Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 SNORD11B-201ENST00000607707 90 ntBASIC3.36□□□□□ -1.87
NUP43Q8NFH3 AL078604.3-201ENST00000615580 211 ntBASIC3.36□□□□□ -1.87
NUP43Q8NFH3 AC005562.2-201ENST00000618264 111 ntBASIC3.36□□□□□ -1.87
NUP43Q8NFH3 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.36□□□□□ -1.87
NUP43Q8NFH3 AC007256.1-201ENST00000392253 2765 ntBASIC3.36□□□□□ -1.87
NUP43Q8NFH3 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
NUP43Q8NFH3 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.36□□□□□ -1.87
NUP43Q8NFH3 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.36□□□□□ -1.87
NUP43Q8NFH3 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NUP43Q8NFH3 RNU1-75P-201ENST00000347264 129 ntBASIC3.35□□□□□ -1.87
NUP43Q8NFH3 Y_RNA.182-201ENST00000363880 111 ntBASIC3.35□□□□□ -1.87
NUP43Q8NFH3 RNU6-324P-201ENST00000363957 106 ntBASIC3.35□□□□□ -1.87
NUP43Q8NFH3 SNORD115-30-201ENST00000364117 82 ntBASIC3.35□□□□□ -1.87
NUP43Q8NFH3 SNORD87-201ENST00000364849 89 ntBASIC3.35□□□□□ -1.87
NUP43Q8NFH3 Y_RNA.400-201ENST00000383963 111 ntBASIC3.35□□□□□ -1.87
NUP43Q8NFH3 Y_RNA.568-201ENST00000384742 113 ntBASIC3.35□□□□□ -1.87
NUP43Q8NFH3 AC002075.2-201ENST00000425207 252 ntBASIC3.35□□□□□ -1.87
NUP43Q8NFH3 AC017083.1-201ENST00000428093 483 ntBASIC3.35□□□□□ -1.87
NUP43Q8NFH3 AL445584.1-201ENST00000431451 330 ntBASIC3.35□□□□□ -1.87
NUP43Q8NFH3 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.35□□□□□ -1.87
NUP43Q8NFH3 AC005840.1-201ENST00000498412 377 ntBASIC3.35□□□□□ -1.87
NUP43Q8NFH3 RNU6-107P-201ENST00000516643 102 ntBASIC3.35□□□□□ -1.87
NUP43Q8NFH3 EIF4A1P12-201ENST00000551910 141 ntBASIC3.35□□□□□ -1.87
NUP43Q8NFH3 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.35□□□□□ -1.87
NUP43Q8NFH3 AC012493.2-201ENST00000595083 291 ntBASIC3.35□□□□□ -1.87
NUP43Q8NFH3 TCL6_2.1-201ENST00000615162 119 ntBASIC3.35□□□□□ -1.87
NUP43Q8NFH3 AC002076.2-201ENST00000617362 122 ntBASIC3.35□□□□□ -1.87
NUP43Q8NFH3 AC012442.3-202ENST00000636742 206 ntBASIC3.35□□□□□ -1.87
NUP43Q8NFH3 U6.98-201ENST00000637157 84 ntBASIC3.35□□□□□ -1.87
NUP43Q8NFH3 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.35□□□□□ -1.87
NUP43Q8NFH3 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.35□□□□□ -1.87
NUP43Q8NFH3 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
NUP43Q8NFH3 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.34□□□□□ -1.87
NUP43Q8NFH3 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
NUP43Q8NFH3 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
NUP43Q8NFH3 AC010889.1-201ENST00000566193 2666 ntBASIC3.34□□□□□ -1.87
NUP43Q8NFH3 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
NUP43Q8NFH3 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.34□□□□□ -1.87
NUP43Q8NFH3 RNU6-198P-201ENST00000384258 104 ntBASIC3.34□□□□□ -1.87
NUP43Q8NFH3 Y_RNA.497-201ENST00000384447 98 ntBASIC3.34□□□□□ -1.87
NUP43Q8NFH3 SNORA26.5-201ENST00000391215 123 ntBASIC3.34□□□□□ -1.87
NUP43Q8NFH3 RNU6-381P-201ENST00000391259 108 ntBASIC3.34□□□□□ -1.87
NUP43Q8NFH3 AP000567.1-201ENST00000406413 156 ntBASIC3.34□□□□□ -1.87
NUP43Q8NFH3 AC027124.2-201ENST00000428249 105 ntBASIC3.34□□□□□ -1.87
NUP43Q8NFH3 GOT2P5-201ENST00000433995 546 ntBASIC3.34□□□□□ -1.87
NUP43Q8NFH3 AL162725.1-201ENST00000435405 301 ntBASIC3.34□□□□□ -1.87
NUP43Q8NFH3 AC004386.2-201ENST00000441858 148 ntBASIC3.34□□□□□ -1.87
NUP43Q8NFH3 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC3.34□□□□□ -1.87
NUP43Q8NFH3 RNU7-23P-201ENST00000459465 62 ntBASIC3.34□□□□□ -1.87
NUP43Q8NFH3 AC146507.2-201ENST00000460608 476 ntBASIC3.34□□□□□ -1.87
NUP43Q8NFH3 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.34□□□□□ -1.87
NUP43Q8NFH3 AC068205.3-201ENST00000636385 468 ntBASIC3.34□□□□□ -1.87
NUP43Q8NFH3 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
NUP43Q8NFH3 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
NUP43Q8NFH3 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
NUP43Q8NFH3 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.34□□□□□ -1.88
NUP43Q8NFH3 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NUP43Q8NFH3 AC010680.1-201ENST00000590024 3590 ntBASIC3.33□□□□□ -1.88
NUP43Q8NFH3 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NUP43Q8NFH3 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
NUP43Q8NFH3 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NUP43Q8NFH3 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NUP43Q8NFH3 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NUP43Q8NFH3 RNA5SP119-201ENST00000362715 117 ntBASIC3.33□□□□□ -1.88
NUP43Q8NFH3 SNORD114-19-201ENST00000363072 75 ntBASIC3.33□□□□□ -1.88
NUP43Q8NFH3 RNA5SP51-201ENST00000364750 119 ntBASIC3.33□□□□□ -1.88
NUP43Q8NFH3 RNU6-818P-201ENST00000364837 108 ntBASIC3.33□□□□□ -1.88
NUP43Q8NFH3 RNU6-275P-201ENST00000364910 107 ntBASIC3.33□□□□□ -1.88
NUP43Q8NFH3 Y_RNA.343-201ENST00000365354 112 ntBASIC3.33□□□□□ -1.88
NUP43Q8NFH3 RNU6-22P-201ENST00000384355 107 ntBASIC3.33□□□□□ -1.88
NUP43Q8NFH3 Y_RNA.488-201ENST00000384403 102 ntBASIC3.33□□□□□ -1.88
NUP43Q8NFH3 RNU6-959P-201ENST00000384671 107 ntBASIC3.33□□□□□ -1.88
NUP43Q8NFH3 AL031003.1-201ENST00000404229 172 ntBASIC3.33□□□□□ -1.88
NUP43Q8NFH3 RNU2-51P-201ENST00000410708 197 ntBASIC3.33□□□□□ -1.88
NUP43Q8NFH3 AL035423.1-201ENST00000420331 213 ntBASIC3.33□□□□□ -1.88
NUP43Q8NFH3 SNORD116-25-201ENST00000516517 92 ntBASIC3.33□□□□□ -1.88
NUP43Q8NFH3 AC136628.3-201ENST00000521868 290 ntBASIC3.33□□□□□ -1.88
NUP43Q8NFH3 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.33□□□□□ -1.88
NUP43Q8NFH3 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.33□□□□□ -1.88
NUP43Q8NFH3 AC019176.2-201ENST00000611579 315 ntBASIC3.33□□□□□ -1.88
NUP43Q8NFH3 AC091953.5-201ENST00000622919 233 ntBASIC3.33□□□□□ -1.88
NUP43Q8NFH3 AP003355.3-201ENST00000623465 114 ntBASIC3.33□□□□□ -1.88
NUP43Q8NFH3 AC068647.1-201ENST00000489539 2265 ntBASIC3.33□□□□□ -1.88
NUP43Q8NFH3 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.33□□□□□ -1.88
NUP43Q8NFH3 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.33□□□□□ -1.88
NUP43Q8NFH3 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
NUP43Q8NFH3 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.32□□□□□ -1.88
NUP43Q8NFH3 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NUP43Q8NFH3 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NUP43Q8NFH3 U3.9-201ENST00000363823 204 ntBASIC3.32□□□□□ -1.88
NUP43Q8NFH3 Y_RNA.215-201ENST00000364204 112 ntBASIC3.32□□□□□ -1.88
NUP43Q8NFH3 SNORA9-201ENST00000384215 133 ntBASIC3.32□□□□□ -1.88
NUP43Q8NFH3 RNU6-750P-201ENST00000390946 107 ntBASIC3.32□□□□□ -1.88
NUP43Q8NFH3 AL159169.1-201ENST00000421119 127 ntBASIC3.32□□□□□ -1.88
NUP43Q8NFH3 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.32□□□□□ -1.88
NUP43Q8NFH3 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.32□□□□□ -1.88
NUP43Q8NFH3 AC145146.1-201ENST00000496370 254 ntBASIC3.32□□□□□ -1.88
NUP43Q8NFH3 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.32□□□□□ -1.88
NUP43Q8NFH3 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.32□□□□□ -1.88
NUP43Q8NFH3 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 159.7 ms