Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 SNORA31.1-201ENST00000515993 133 ntBASIC3.28□□□□□ -1.88
TRIM48Q8IWZ4 SNORA31.5-201ENST00000516190 133 ntBASIC3.28□□□□□ -1.88
TRIM48Q8IWZ4 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.28□□□□□ -1.88
TRIM48Q8IWZ4 RNU6-107P-201ENST00000516643 102 ntBASIC3.28□□□□□ -1.88
TRIM48Q8IWZ4 SNORA27.4-201ENST00000516650 95 ntBASIC3.28□□□□□ -1.88
TRIM48Q8IWZ4 AC022559.1-201ENST00000520905 205 ntBASIC3.28□□□□□ -1.88
TRIM48Q8IWZ4 AP002392.1-201ENST00000537692 208 ntBASIC3.28□□□□□ -1.88
TRIM48Q8IWZ4 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.28□□□□□ -1.88
TRIM48Q8IWZ4 MIR5195-201ENST00000583555 115 ntBASIC3.28□□□□□ -1.88
TRIM48Q8IWZ4 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.28□□□□□ -1.88
TRIM48Q8IWZ4 AC012493.2-201ENST00000595083 291 ntBASIC3.28□□□□□ -1.88
TRIM48Q8IWZ4 SNRPGP20-201ENST00000604477 205 ntBASIC3.28□□□□□ -1.88
TRIM48Q8IWZ4 AL590240.4-201ENST00000616908 390 ntBASIC3.28□□□□□ -1.88
TRIM48Q8IWZ4 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.28□□□□□ -1.88
TRIM48Q8IWZ4 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.28□□□□□ -1.88
TRIM48Q8IWZ4 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.28□□□□□ -1.88
TRIM48Q8IWZ4 AL109809.4-201ENST00000603520 2185 ntBASIC3.28□□□□□ -1.88
TRIM48Q8IWZ4 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.27□□□□□ -1.89
TRIM48Q8IWZ4 snoU2_19.1-201ENST00000362361 80 ntBASIC3.27□□□□□ -1.89
TRIM48Q8IWZ4 RNU6-47P-201ENST00000383866 107 ntBASIC3.27□□□□□ -1.89
TRIM48Q8IWZ4 RNU6-493P-201ENST00000391321 108 ntBASIC3.27□□□□□ -1.89
TRIM48Q8IWZ4 PCNPP3-201ENST00000393579 471 ntBASIC3.27□□□□□ -1.89
TRIM48Q8IWZ4 MIR548M-201ENST00000408260 86 ntBASIC3.27□□□□□ -1.89
TRIM48Q8IWZ4 RNA5SP201-201ENST00000410316 124 ntBASIC3.27□□□□□ -1.89
TRIM48Q8IWZ4 RNU6-1077P-201ENST00000410506 102 ntBASIC3.27□□□□□ -1.89
TRIM48Q8IWZ4 COX6CP10-201ENST00000416832 224 ntBASIC3.27□□□□□ -1.89
TRIM48Q8IWZ4 HMGN2P7-201ENST00000456186 273 ntBASIC3.27□□□□□ -1.89
TRIM48Q8IWZ4 BX510359.1-201ENST00000456973 237 ntBASIC3.27□□□□□ -1.89
TRIM48Q8IWZ4 snoU13.14-201ENST00000459372 104 ntBASIC3.27□□□□□ -1.89
TRIM48Q8IWZ4 RN7SL807P-201ENST00000470923 297 ntBASIC3.27□□□□□ -1.89
TRIM48Q8IWZ4 AL121594.1-201ENST00000475906 575 ntBASIC3.27□□□□□ -1.89
TRIM48Q8IWZ4 RPL36AP48-201ENST00000485521 314 ntBASIC3.27□□□□□ -1.89
TRIM48Q8IWZ4 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.27□□□□□ -1.89
TRIM48Q8IWZ4 CYCSP23-201ENST00000519781 313 ntBASIC3.27□□□□□ -1.89
TRIM48Q8IWZ4 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.27□□□□□ -1.89
TRIM48Q8IWZ4 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.27□□□□□ -1.89
TRIM48Q8IWZ4 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.27□□□□□ -1.89
TRIM48Q8IWZ4 AL137100.2-201ENST00000555786 315 ntBASIC3.27□□□□□ -1.89
TRIM48Q8IWZ4 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.27□□□□□ -1.89
TRIM48Q8IWZ4 AC005828.6-201ENST00000606610 232 ntBASIC3.27□□□□□ -1.89
TRIM48Q8IWZ4 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.27□□□□□ -1.89
TRIM48Q8IWZ4 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.27□□□□□ -1.89
TRIM48Q8IWZ4 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TRIM48Q8IWZ4 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TRIM48Q8IWZ4 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
TRIM48Q8IWZ4 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
TRIM48Q8IWZ4 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.26□□□□□ -1.89
TRIM48Q8IWZ4 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TRIM48Q8IWZ4 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.26□□□□□ -1.89
TRIM48Q8IWZ4 MIR30E-201ENST00000362104 92 ntBASIC3.26□□□□□ -1.89
TRIM48Q8IWZ4 RNU1-62P-201ENST00000362599 164 ntBASIC3.26□□□□□ -1.89
TRIM48Q8IWZ4 RNU4-80P-201ENST00000363200 141 ntBASIC3.26□□□□□ -1.89
TRIM48Q8IWZ4 RNU6-774P-201ENST00000363238 107 ntBASIC3.26□□□□□ -1.89
TRIM48Q8IWZ4 Y_RNA.136-201ENST00000363444 102 ntBASIC3.26□□□□□ -1.89
TRIM48Q8IWZ4 SNORA18.2-201ENST00000383865 132 ntBASIC3.26□□□□□ -1.89
TRIM48Q8IWZ4 MIR491-201ENST00000384877 84 ntBASIC3.26□□□□□ -1.89
TRIM48Q8IWZ4 MIR320B2-201ENST00000408479 138 ntBASIC3.26□□□□□ -1.89
TRIM48Q8IWZ4 RNU6-1199P-201ENST00000411249 104 ntBASIC3.26□□□□□ -1.89
TRIM48Q8IWZ4 AC004386.2-201ENST00000441858 148 ntBASIC3.26□□□□□ -1.89
TRIM48Q8IWZ4 AL049830.2-201ENST00000480072 201 ntBASIC3.26□□□□□ -1.89
TRIM48Q8IWZ4 RNY3P16-201ENST00000516338 101 ntBASIC3.26□□□□□ -1.89
TRIM48Q8IWZ4 RNU6-155P-201ENST00000516347 100 ntBASIC3.26□□□□□ -1.89
TRIM48Q8IWZ4 DEFB131C-201ENST00000528817 165 ntBASIC3.26□□□□□ -1.89
TRIM48Q8IWZ4 AC087441.2-201ENST00000529141 262 ntBASIC3.26□□□□□ -1.89
TRIM48Q8IWZ4 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.26□□□□□ -1.89
TRIM48Q8IWZ4 AL356575.1-201ENST00000603008 283 ntBASIC3.26□□□□□ -1.89
TRIM48Q8IWZ4 AL161756.2-201ENST00000604597 246 ntBASIC3.26□□□□□ -1.89
TRIM48Q8IWZ4 AC011921.3-201ENST00000605540 361 ntBASIC3.26□□□□□ -1.89
TRIM48Q8IWZ4 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TRIM48Q8IWZ4 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.26□□□□□ -1.89
TRIM48Q8IWZ4 AC092593.1-201ENST00000515413 1815 ntBASIC3.26□□□□□ -1.89
TRIM48Q8IWZ4 AC017071.1-201ENST00000564407 2204 ntBASIC3.25□□□□□ -1.89
TRIM48Q8IWZ4 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TRIM48Q8IWZ4 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TRIM48Q8IWZ4 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TRIM48Q8IWZ4 RNU6-655P-201ENST00000362858 107 ntBASIC3.25□□□□□ -1.89
TRIM48Q8IWZ4 SNORD87-201ENST00000364849 89 ntBASIC3.25□□□□□ -1.89
TRIM48Q8IWZ4 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.25□□□□□ -1.89
TRIM48Q8IWZ4 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.25□□□□□ -1.89
TRIM48Q8IWZ4 AL365496.1-201ENST00000426885 215 ntBASIC3.25□□□□□ -1.89
TRIM48Q8IWZ4 ARF4P2-201ENST00000430209 526 ntBASIC3.25□□□□□ -1.89
TRIM48Q8IWZ4 Z98742.2-201ENST00000431564 187 ntBASIC3.25□□□□□ -1.89
TRIM48Q8IWZ4 AC104332.1-201ENST00000440471 797 ntBASIC3.25□□□□□ -1.89
TRIM48Q8IWZ4 Y_RNA.638-201ENST00000459374 113 ntBASIC3.25□□□□□ -1.89
TRIM48Q8IWZ4 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.25□□□□□ -1.89
TRIM48Q8IWZ4 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.25□□□□□ -1.89
TRIM48Q8IWZ4 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.25□□□□□ -1.89
TRIM48Q8IWZ4 RN7SKP40-201ENST00000517211 242 ntBASIC3.25□□□□□ -1.89
TRIM48Q8IWZ4 HSPE1P18-201ENST00000517602 280 ntBASIC3.25□□□□□ -1.89
TRIM48Q8IWZ4 EIF4A1P12-201ENST00000551910 141 ntBASIC3.25□□□□□ -1.89
TRIM48Q8IWZ4 AC026470.2-201ENST00000561492 181 ntBASIC3.25□□□□□ -1.89
TRIM48Q8IWZ4 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.25□□□□□ -1.89
TRIM48Q8IWZ4 AC011471.1-201ENST00000585766 187 ntBASIC3.25□□□□□ -1.89
TRIM48Q8IWZ4 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.25□□□□□ -1.89
TRIM48Q8IWZ4 MIR3674-201ENST00000636576 68 ntBASIC3.25□□□□□ -1.89
TRIM48Q8IWZ4 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
TRIM48Q8IWZ4 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TRIM48Q8IWZ4 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TRIM48Q8IWZ4 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.25□□□□□ -1.89
TRIM48Q8IWZ4 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms