Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RUFY4Q6ZNE9 RNU1-70P-201ENST00000362618 164 ntBASIC3.65□□□□□ -1.83
RUFY4Q6ZNE9 Y_RNA.40-201ENST00000362645 93 ntBASIC3.65□□□□□ -1.83
RUFY4Q6ZNE9 RNU6-799P-201ENST00000363567 107 ntBASIC3.65□□□□□ -1.83
RUFY4Q6ZNE9 SNORD27-201ENST00000363981 72 ntBASIC3.65□□□□□ -1.83
RUFY4Q6ZNE9 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.65□□□□□ -1.83
RUFY4Q6ZNE9 RNU6-20P-201ENST00000384106 107 ntBASIC3.65□□□□□ -1.83
RUFY4Q6ZNE9 RNU6-21P-201ENST00000384710 107 ntBASIC3.65□□□□□ -1.83
RUFY4Q6ZNE9 COTL1P1-201ENST00000422309 375 ntBASIC3.65□□□□□ -1.83
RUFY4Q6ZNE9 AP001324.2-201ENST00000461163 319 ntBASIC3.65□□□□□ -1.83
RUFY4Q6ZNE9 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.65□□□□□ -1.83
RUFY4Q6ZNE9 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.65□□□□□ -1.83
RUFY4Q6ZNE9 SNORD59.2-201ENST00000516873 68 ntBASIC3.65□□□□□ -1.83
RUFY4Q6ZNE9 MIR2276-201ENST00000516886 89 ntBASIC3.65□□□□□ -1.83
RUFY4Q6ZNE9 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.65□□□□□ -1.83
RUFY4Q6ZNE9 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.65□□□□□ -1.83
RUFY4Q6ZNE9 AC027176.1-201ENST00000560204 514 ntBASIC3.65□□□□□ -1.83
RUFY4Q6ZNE9 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.65□□□□□ -1.83
RUFY4Q6ZNE9 AL137843.1-201ENST00000605078 385 ntBASIC3.65□□□□□ -1.83
RUFY4Q6ZNE9 AC107294.3-201ENST00000609211 526 ntBASIC3.65□□□□□ -1.83
RUFY4Q6ZNE9 U2.14-201ENST00000615943 113 ntBASIC3.65□□□□□ -1.83
RUFY4Q6ZNE9 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.65□□□□□ -1.83
RUFY4Q6ZNE9 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.65□□□□□ -1.83
RUFY4Q6ZNE9 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.65□□□□□ -1.83
RUFY4Q6ZNE9 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
RUFY4Q6ZNE9 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.64□□□□□ -1.83
RUFY4Q6ZNE9 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
RUFY4Q6ZNE9 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
RUFY4Q6ZNE9 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RUFY4Q6ZNE9 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RUFY4Q6ZNE9 Y_RNA.16-201ENST00000362421 102 ntBASIC3.64□□□□□ -1.83
RUFY4Q6ZNE9 RNU6-1266P-201ENST00000362794 105 ntBASIC3.64□□□□□ -1.83
RUFY4Q6ZNE9 RNU6-102P-201ENST00000384485 104 ntBASIC3.64□□□□□ -1.83
RUFY4Q6ZNE9 Y_RNA.539-201ENST00000384635 107 ntBASIC3.64□□□□□ -1.83
RUFY4Q6ZNE9 RNA5SP354-201ENST00000391247 136 ntBASIC3.64□□□□□ -1.83
RUFY4Q6ZNE9 AC126124.2-201ENST00000413542 321 ntBASIC3.64□□□□□ -1.83
RUFY4Q6ZNE9 RPL23AP36-201ENST00000413895 458 ntBASIC3.64□□□□□ -1.83
RUFY4Q6ZNE9 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.64□□□□□ -1.83
RUFY4Q6ZNE9 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.64□□□□□ -1.83
RUFY4Q6ZNE9 RPL23AP67-201ENST00000465341 474 ntBASIC3.64□□□□□ -1.83
RUFY4Q6ZNE9 RPL27AP5-201ENST00000469428 449 ntBASIC3.64□□□□□ -1.83
RUFY4Q6ZNE9 AL121594.1-201ENST00000475906 575 ntBASIC3.64□□□□□ -1.83
RUFY4Q6ZNE9 RPL36AP48-201ENST00000485521 314 ntBASIC3.64□□□□□ -1.83
RUFY4Q6ZNE9 RNA5SP341-201ENST00000516261 117 ntBASIC3.64□□□□□ -1.83
RUFY4Q6ZNE9 RNU7-110P-201ENST00000516891 62 ntBASIC3.64□□□□□ -1.83
RUFY4Q6ZNE9 EIF4A1P12-201ENST00000551910 141 ntBASIC3.64□□□□□ -1.83
RUFY4Q6ZNE9 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.64□□□□□ -1.83
RUFY4Q6ZNE9 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RUFY4Q6ZNE9 AC007256.1-201ENST00000392253 2765 ntBASIC3.63□□□□□ -1.83
RUFY4Q6ZNE9 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.63□□□□□ -1.83
RUFY4Q6ZNE9 AP003122.5-201ENST00000527668 3766 ntBASIC3.63□□□□□ -1.83
RUFY4Q6ZNE9 U3.9-201ENST00000363823 204 ntBASIC3.63□□□□□ -1.83
RUFY4Q6ZNE9 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RUFY4Q6ZNE9 SNORA18.3-201ENST00000384122 132 ntBASIC3.63□□□□□ -1.83
RUFY4Q6ZNE9 Y_RNA.785-201ENST00000384290 109 ntBASIC3.63□□□□□ -1.83
RUFY4Q6ZNE9 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.63□□□□□ -1.83
RUFY4Q6ZNE9 RPL23AP62-201ENST00000463396 453 ntBASIC3.63□□□□□ -1.83
RUFY4Q6ZNE9 CENPBD1P1-201ENST00000464061 469 ntBASIC3.63□□□□□ -1.83
RUFY4Q6ZNE9 HMGB3P17-201ENST00000504195 649 ntBASIC3.63□□□□□ -1.83
RUFY4Q6ZNE9 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.63□□□□□ -1.83
RUFY4Q6ZNE9 RNU2-31P-201ENST00000516954 155 ntBASIC3.63□□□□□ -1.83
RUFY4Q6ZNE9 AC068657.1-201ENST00000520807 306 ntBASIC3.63□□□□□ -1.83
RUFY4Q6ZNE9 AC005176.2-201ENST00000596933 147 ntBASIC3.63□□□□□ -1.83
RUFY4Q6ZNE9 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.63□□□□□ -1.83
RUFY4Q6ZNE9 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.63□□□□□ -1.83
RUFY4Q6ZNE9 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
RUFY4Q6ZNE9 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RUFY4Q6ZNE9 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.62□□□□□ -1.83
RUFY4Q6ZNE9 RNU6-961P-201ENST00000363893 105 ntBASIC3.62□□□□□ -1.83
RUFY4Q6ZNE9 RNU6-338P-201ENST00000383888 105 ntBASIC3.62□□□□□ -1.83
RUFY4Q6ZNE9 RNU6-1310P-201ENST00000384153 107 ntBASIC3.62□□□□□ -1.83
RUFY4Q6ZNE9 RNU4-47P-201ENST00000410876 114 ntBASIC3.62□□□□□ -1.83
RUFY4Q6ZNE9 UQCRBP2-201ENST00000447827 297 ntBASIC3.62□□□□□ -1.83
RUFY4Q6ZNE9 S100A11P2-201ENST00000467589 312 ntBASIC3.62□□□□□ -1.83
RUFY4Q6ZNE9 UBE2DNL-203ENST00000474922 222 ntBASIC3.62□□□□□ -1.83
RUFY4Q6ZNE9 RPL23AP70-201ENST00000483361 460 ntBASIC3.62□□□□□ -1.83
RUFY4Q6ZNE9 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.62□□□□□ -1.83
RUFY4Q6ZNE9 AC107934.2-201ENST00000518653 310 ntBASIC3.62□□□□□ -1.83
RUFY4Q6ZNE9 AC104027.1-201ENST00000521887 300 ntBASIC3.62□□□□□ -1.83
RUFY4Q6ZNE9 RPL17P51-201ENST00000605218 238 ntBASIC3.62□□□□□ -1.83
RUFY4Q6ZNE9 AL359854.1-201ENST00000614203 1594 ntBASIC3.62□□□□□ -1.83
RUFY4Q6ZNE9 MAPK10-322ENST00000641485 4530 ntBASIC3.62□□□□□ -1.83
RUFY4Q6ZNE9 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RUFY4Q6ZNE9 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RUFY4Q6ZNE9 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RUFY4Q6ZNE9 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
RUFY4Q6ZNE9 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RUFY4Q6ZNE9 RNU4-15P-201ENST00000362613 141 ntBASIC3.61□□□□□ -1.83
RUFY4Q6ZNE9 RNU6-1175P-201ENST00000365200 107 ntBASIC3.61□□□□□ -1.83
RUFY4Q6ZNE9 RNU6-378P-201ENST00000384324 107 ntBASIC3.61□□□□□ -1.83
RUFY4Q6ZNE9 Y_RNA.569-201ENST00000384749 103 ntBASIC3.61□□□□□ -1.83
RUFY4Q6ZNE9 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.61□□□□□ -1.83
RUFY4Q6ZNE9 AC091179.1-201ENST00000461606 579 ntBASIC3.61□□□□□ -1.83
RUFY4Q6ZNE9 RN7SL863P-201ENST00000462370 296 ntBASIC3.61□□□□□ -1.83
RUFY4Q6ZNE9 AC112771.1-201ENST00000463581 102 ntBASIC3.61□□□□□ -1.83
RUFY4Q6ZNE9 AC109925.1-201ENST00000478069 331 ntBASIC3.61□□□□□ -1.83
RUFY4Q6ZNE9 RPS27P26-201ENST00000494583 239 ntBASIC3.61□□□□□ -1.83
RUFY4Q6ZNE9 RPL23AP94-201ENST00000512518 302 ntBASIC3.61□□□□□ -1.83
RUFY4Q6ZNE9 SCARNA24.2-201ENST00000516968 130 ntBASIC3.61□□□□□ -1.83
RUFY4Q6ZNE9 AC018448.1-201ENST00000552843 316 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 199.2 ms