Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC-0.6□□□□□ -2.51
VPS8Q8N3P4 AC025465.4-201ENST00000513422 638 ntBASIC-0.6□□□□□ -2.51
VPS8Q8N3P4 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.6□□□□□ -2.51
VPS8Q8N3P4 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC-0.6□□□□□ -2.51
VPS8Q8N3P4 AC090049.2-201ENST00000550377 109 ntBASIC-0.6□□□□□ -2.51
VPS8Q8N3P4 AC112693.2-201ENST00000556538 232 ntBASIC-0.6□□□□□ -2.51
VPS8Q8N3P4 MIR4742-201ENST00000581069 85 ntBASIC-0.6□□□□□ -2.51
VPS8Q8N3P4 AC006157.1-201ENST00000611750 366 ntBASIC-0.6□□□□□ -2.51
VPS8Q8N3P4 AC107905.1-201ENST00000616204 426 ntBASIC-0.6□□□□□ -2.51
VPS8Q8N3P4 Y_RNA.324-201ENST00000365165 102 ntBASIC-0.61□□□□□ -2.51
VPS8Q8N3P4 SNORA32.2-201ENST00000384049 122 ntBASIC-0.61□□□□□ -2.51
VPS8Q8N3P4 MIR653-201ENST00000385279 96 ntBASIC-0.61□□□□□ -2.51
VPS8Q8N3P4 SNORA12-201ENST00000391162 147 ntBASIC-0.61□□□□□ -2.51
VPS8Q8N3P4 SNORA40.8-201ENST00000411034 126 ntBASIC-0.61□□□□□ -2.51
VPS8Q8N3P4 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC-0.61□□□□□ -2.51
VPS8Q8N3P4 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC-0.61□□□□□ -2.51
VPS8Q8N3P4 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC-0.61□□□□□ -2.51
VPS8Q8N3P4 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC-0.61□□□□□ -2.51
VPS8Q8N3P4 SNORA31.3-201ENST00000516029 96 ntBASIC-0.61□□□□□ -2.51
VPS8Q8N3P4 RNU2-12P-201ENST00000517216 168 ntBASIC-0.61□□□□□ -2.51
VPS8Q8N3P4 MIR3681-201ENST00000580089 72 ntBASIC-0.61□□□□□ -2.51
VPS8Q8N3P4 AC096720.1-201ENST00000604441 183 ntBASIC-0.61□□□□□ -2.51
VPS8Q8N3P4 ZNF736P9Y-201ENST00000439586 1345 ntBASIC-0.61□□□□□ -2.51
VPS8Q8N3P4 MIR409-201ENST00000362237 79 ntBASIC-0.62□□□□□ -2.51
VPS8Q8N3P4 Y_RNA.25-201ENST00000362528 102 ntBASIC-0.62□□□□□ -2.51
VPS8Q8N3P4 RNU6-929P-201ENST00000384429 107 ntBASIC-0.62□□□□□ -2.51
VPS8Q8N3P4 MIR643-201ENST00000385267 97 ntBASIC-0.62□□□□□ -2.51
VPS8Q8N3P4 MTCYBP10-201ENST00000424905 650 ntBASIC-0.62□□□□□ -2.51
VPS8Q8N3P4 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC-0.62□□□□□ -2.51
VPS8Q8N3P4 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.62□□□□□ -2.51
VPS8Q8N3P4 RPS3AP17-201ENST00000472594 777 ntBASIC-0.62□□□□□ -2.51
VPS8Q8N3P4 AC074133.1-201ENST00000515696 183 ntBASIC-0.62□□□□□ -2.51
VPS8Q8N3P4 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-0.62□□□□□ -2.51
VPS8Q8N3P4 MTND1P15-201ENST00000579262 949 ntBASIC-0.62□□□□□ -2.51
VPS8Q8N3P4 Y_RNA.132-201ENST00000363421 102 ntBASIC-0.63□□□□□ -2.51
VPS8Q8N3P4 MIR196A2-201ENST00000385189 110 ntBASIC-0.63□□□□□ -2.51
VPS8Q8N3P4 SNORD41-201ENST00000386967 70 ntBASIC-0.63□□□□□ -2.51
VPS8Q8N3P4 RNA5SP109-201ENST00000391010 116 ntBASIC-0.63□□□□□ -2.51
VPS8Q8N3P4 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC-0.63□□□□□ -2.51
VPS8Q8N3P4 AC010154.1-201ENST00000425857 269 ntBASIC-0.63□□□□□ -2.51
VPS8Q8N3P4 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC-0.63□□□□□ -2.51
VPS8Q8N3P4 ELOCP30-201ENST00000447108 299 ntBASIC-0.63□□□□□ -2.51
VPS8Q8N3P4 SNORD4A-201ENST00000459174 72 ntBASIC-0.63□□□□□ -2.51
VPS8Q8N3P4 AC087685.1-201ENST00000587507 141 ntBASIC-0.63□□□□□ -2.51
VPS8Q8N3P4 AC133794.1-201ENST00000602731 914 ntBASIC-0.63□□□□□ -2.51
VPS8Q8N3P4 RMST_10.1-201ENST00000616309 154 ntBASIC-0.63□□□□□ -2.51
VPS8Q8N3P4 AC015726.2-201ENST00000620112 122 ntBASIC-0.63□□□□□ -2.51
VPS8Q8N3P4 AL603839.4-201ENST00000624658 1005 ntBASIC-0.63□□□□□ -2.51
VPS8Q8N3P4 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.64□□□□□ -2.51
VPS8Q8N3P4 AL139396.1-201ENST00000421137 167 ntBASIC-0.64□□□□□ -2.51
VPS8Q8N3P4 AL356583.2-201ENST00000426536 280 ntBASIC-0.64□□□□□ -2.51
VPS8Q8N3P4 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC-0.64□□□□□ -2.51
VPS8Q8N3P4 AL122001.1-201ENST00000457027 370 ntBASIC-0.64□□□□□ -2.51
VPS8Q8N3P4 SNORA76.2-201ENST00000517095 137 ntBASIC-0.64□□□□□ -2.51
VPS8Q8N3P4 MIR548AX-201ENST00000580117 73 ntBASIC-0.64□□□□□ -2.51
VPS8Q8N3P4 AC112187.2-201ENST00000604345 283 ntBASIC-0.64□□□□□ -2.51
VPS8Q8N3P4 AL357080.1-201ENST00000617394 239 ntBASIC-0.64□□□□□ -2.51
VPS8Q8N3P4 FTX_2.1-201ENST00000618816 94 ntBASIC-0.64□□□□□ -2.51
VPS8Q8N3P4 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC-0.64□□□□□ -2.51
VPS8Q8N3P4 RNY4P16-201ENST00000364768 94 ntBASIC-0.64□□□□□ -2.51
VPS8Q8N3P4 MIR217-201ENST00000384817 110 ntBASIC-0.64□□□□□ -2.51
VPS8Q8N3P4 SNORA12.2-201ENST00000391040 156 ntBASIC-0.64□□□□□ -2.51
VPS8Q8N3P4 AL603865.2-201ENST00000401679 213 ntBASIC-0.64□□□□□ -2.51
VPS8Q8N3P4 RNU6-994P-201ENST00000410507 111 ntBASIC-0.64□□□□□ -2.51
VPS8Q8N3P4 RNU6-1025P-201ENST00000410629 104 ntBASIC-0.64□□□□□ -2.51
VPS8Q8N3P4 BTF3L4P1-201ENST00000413813 468 ntBASIC-0.64□□□□□ -2.51
VPS8Q8N3P4 MTATP6P16-201ENST00000434543 526 ntBASIC-0.64□□□□□ -2.51
VPS8Q8N3P4 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC-0.64□□□□□ -2.51
VPS8Q8N3P4 LINC01399-202ENST00000458450 244 ntBASIC-0.64□□□□□ -2.51
VPS8Q8N3P4 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.64□□□□□ -2.51
VPS8Q8N3P4 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC-0.64□□□□□ -2.51
VPS8Q8N3P4 AF235103.2-201ENST00000525753 346 ntBASIC-0.64□□□□□ -2.51
VPS8Q8N3P4 AP002001.1-203ENST00000534002 267 ntBASIC-0.64□□□□□ -2.51
VPS8Q8N3P4 PCGEM1.1-201ENST00000613431 131 ntBASIC-0.64□□□□□ -2.51
VPS8Q8N3P4 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.65□□□□□ -2.51
VPS8Q8N3P4 AL133217.1-201ENST00000450980 425 ntBASIC-0.65□□□□□ -2.51
VPS8Q8N3P4 snoU109.2-201ENST00000459316 135 ntBASIC-0.65□□□□□ -2.51
VPS8Q8N3P4 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC-0.65□□□□□ -2.51
VPS8Q8N3P4 RNA5SP67-201ENST00000516422 131 ntBASIC-0.65□□□□□ -2.51
VPS8Q8N3P4 HIGD1AP17-201ENST00000554576 276 ntBASIC-0.65□□□□□ -2.51
VPS8Q8N3P4 MIR4300-201ENST00000581016 96 ntBASIC-0.65□□□□□ -2.51
VPS8Q8N3P4 AP001033.2-201ENST00000609701 1003 ntBASIC-0.65□□□□□ -2.51
VPS8Q8N3P4 MIR6079-201ENST00000635807 62 ntBASIC-0.65□□□□□ -2.51
VPS8Q8N3P4 RNU6-679P-201ENST00000391003 106 ntBASIC-0.66□□□□□ -2.52
VPS8Q8N3P4 RNA5SP323-201ENST00000391094 133 ntBASIC-0.66□□□□□ -2.52
VPS8Q8N3P4 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.66□□□□□ -2.52
VPS8Q8N3P4 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC-0.66□□□□□ -2.52
VPS8Q8N3P4 MTCO3P10-201ENST00000455912 772 ntBASIC-0.66□□□□□ -2.52
VPS8Q8N3P4 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.66□□□□□ -2.52
VPS8Q8N3P4 snoU13.21-201ENST00000459368 105 ntBASIC-0.66□□□□□ -2.52
VPS8Q8N3P4 SNORD126-201ENST00000459475 77 ntBASIC-0.66□□□□□ -2.52
VPS8Q8N3P4 HMGN2P26-201ENST00000463169 339 ntBASIC-0.66□□□□□ -2.52
VPS8Q8N3P4 MTND4LP26-201ENST00000518144 282 ntBASIC-0.66□□□□□ -2.52
VPS8Q8N3P4 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC-0.66□□□□□ -2.52
VPS8Q8N3P4 AC009712.1-201ENST00000564938 316 ntBASIC-0.66□□□□□ -2.52
VPS8Q8N3P4 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC-0.66□□□□□ -2.52
VPS8Q8N3P4 AC234772.3-201ENST00000602277 528 ntBASIC-0.66□□□□□ -2.52
VPS8Q8N3P4 AL591926.4-201ENST00000616895 298 ntBASIC-0.66□□□□□ -2.52
VPS8Q8N3P4 RNU6-199P-201ENST00000362954 107 ntBASIC-0.67□□□□□ -2.52
VPS8Q8N3P4 SNORD31B-201ENST00000364977 69 ntBASIC-0.67□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 163.8 ms