Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 RNA5SP454-201ENST00000517231 127 ntBASIC1.59□□□□□ -2.15
CCDC71LQ8N9Z2 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.59□□□□□ -2.15
CCDC71LQ8N9Z2 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.59□□□□□ -2.15
CCDC71LQ8N9Z2 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
CCDC71LQ8N9Z2 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.59□□□□□ -2.15
CCDC71LQ8N9Z2 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.59□□□□□ -2.15
CCDC71LQ8N9Z2 CYP4A27P-201ENST00000567218 190 ntBASIC1.59□□□□□ -2.15
CCDC71LQ8N9Z2 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.59□□□□□ -2.15
CCDC71LQ8N9Z2 MIR4790-201ENST00000577799 79 ntBASIC1.59□□□□□ -2.15
CCDC71LQ8N9Z2 MIR5089-201ENST00000580047 84 ntBASIC1.59□□□□□ -2.15
CCDC71LQ8N9Z2 AC124303.1-201ENST00000605703 360 ntBASIC1.59□□□□□ -2.15
CCDC71LQ8N9Z2 Y_RNA.783-201ENST00000613546 102 ntBASIC1.59□□□□□ -2.15
CCDC71LQ8N9Z2 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.59□□□□□ -2.15
CCDC71LQ8N9Z2 MTND5P6-201ENST00000422338 1798 ntBASIC1.59□□□□□ -2.16
CCDC71LQ8N9Z2 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
CCDC71LQ8N9Z2 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
CCDC71LQ8N9Z2 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.59□□□□□ -2.16
CCDC71LQ8N9Z2 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
CCDC71LQ8N9Z2 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.58□□□□□ -2.16
CCDC71LQ8N9Z2 Y_RNA.72-201ENST00000362894 103 ntBASIC1.58□□□□□ -2.16
CCDC71LQ8N9Z2 SNORD32B-201ENST00000364460 84 ntBASIC1.58□□□□□ -2.16
CCDC71LQ8N9Z2 RNU4-42P-201ENST00000364738 142 ntBASIC1.58□□□□□ -2.16
CCDC71LQ8N9Z2 MT-TL1-201ENST00000386347 75 ntBASIC1.58□□□□□ -2.16
CCDC71LQ8N9Z2 SNORA40.19-201ENST00000390846 128 ntBASIC1.58□□□□□ -2.16
CCDC71LQ8N9Z2 RNU6-1093P-201ENST00000391194 107 ntBASIC1.58□□□□□ -2.16
CCDC71LQ8N9Z2 MTCYBP2-201ENST00000407745 171 ntBASIC1.58□□□□□ -2.16
CCDC71LQ8N9Z2 MIR1283-2-201ENST00000408621 87 ntBASIC1.58□□□□□ -2.16
CCDC71LQ8N9Z2 RNA5SP494-201ENST00000410653 129 ntBASIC1.58□□□□□ -2.16
CCDC71LQ8N9Z2 RNU4-53P-201ENST00000410828 140 ntBASIC1.58□□□□□ -2.16
CCDC71LQ8N9Z2 MTND3P8-201ENST00000412909 339 ntBASIC1.58□□□□□ -2.16
CCDC71LQ8N9Z2 AL353705.4-201ENST00000449661 238 ntBASIC1.58□□□□□ -2.16
CCDC71LQ8N9Z2 RPL31P58-201ENST00000469001 379 ntBASIC1.58□□□□□ -2.16
CCDC71LQ8N9Z2 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.58□□□□□ -2.16
CCDC71LQ8N9Z2 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.58□□□□□ -2.16
CCDC71LQ8N9Z2 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.58□□□□□ -2.16
CCDC71LQ8N9Z2 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.58□□□□□ -2.16
CCDC71LQ8N9Z2 PCGEM1.1-201ENST00000613431 131 ntBASIC1.58□□□□□ -2.16
CCDC71LQ8N9Z2 MIR6128-201ENST00000615528 109 ntBASIC1.58□□□□□ -2.16
CCDC71LQ8N9Z2 AC009487.4-201ENST00000624969 3585 ntBASIC1.58□□□□□ -2.16
CCDC71LQ8N9Z2 AC233981.2-201ENST00000611524 1614 ntBASIC1.58□□□□□ -2.16
CCDC71LQ8N9Z2 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.58□□□□□ -2.16
CCDC71LQ8N9Z2 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.58□□□□□ -2.16
CCDC71LQ8N9Z2 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.57□□□□□ -2.16
CCDC71LQ8N9Z2 MIR449A-201ENST00000362113 91 ntBASIC1.57□□□□□ -2.16
CCDC71LQ8N9Z2 U3.9-201ENST00000363823 204 ntBASIC1.57□□□□□ -2.16
CCDC71LQ8N9Z2 SNORA16.1-201ENST00000364597 132 ntBASIC1.57□□□□□ -2.16
CCDC71LQ8N9Z2 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
CCDC71LQ8N9Z2 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
CCDC71LQ8N9Z2 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CCDC71LQ8N9Z2 RNA5SP201-201ENST00000410316 124 ntBASIC1.57□□□□□ -2.16
CCDC71LQ8N9Z2 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.57□□□□□ -2.16
CCDC71LQ8N9Z2 AL139396.1-201ENST00000421137 167 ntBASIC1.57□□□□□ -2.16
CCDC71LQ8N9Z2 AL356320.1-201ENST00000429616 163 ntBASIC1.57□□□□□ -2.16
CCDC71LQ8N9Z2 HSPE1P21-201ENST00000438283 308 ntBASIC1.57□□□□□ -2.16
CCDC71LQ8N9Z2 FTH1P25-201ENST00000447665 469 ntBASIC1.57□□□□□ -2.16
CCDC71LQ8N9Z2 HMGN2P18-201ENST00000450680 270 ntBASIC1.57□□□□□ -2.16
CCDC71LQ8N9Z2 ACA59.1-201ENST00000515966 143 ntBASIC1.57□□□□□ -2.16
CCDC71LQ8N9Z2 RNA5SP490-201ENST00000517141 136 ntBASIC1.57□□□□□ -2.16
CCDC71LQ8N9Z2 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.57□□□□□ -2.16
CCDC71LQ8N9Z2 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.57□□□□□ -2.16
CCDC71LQ8N9Z2 EIF4A1P12-201ENST00000551910 141 ntBASIC1.57□□□□□ -2.16
CCDC71LQ8N9Z2 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.57□□□□□ -2.16
CCDC71LQ8N9Z2 AC090517.1-201ENST00000569307 266 ntBASIC1.57□□□□□ -2.16
CCDC71LQ8N9Z2 FGF7P1-201ENST00000582820 288 ntBASIC1.57□□□□□ -2.16
CCDC71LQ8N9Z2 AP000654.2-201ENST00000605633 586 ntBASIC1.57□□□□□ -2.16
CCDC71LQ8N9Z2 IGHVIII-44-202ENST00000636235 289 ntBASIC1.57□□□□□ -2.16
CCDC71LQ8N9Z2 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CCDC71LQ8N9Z2 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
CCDC71LQ8N9Z2 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CCDC71LQ8N9Z2 RNU6-1286P-201ENST00000383871 107 ntBASIC1.56□□□□□ -2.16
CCDC71LQ8N9Z2 RNU6-26P-201ENST00000383985 107 ntBASIC1.56□□□□□ -2.16
CCDC71LQ8N9Z2 RNU6-784P-201ENST00000384330 106 ntBASIC1.56□□□□□ -2.16
CCDC71LQ8N9Z2 RNU2-41P-201ENST00000410991 178 ntBASIC1.56□□□□□ -2.16
CCDC71LQ8N9Z2 RNA5SP508-201ENST00000411327 119 ntBASIC1.56□□□□□ -2.16
CCDC71LQ8N9Z2 SRIP3-201ENST00000413200 219 ntBASIC1.56□□□□□ -2.16
CCDC71LQ8N9Z2 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.56□□□□□ -2.16
CCDC71LQ8N9Z2 DAP3P1-201ENST00000441522 278 ntBASIC1.56□□□□□ -2.16
CCDC71LQ8N9Z2 RNA5SP57-201ENST00000459463 123 ntBASIC1.56□□□□□ -2.16
CCDC71LQ8N9Z2 FO393415.2-201ENST00000480085 343 ntBASIC1.56□□□□□ -2.16
CCDC71LQ8N9Z2 RNU1-54P-201ENST00000517181 120 ntBASIC1.56□□□□□ -2.16
CCDC71LQ8N9Z2 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.56□□□□□ -2.16
CCDC71LQ8N9Z2 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.56□□□□□ -2.16
CCDC71LQ8N9Z2 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.56□□□□□ -2.16
CCDC71LQ8N9Z2 MIR3618-201ENST00000580330 88 ntBASIC1.56□□□□□ -2.16
CCDC71LQ8N9Z2 AL022345.1-201ENST00000607292 135 ntBASIC1.56□□□□□ -2.16
CCDC71LQ8N9Z2 MIR219B-201ENST00000637023 88 ntBASIC1.56□□□□□ -2.16
CCDC71LQ8N9Z2 RNU4-82P-201ENST00000362443 140 ntBASIC1.55□□□□□ -2.16
CCDC71LQ8N9Z2 SNORD50.1-201ENST00000362987 71 ntBASIC1.55□□□□□ -2.16
CCDC71LQ8N9Z2 RNU5B-2P-201ENST00000363036 113 ntBASIC1.55□□□□□ -2.16
CCDC71LQ8N9Z2 RNU6-1059P-201ENST00000363752 98 ntBASIC1.55□□□□□ -2.16
CCDC71LQ8N9Z2 SNORD114-6-201ENST00000364393 72 ntBASIC1.55□□□□□ -2.16
CCDC71LQ8N9Z2 RNU6-767P-201ENST00000384132 107 ntBASIC1.55□□□□□ -2.16
CCDC71LQ8N9Z2 MIR29C-201ENST00000385231 88 ntBASIC1.55□□□□□ -2.16
CCDC71LQ8N9Z2 MIR549A-201ENST00000385268 96 ntBASIC1.55□□□□□ -2.16
CCDC71LQ8N9Z2 MIR548F5-201ENST00000408421 86 ntBASIC1.55□□□□□ -2.16
CCDC71LQ8N9Z2 RNU2-20P-201ENST00000410425 191 ntBASIC1.55□□□□□ -2.16
CCDC71LQ8N9Z2 AL135786.1-201ENST00000415892 214 ntBASIC1.55□□□□□ -2.16
CCDC71LQ8N9Z2 MTCO3P46-201ENST00000425787 232 ntBASIC1.55□□□□□ -2.16
CCDC71LQ8N9Z2 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.55□□□□□ -2.16
CCDC71LQ8N9Z2 RBMX2P4-201ENST00000441256 376 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms