Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 RN7SL297P-201ENST00000483161 293 ntBASIC2.99□□□□□ -1.93
HPS3Q969F9 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.99□□□□□ -1.93
HPS3Q969F9 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.99□□□□□ -1.93
HPS3Q969F9 SNORA9.3-201ENST00000516383 129 ntBASIC2.99□□□□□ -1.93
HPS3Q969F9 MIR2355-201ENST00000517199 87 ntBASIC2.99□□□□□ -1.93
HPS3Q969F9 HSPE1P18-201ENST00000517602 280 ntBASIC2.99□□□□□ -1.93
HPS3Q969F9 AP003072.1-201ENST00000531740 145 ntBASIC2.99□□□□□ -1.93
HPS3Q969F9 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.99□□□□□ -1.93
HPS3Q969F9 AC090617.3-201ENST00000573670 475 ntBASIC2.99□□□□□ -1.93
HPS3Q969F9 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.99□□□□□ -1.93
HPS3Q969F9 AL356575.1-201ENST00000603008 283 ntBASIC2.99□□□□□ -1.93
HPS3Q969F9 Y_RNA.812-201ENST00000610788 101 ntBASIC2.99□□□□□ -1.93
HPS3Q969F9 Y_RNA.784-201ENST00000613803 101 ntBASIC2.99□□□□□ -1.93
HPS3Q969F9 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.99□□□□□ -1.93
HPS3Q969F9 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.99□□□□□ -1.93
HPS3Q969F9 Y_RNA.787-201ENST00000616522 101 ntBASIC2.99□□□□□ -1.93
HPS3Q969F9 Y_RNA.780-201ENST00000617336 101 ntBASIC2.99□□□□□ -1.93
HPS3Q969F9 Y_RNA.801-201ENST00000619005 101 ntBASIC2.99□□□□□ -1.93
HPS3Q969F9 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.99□□□□□ -1.93
HPS3Q969F9 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.98□□□□□ -1.93
HPS3Q969F9 SNORD115-8-201ENST00000363856 82 ntBASIC2.98□□□□□ -1.93
HPS3Q969F9 SNORD115-38-201ENST00000365037 82 ntBASIC2.98□□□□□ -1.93
HPS3Q969F9 SNORA22B-201ENST00000383876 138 ntBASIC2.98□□□□□ -1.93
HPS3Q969F9 Y_RNA.422-201ENST00000384054 114 ntBASIC2.98□□□□□ -1.93
HPS3Q969F9 RNU6-1032P-201ENST00000384100 107 ntBASIC2.98□□□□□ -1.93
HPS3Q969F9 MIR628-201ENST00000385229 95 ntBASIC2.98□□□□□ -1.93
HPS3Q969F9 RN7SKP284-201ENST00000411002 343 ntBASIC2.98□□□□□ -1.93
HPS3Q969F9 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.98□□□□□ -1.93
HPS3Q969F9 AL161788.1-201ENST00000441805 169 ntBASIC2.98□□□□□ -1.93
HPS3Q969F9 MTND4P19-201ENST00000446659 478 ntBASIC2.98□□□□□ -1.93
HPS3Q969F9 RNU7-169P-201ENST00000459456 61 ntBASIC2.98□□□□□ -1.93
HPS3Q969F9 RNA5SP367-201ENST00000516557 118 ntBASIC2.98□□□□□ -1.93
HPS3Q969F9 RNU6-58P-201ENST00000517143 103 ntBASIC2.98□□□□□ -1.93
HPS3Q969F9 GNAI2P1-201ENST00000541815 315 ntBASIC2.98□□□□□ -1.93
HPS3Q969F9 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.98□□□□□ -1.93
HPS3Q969F9 SNRPGP20-201ENST00000604477 205 ntBASIC2.98□□□□□ -1.93
HPS3Q969F9 AC087588.2-201ENST00000617667 426 ntBASIC2.98□□□□□ -1.93
HPS3Q969F9 AC007742.2-201ENST00000618226 398 ntBASIC2.98□□□□□ -1.93
HPS3Q969F9 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.98□□□□□ -1.93
HPS3Q969F9 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
HPS3Q969F9 MTND5P16-201ENST00000460269 1703 ntBASIC2.98□□□□□ -1.93
HPS3Q969F9 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.98□□□□□ -1.93
HPS3Q969F9 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
HPS3Q969F9 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HPS3Q969F9 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HPS3Q969F9 RNU6-874P-201ENST00000362390 105 ntBASIC2.97□□□□□ -1.93
HPS3Q969F9 RNU6-280P-201ENST00000364145 104 ntBASIC2.97□□□□□ -1.93
HPS3Q969F9 RNU4-42P-201ENST00000364738 142 ntBASIC2.97□□□□□ -1.93
HPS3Q969F9 Y_RNA.358-201ENST00000365491 99 ntBASIC2.97□□□□□ -1.93
HPS3Q969F9 Y_RNA.597-201ENST00000410463 100 ntBASIC2.97□□□□□ -1.93
HPS3Q969F9 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.97□□□□□ -1.93
HPS3Q969F9 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.97□□□□□ -1.93
HPS3Q969F9 AC007215.1-201ENST00000464893 276 ntBASIC2.97□□□□□ -1.93
HPS3Q969F9 RNA5SP356-201ENST00000515972 94 ntBASIC2.97□□□□□ -1.93
HPS3Q969F9 AC027288.2-201ENST00000553028 243 ntBASIC2.97□□□□□ -1.93
HPS3Q969F9 AC026470.2-201ENST00000561492 181 ntBASIC2.97□□□□□ -1.93
HPS3Q969F9 MIR3162-201ENST00000581818 82 ntBASIC2.97□□□□□ -1.93
HPS3Q969F9 MIR3124-201ENST00000582636 67 ntBASIC2.97□□□□□ -1.93
HPS3Q969F9 AC023043.3-201ENST00000593113 385 ntBASIC2.97□□□□□ -1.93
HPS3Q969F9 AC016925.2-201ENST00000605108 242 ntBASIC2.97□□□□□ -1.93
HPS3Q969F9 AC007485.1-201ENST00000616755 206 ntBASIC2.97□□□□□ -1.93
HPS3Q969F9 AL606534.2-204ENST00000635008 178 ntBASIC2.97□□□□□ -1.93
HPS3Q969F9 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HPS3Q969F9 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HPS3Q969F9 Y_RNA.326-201ENST00000365176 113 ntBASIC2.96□□□□□ -1.94
HPS3Q969F9 RNU6-1274P-201ENST00000384557 107 ntBASIC2.96□□□□□ -1.94
HPS3Q969F9 Y_RNA.592-201ENST00000410274 109 ntBASIC2.96□□□□□ -1.94
HPS3Q969F9 CBX3P6-201ENST00000430257 527 ntBASIC2.96□□□□□ -1.94
HPS3Q969F9 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.96□□□□□ -1.94
HPS3Q969F9 AC105272.1-201ENST00000438604 198 ntBASIC2.96□□□□□ -1.94
HPS3Q969F9 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.96□□□□□ -1.94
HPS3Q969F9 AP000870.1-201ENST00000472927 406 ntBASIC2.96□□□□□ -1.94
HPS3Q969F9 RNU6-1114P-201ENST00000516022 107 ntBASIC2.96□□□□□ -1.94
HPS3Q969F9 RNU6-911P-201ENST00000516523 104 ntBASIC2.96□□□□□ -1.94
HPS3Q969F9 RN7SKP40-201ENST00000517211 242 ntBASIC2.96□□□□□ -1.94
HPS3Q969F9 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HPS3Q969F9 HSBP1P1-201ENST00000555205 166 ntBASIC2.96□□□□□ -1.94
HPS3Q969F9 GTF3AP2-201ENST00000557014 266 ntBASIC2.96□□□□□ -1.94
HPS3Q969F9 AC090616.3-201ENST00000582184 217 ntBASIC2.96□□□□□ -1.94
HPS3Q969F9 MIR4635-201ENST00000583759 79 ntBASIC2.96□□□□□ -1.94
HPS3Q969F9 VN1R91P-201ENST00000594377 169 ntBASIC2.96□□□□□ -1.94
HPS3Q969F9 RPL17P51-201ENST00000605218 238 ntBASIC2.96□□□□□ -1.94
HPS3Q969F9 U2.1-201ENST00000618978 145 ntBASIC2.96□□□□□ -1.94
HPS3Q969F9 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.95□□□□□ -1.94
HPS3Q969F9 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
HPS3Q969F9 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HPS3Q969F9 BX322639.1-202ENST00000423987 2213 ntBASIC2.95□□□□□ -1.94
HPS3Q969F9 Y_RNA.132-201ENST00000363421 102 ntBASIC2.95□□□□□ -1.94
HPS3Q969F9 RNA5SP210-201ENST00000391034 120 ntBASIC2.95□□□□□ -1.94
HPS3Q969F9 RNU6-159P-201ENST00000391080 106 ntBASIC2.95□□□□□ -1.94
HPS3Q969F9 RNU1-139P-201ENST00000391307 165 ntBASIC2.95□□□□□ -1.94
HPS3Q969F9 MIR1294-201ENST00000408503 142 ntBASIC2.95□□□□□ -1.94
HPS3Q969F9 RNA5SP21-201ENST00000410917 96 ntBASIC2.95□□□□□ -1.94
HPS3Q969F9 MTCO3P19-201ENST00000415864 321 ntBASIC2.95□□□□□ -1.94
HPS3Q969F9 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.95□□□□□ -1.94
HPS3Q969F9 AC132942.1-201ENST00000486753 483 ntBASIC2.95□□□□□ -1.94
HPS3Q969F9 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.95□□□□□ -1.94
HPS3Q969F9 RNU6-475P-201ENST00000516073 104 ntBASIC2.95□□□□□ -1.94
HPS3Q969F9 RPPH1-2P-201ENST00000516688 293 ntBASIC2.95□□□□□ -1.94
HPS3Q969F9 AC090517.1-201ENST00000569307 266 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms