Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 AC090517.1-201ENST00000569307 266 ntBASIC3.16□□□□□ -1.9
UBE3BQ7Z3V4 AC023043.3-201ENST00000593113 385 ntBASIC3.16□□□□□ -1.9
UBE3BQ7Z3V4 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.16□□□□□ -1.9
UBE3BQ7Z3V4 AC013412.1-201ENST00000610687 192 ntBASIC3.16□□□□□ -1.9
UBE3BQ7Z3V4 AC137590.2-201ENST00000619709 240 ntBASIC3.16□□□□□ -1.9
UBE3BQ7Z3V4 U4.3-201ENST00000621047 82 ntBASIC3.16□□□□□ -1.9
UBE3BQ7Z3V4 Z75746.1-201ENST00000440243 2080 ntBASIC3.16□□□□□ -1.9
UBE3BQ7Z3V4 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
UBE3BQ7Z3V4 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
UBE3BQ7Z3V4 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.15□□□□□ -1.9
UBE3BQ7Z3V4 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
UBE3BQ7Z3V4 AC010889.1-201ENST00000566193 2666 ntBASIC3.15□□□□□ -1.91
UBE3BQ7Z3V4 AC002543.1-201ENST00000299783 1954 ntBASIC3.15□□□□□ -1.91
UBE3BQ7Z3V4 AC092435.3-201ENST00000565538 3654 ntBASIC3.15□□□□□ -1.91
UBE3BQ7Z3V4 RNA5SP289-201ENST00000362332 137 ntBASIC3.15□□□□□ -1.91
UBE3BQ7Z3V4 RNA5SP139-201ENST00000364340 117 ntBASIC3.15□□□□□ -1.91
UBE3BQ7Z3V4 RNU6-708P-201ENST00000384217 107 ntBASIC3.15□□□□□ -1.91
UBE3BQ7Z3V4 RNU6-611P-201ENST00000384276 104 ntBASIC3.15□□□□□ -1.91
UBE3BQ7Z3V4 RNU6-505P-201ENST00000384427 107 ntBASIC3.15□□□□□ -1.91
UBE3BQ7Z3V4 RNU6-19P-201ENST00000384718 107 ntBASIC3.15□□□□□ -1.91
UBE3BQ7Z3V4 MIR153-2-201ENST00000385225 87 ntBASIC3.15□□□□□ -1.91
UBE3BQ7Z3V4 RNU2-49P-201ENST00000410666 184 ntBASIC3.15□□□□□ -1.91
UBE3BQ7Z3V4 CYCSP48-201ENST00000417124 323 ntBASIC3.15□□□□□ -1.91
UBE3BQ7Z3V4 ELOCP20-201ENST00000422460 345 ntBASIC3.15□□□□□ -1.91
UBE3BQ7Z3V4 RPEP5-201ENST00000441137 268 ntBASIC3.15□□□□□ -1.91
UBE3BQ7Z3V4 DYNLT3P2-201ENST00000442517 295 ntBASIC3.15□□□□□ -1.91
UBE3BQ7Z3V4 RPL39P29-201ENST00000447779 157 ntBASIC3.15□□□□□ -1.91
UBE3BQ7Z3V4 AC012308.1-201ENST00000451232 178 ntBASIC3.15□□□□□ -1.91
UBE3BQ7Z3V4 U8.22-201ENST00000459141 133 ntBASIC3.15□□□□□ -1.91
UBE3BQ7Z3V4 TOMM22P6-201ENST00000465035 409 ntBASIC3.15□□□□□ -1.91
UBE3BQ7Z3V4 Y_RNA.668-201ENST00000516233 93 ntBASIC3.15□□□□□ -1.91
UBE3BQ7Z3V4 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.15□□□□□ -1.91
UBE3BQ7Z3V4 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.15□□□□□ -1.91
UBE3BQ7Z3V4 AL121655.1-201ENST00000605811 308 ntBASIC3.15□□□□□ -1.91
UBE3BQ7Z3V4 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.15□□□□□ -1.91
UBE3BQ7Z3V4 MIR8062-201ENST00000621515 85 ntBASIC3.15□□□□□ -1.91
UBE3BQ7Z3V4 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.15□□□□□ -1.91
UBE3BQ7Z3V4 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.15□□□□□ -1.91
UBE3BQ7Z3V4 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
UBE3BQ7Z3V4 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
UBE3BQ7Z3V4 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.14□□□□□ -1.91
UBE3BQ7Z3V4 U8.9-201ENST00000365667 134 ntBASIC3.14□□□□□ -1.91
UBE3BQ7Z3V4 U8.10-201ENST00000384260 133 ntBASIC3.14□□□□□ -1.91
UBE3BQ7Z3V4 Y_RNA.504-201ENST00000384481 104 ntBASIC3.14□□□□□ -1.91
UBE3BQ7Z3V4 RNA5SP213-201ENST00000391031 106 ntBASIC3.14□□□□□ -1.91
UBE3BQ7Z3V4 RNU1-139P-201ENST00000391307 165 ntBASIC3.14□□□□□ -1.91
UBE3BQ7Z3V4 Y_RNA.618-201ENST00000410949 107 ntBASIC3.14□□□□□ -1.91
UBE3BQ7Z3V4 AC244670.1-201ENST00000436879 112 ntBASIC3.14□□□□□ -1.91
UBE3BQ7Z3V4 RPL23AP58-201ENST00000440453 469 ntBASIC3.14□□□□□ -1.91
UBE3BQ7Z3V4 GPM6BP3-201ENST00000442797 145 ntBASIC3.14□□□□□ -1.91
UBE3BQ7Z3V4 RN7SL297P-201ENST00000483161 293 ntBASIC3.14□□□□□ -1.91
UBE3BQ7Z3V4 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.14□□□□□ -1.91
UBE3BQ7Z3V4 RNU6-1143P-201ENST00000516125 104 ntBASIC3.14□□□□□ -1.91
UBE3BQ7Z3V4 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.14□□□□□ -1.91
UBE3BQ7Z3V4 AC007375.1-201ENST00000554513 578 ntBASIC3.14□□□□□ -1.91
UBE3BQ7Z3V4 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.14□□□□□ -1.91
UBE3BQ7Z3V4 AC091544.4-201ENST00000555268 342 ntBASIC3.14□□□□□ -1.91
UBE3BQ7Z3V4 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.14□□□□□ -1.91
UBE3BQ7Z3V4 AL391813.1-201ENST00000603098 260 ntBASIC3.14□□□□□ -1.91
UBE3BQ7Z3V4 CTSLP2-204ENST00000629029 392 ntBASIC3.14□□□□□ -1.91
UBE3BQ7Z3V4 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
UBE3BQ7Z3V4 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
UBE3BQ7Z3V4 RNU6-137P-201ENST00000363680 108 ntBASIC3.13□□□□□ -1.91
UBE3BQ7Z3V4 Y_RNA.471-201ENST00000384312 102 ntBASIC3.13□□□□□ -1.91
UBE3BQ7Z3V4 Y_RNA.512-201ENST00000384518 102 ntBASIC3.13□□□□□ -1.91
UBE3BQ7Z3V4 MIR32-201ENST00000384965 70 ntBASIC3.13□□□□□ -1.91
UBE3BQ7Z3V4 SDAD1P3-201ENST00000427380 333 ntBASIC3.13□□□□□ -1.91
UBE3BQ7Z3V4 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.13□□□□□ -1.91
UBE3BQ7Z3V4 AC004383.1-201ENST00000438135 289 ntBASIC3.13□□□□□ -1.91
UBE3BQ7Z3V4 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.13□□□□□ -1.91
UBE3BQ7Z3V4 RNU7-87P-201ENST00000459343 62 ntBASIC3.13□□□□□ -1.91
UBE3BQ7Z3V4 AC107626.1-201ENST00000471084 183 ntBASIC3.13□□□□□ -1.91
UBE3BQ7Z3V4 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.13□□□□□ -1.91
UBE3BQ7Z3V4 AC008413.1-201ENST00000511864 177 ntBASIC3.13□□□□□ -1.91
UBE3BQ7Z3V4 AC067942.3-201ENST00000512025 362 ntBASIC3.13□□□□□ -1.91
UBE3BQ7Z3V4 RN7SKP282-201ENST00000516824 299 ntBASIC3.13□□□□□ -1.91
UBE3BQ7Z3V4 RNU6-897P-201ENST00000517135 105 ntBASIC3.13□□□□□ -1.91
UBE3BQ7Z3V4 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.13□□□□□ -1.91
UBE3BQ7Z3V4 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.13□□□□□ -1.91
UBE3BQ7Z3V4 AC021231.3-201ENST00000558497 370 ntBASIC3.13□□□□□ -1.91
UBE3BQ7Z3V4 AC025281.1-201ENST00000567026 265 ntBASIC3.13□□□□□ -1.91
UBE3BQ7Z3V4 AC010620.2-201ENST00000600135 313 ntBASIC3.13□□□□□ -1.91
UBE3BQ7Z3V4 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.13□□□□□ -1.91
UBE3BQ7Z3V4 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.13□□□□□ -1.91
UBE3BQ7Z3V4 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.13□□□□□ -1.91
UBE3BQ7Z3V4 SNORD115-8-201ENST00000363856 82 ntBASIC3.12□□□□□ -1.91
UBE3BQ7Z3V4 Y_RNA.183-201ENST00000363882 113 ntBASIC3.12□□□□□ -1.91
UBE3BQ7Z3V4 RNU6-770P-201ENST00000363929 105 ntBASIC3.12□□□□□ -1.91
UBE3BQ7Z3V4 SNORD115-38-201ENST00000365037 82 ntBASIC3.12□□□□□ -1.91
UBE3BQ7Z3V4 Y_RNA.458-201ENST00000384240 102 ntBASIC3.12□□□□□ -1.91
UBE3BQ7Z3V4 SNORA26.7-201ENST00000391288 122 ntBASIC3.12□□□□□ -1.91
UBE3BQ7Z3V4 RNU6-130P-201ENST00000411112 103 ntBASIC3.12□□□□□ -1.91
UBE3BQ7Z3V4 RNA5SP508-201ENST00000411327 119 ntBASIC3.12□□□□□ -1.91
UBE3BQ7Z3V4 RPS26P42-201ENST00000413485 326 ntBASIC3.12□□□□□ -1.91
UBE3BQ7Z3V4 EIF1P2-201ENST00000428233 350 ntBASIC3.12□□□□□ -1.91
UBE3BQ7Z3V4 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.12□□□□□ -1.91
UBE3BQ7Z3V4 RPL30P12-201ENST00000474666 353 ntBASIC3.12□□□□□ -1.91
UBE3BQ7Z3V4 AC010469.2-201ENST00000496412 480 ntBASIC3.12□□□□□ -1.91
UBE3BQ7Z3V4 RAC1P5-201ENST00000512182 576 ntBASIC3.12□□□□□ -1.91
UBE3BQ7Z3V4 AC115990.1-201ENST00000526957 301 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms