Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.79□□□□□ -2.12
CCDC197Q8NCU1 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.79□□□□□ -2.12
CCDC197Q8NCU1 RNU7-14P-201ENST00000459331 62 ntBASIC1.79□□□□□ -2.12
CCDC197Q8NCU1 HMGB3P17-201ENST00000504195 649 ntBASIC1.79□□□□□ -2.12
CCDC197Q8NCU1 RNA5SP454-201ENST00000517231 127 ntBASIC1.79□□□□□ -2.12
CCDC197Q8NCU1 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.79□□□□□ -2.12
CCDC197Q8NCU1 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.79□□□□□ -2.12
CCDC197Q8NCU1 AC026464.5-201ENST00000562497 722 ntBASIC1.79□□□□□ -2.12
CCDC197Q8NCU1 MIR3169-201ENST00000578032 83 ntBASIC1.79□□□□□ -2.12
CCDC197Q8NCU1 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.79□□□□□ -2.12
CCDC197Q8NCU1 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.79□□□□□ -2.12
CCDC197Q8NCU1 AC093913.1-201ENST00000614178 329 ntBASIC1.79□□□□□ -2.12
CCDC197Q8NCU1 U6atac.1-201ENST00000616025 117 ntBASIC1.79□□□□□ -2.12
CCDC197Q8NCU1 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.79□□□□□ -2.12
CCDC197Q8NCU1 MIR6873-201ENST00000622788 63 ntBASIC1.79□□□□□ -2.12
CCDC197Q8NCU1 SCARNA4-201ENST00000629045 128 ntBASIC1.79□□□□□ -2.12
CCDC197Q8NCU1 LINC02555-201ENST00000563933 1951 ntBASIC1.78□□□□□ -2.12
CCDC197Q8NCU1 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
CCDC197Q8NCU1 RNA5SP289-201ENST00000362332 137 ntBASIC1.78□□□□□ -2.12
CCDC197Q8NCU1 SNORD31B-201ENST00000364977 69 ntBASIC1.78□□□□□ -2.12
CCDC197Q8NCU1 SNORA18.2-201ENST00000383865 132 ntBASIC1.78□□□□□ -2.12
CCDC197Q8NCU1 U8.10-201ENST00000384260 133 ntBASIC1.78□□□□□ -2.12
CCDC197Q8NCU1 RNU6-306P-201ENST00000384617 107 ntBASIC1.78□□□□□ -2.12
CCDC197Q8NCU1 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
CCDC197Q8NCU1 RNU11-3P-201ENST00000391111 133 ntBASIC1.78□□□□□ -2.12
CCDC197Q8NCU1 EIF4EP2-201ENST00000422816 654 ntBASIC1.78□□□□□ -2.12
CCDC197Q8NCU1 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.78□□□□□ -2.12
CCDC197Q8NCU1 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.78□□□□□ -2.12
CCDC197Q8NCU1 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.78□□□□□ -2.12
CCDC197Q8NCU1 AC016925.1-201ENST00000458303 298 ntBASIC1.78□□□□□ -2.12
CCDC197Q8NCU1 RNU6-329P-201ENST00000459618 107 ntBASIC1.78□□□□□ -2.12
CCDC197Q8NCU1 AC007215.1-201ENST00000464893 276 ntBASIC1.78□□□□□ -2.12
CCDC197Q8NCU1 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.78□□□□□ -2.12
CCDC197Q8NCU1 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CCDC197Q8NCU1 ACA59.1-201ENST00000515966 143 ntBASIC1.78□□□□□ -2.12
CCDC197Q8NCU1 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.78□□□□□ -2.12
CCDC197Q8NCU1 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.78□□□□□ -2.12
CCDC197Q8NCU1 MIR4299-201ENST00000577899 72 ntBASIC1.78□□□□□ -2.12
CCDC197Q8NCU1 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.78□□□□□ -2.12
CCDC197Q8NCU1 AC005034.5-201ENST00000604219 466 ntBASIC1.78□□□□□ -2.12
CCDC197Q8NCU1 BNIP3P10-201ENST00000605360 577 ntBASIC1.78□□□□□ -2.12
CCDC197Q8NCU1 AC019193.3-201ENST00000609144 554 ntBASIC1.78□□□□□ -2.12
CCDC197Q8NCU1 AC005562.2-201ENST00000618264 111 ntBASIC1.78□□□□□ -2.12
CCDC197Q8NCU1 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CCDC197Q8NCU1 RNA5SP493-201ENST00000364115 91 ntBASIC1.77□□□□□ -2.13
CCDC197Q8NCU1 MIR128-1-201ENST00000384921 82 ntBASIC1.77□□□□□ -2.13
CCDC197Q8NCU1 AL023284.1-201ENST00000403956 276 ntBASIC1.77□□□□□ -2.13
CCDC197Q8NCU1 AL356776.1-201ENST00000406574 447 ntBASIC1.77□□□□□ -2.13
CCDC197Q8NCU1 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.77□□□□□ -2.13
CCDC197Q8NCU1 RPL31P63-201ENST00000422565 375 ntBASIC1.77□□□□□ -2.13
CCDC197Q8NCU1 MTCO3P46-201ENST00000425787 232 ntBASIC1.77□□□□□ -2.13
CCDC197Q8NCU1 SNRPEP8-201ENST00000442866 260 ntBASIC1.77□□□□□ -2.13
CCDC197Q8NCU1 AL035666.1-201ENST00000446195 348 ntBASIC1.77□□□□□ -2.13
CCDC197Q8NCU1 RPS23P5-201ENST00000495419 428 ntBASIC1.77□□□□□ -2.13
CCDC197Q8NCU1 RNA5SP356-201ENST00000515972 94 ntBASIC1.77□□□□□ -2.13
CCDC197Q8NCU1 AP005660.1-201ENST00000522972 293 ntBASIC1.77□□□□□ -2.13
CCDC197Q8NCU1 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.77□□□□□ -2.13
CCDC197Q8NCU1 AC026470.2-201ENST00000561492 181 ntBASIC1.77□□□□□ -2.13
CCDC197Q8NCU1 DEFB122-202ENST00000569013 197 ntBASIC1.77□□□□□ -2.13
CCDC197Q8NCU1 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.77□□□□□ -2.13
CCDC197Q8NCU1 MIR4742-201ENST00000581069 85 ntBASIC1.77□□□□□ -2.13
CCDC197Q8NCU1 AL022345.1-201ENST00000607292 135 ntBASIC1.77□□□□□ -2.13
CCDC197Q8NCU1 AL590240.4-201ENST00000616908 390 ntBASIC1.77□□□□□ -2.13
CCDC197Q8NCU1 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.77□□□□□ -2.13
CCDC197Q8NCU1 AL133216.2-202ENST00000634512 349 ntBASIC1.77□□□□□ -2.13
CCDC197Q8NCU1 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.77□□□□□ -2.13
CCDC197Q8NCU1 RNU6-23P-201ENST00000363283 107 ntBASIC1.76□□□□□ -2.13
CCDC197Q8NCU1 RNU6-438P-201ENST00000365561 103 ntBASIC1.76□□□□□ -2.13
CCDC197Q8NCU1 MIR487A-201ENST00000385009 80 ntBASIC1.76□□□□□ -2.13
CCDC197Q8NCU1 AL158823.1-201ENST00000418441 478 ntBASIC1.76□□□□□ -2.13
CCDC197Q8NCU1 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.76□□□□□ -2.13
CCDC197Q8NCU1 RNU1-131P-201ENST00000458943 161 ntBASIC1.76□□□□□ -2.13
CCDC197Q8NCU1 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.76□□□□□ -2.13
CCDC197Q8NCU1 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.76□□□□□ -2.13
CCDC197Q8NCU1 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.76□□□□□ -2.13
CCDC197Q8NCU1 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.76□□□□□ -2.13
CCDC197Q8NCU1 AC005000.2-201ENST00000605468 310 ntBASIC1.76□□□□□ -2.13
CCDC197Q8NCU1 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.76□□□□□ -2.13
CCDC197Q8NCU1 AC005296.1-201ENST00000616145 209 ntBASIC1.76□□□□□ -2.13
CCDC197Q8NCU1 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.76□□□□□ -2.13
CCDC197Q8NCU1 AC137590.2-201ENST00000619709 240 ntBASIC1.76□□□□□ -2.13
CCDC197Q8NCU1 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.76□□□□□ -2.13
CCDC197Q8NCU1 MTND5P9-201ENST00000503854 1755 ntBASIC1.75□□□□□ -2.13
CCDC197Q8NCU1 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
CCDC197Q8NCU1 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
CCDC197Q8NCU1 Y_RNA.248-201ENST00000364501 109 ntBASIC1.75□□□□□ -2.13
CCDC197Q8NCU1 Y_RNA.333-201ENST00000365274 102 ntBASIC1.75□□□□□ -2.13
CCDC197Q8NCU1 RNU6-596P-201ENST00000365395 98 ntBASIC1.75□□□□□ -2.13
CCDC197Q8NCU1 SNORA8-201ENST00000384574 139 ntBASIC1.75□□□□□ -2.13
CCDC197Q8NCU1 MIR549A-201ENST00000385268 96 ntBASIC1.75□□□□□ -2.13
CCDC197Q8NCU1 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
CCDC197Q8NCU1 RNU6-510P-201ENST00000391239 108 ntBASIC1.75□□□□□ -2.13
CCDC197Q8NCU1 RNU6-174P-201ENST00000410406 106 ntBASIC1.75□□□□□ -2.13
CCDC197Q8NCU1 RNA5SP501-201ENST00000410990 112 ntBASIC1.75□□□□□ -2.13
CCDC197Q8NCU1 AC004866.1-201ENST00000411748 78 ntBASIC1.75□□□□□ -2.13
CCDC197Q8NCU1 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.75□□□□□ -2.13
CCDC197Q8NCU1 AC139712.2-201ENST00000424302 339 ntBASIC1.75□□□□□ -2.13
CCDC197Q8NCU1 Z82188.1-201ENST00000436709 154 ntBASIC1.75□□□□□ -2.13
CCDC197Q8NCU1 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.75□□□□□ -2.13
CCDC197Q8NCU1 MTATP6P13-201ENST00000438531 667 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 191.6 ms