 687 ntBASIC2.01□□□□□ -2.09
RFT1Q96AA3 RNU6-1016P-201ENST00000516689 94 ntBASIC2.01□□□□□ -2.09
RFT1Q96AA3 AC016256.1-201ENST00000547971 354 ntBASIC2.01□□□□□ -2.09
RFT1Q96AA3 AC026371.1-201ENST00000551867 419 ntBASIC2.01□□□□□ -2.09
RFT1Q96AA3 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.01□□□□□ -2.09
RFT1Q96AA3 AC078795.3-201ENST00000602913 472 ntBASIC2.01□□□□□ -2.09
RFT1Q96AA3 AL360085.1-201ENST00000604713 532 ntBASIC2.01□□□□□ -2.09
RFT1Q96AA3 AL162373.1-201ENST00000620433 407 ntBASIC2.01□□□□□ -2.09
RFT1Q96AA3 uc_338.22-201ENST00000622722 187 ntBASIC2.01□□□□□ -2.09
RFT1Q96AA3 MIR1291-201ENST00000627649 87 ntBASIC2.01□□□□□ -2.09
RFT1Q96AA3 AC134503.1-201ENST00000633048 54 ntBASIC2.01□□□□□ -2.09
RFT1Q96AA3 AP000553.5-201ENST00000641933 54 ntBASIC2.01□□□□□ -2.09
RFT1Q96AA3 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
RFT1Q96AA3 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.01□□□□□ -2.09
RFT1Q96AA3 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
RFT1Q96AA3 Y_RNA.5-201ENST00000362334 102 ntBASIC2□□□□□ -2.09
RFT1Q96AA3 SNORA63-201ENST00000363450 132 ntBASIC2□□□□□ -2.09
RFT1Q96AA3 SNORA5B-201ENST00000363786 132 ntBASIC2□□□□□ -2.09
RFT1Q96AA3 RNA5SP68-201ENST00000363885 119 ntBASIC2□□□□□ -2.09
RFT1Q96AA3 SNORA63C-201ENST00000364578 129 ntBASIC2□□□□□ -2.09
RFT1Q96AA3 RNU4-56P-201ENST00000364700 142 ntBASIC2□□□□□ -2.09
RFT1Q96AA3 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
RFT1Q96AA3 MIR559-201ENST00000385188 96 ntBASIC2□□□□□ -2.09
RFT1Q96AA3 BTF3L4P2-201ENST00000392798 346 ntBASIC2□□□□□ -2.09
RFT1Q96AA3 SRIP3-201ENST00000413200 219 ntBASIC2□□□□□ -2.09
RFT1Q96AA3 MTCO2P27-201ENST00000420740 428 ntBASIC2□□□□□ -2.09
RFT1Q96AA3 MTND2P23-201ENST00000422990 651 ntBASIC2□□□□□ -2.09
RFT1Q96AA3 AL137792.2-201ENST00000443484 235 ntBASIC2□□□□□ -2.09
RFT1Q96AA3 AL137159.1-201ENST00000452808 512 ntBASIC2□□□□□ -2.09
RFT1Q96AA3 PRELID3BP1-201ENST00000457142 540 ntBASIC2□□□□□ -2.09
RFT1Q96AA3 U8.21-201ENST00000459536 136 ntBASIC2□□□□□ -2.09
RFT1Q96AA3 AC055731.1-201ENST00000474387 401 ntBASIC2□□□□□ -2.09
RFT1Q96AA3 RNU6-1137P-201ENST00000517073 99 ntBASIC2□□□□□ -2.09
RFT1Q96AA3 AC007375.1-201ENST00000554513 578 ntBASIC2□□□□□ -2.09
RFT1Q96AA3 AC007229.1-201ENST00000590455 412 ntBASIC2□□□□□ -2.09
RFT1Q96AA3 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2□□□□□ -2.09
RFT1Q96AA3 AC011494.1-201ENST00000596454 237 ntBASIC2□□□□□ -2.09
RFT1Q96AA3 Z98751.3-201ENST00000604447 521 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms