Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 RNU6-1016P-201ENST00000516689 94 ntBASIC1.76□□□□□ -2.13
ZNF544Q6NX49 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.76□□□□□ -2.13
ZNF544Q6NX49 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.76□□□□□ -2.13
ZNF544Q6NX49 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.76□□□□□ -2.13
ZNF544Q6NX49 MIR3199-1-201ENST00000582434 88 ntBASIC1.76□□□□□ -2.13
ZNF544Q6NX49 AL109918.3-201ENST00000603072 338 ntBASIC1.76□□□□□ -2.13
ZNF544Q6NX49 AC069294.1-201ENST00000608397 350 ntBASIC1.76□□□□□ -2.13
ZNF544Q6NX49 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.76□□□□□ -2.13
ZNF544Q6NX49 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.76□□□□□ -2.13
ZNF544Q6NX49 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
ZNF544Q6NX49 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
ZNF544Q6NX49 RNU6-655P-201ENST00000362858 107 ntBASIC1.75□□□□□ -2.13
ZNF544Q6NX49 RNU6-867P-201ENST00000364956 107 ntBASIC1.75□□□□□ -2.13
ZNF544Q6NX49 RNU6-933P-201ENST00000384424 107 ntBASIC1.75□□□□□ -2.13
ZNF544Q6NX49 MIR218-1-201ENST00000384999 110 ntBASIC1.75□□□□□ -2.13
ZNF544Q6NX49 BTF3L4P2-201ENST00000392798 346 ntBASIC1.75□□□□□ -2.13
ZNF544Q6NX49 RNU6-174P-201ENST00000410406 106 ntBASIC1.75□□□□□ -2.13
ZNF544Q6NX49 RPL37P10-201ENST00000412884 288 ntBASIC1.75□□□□□ -2.13
ZNF544Q6NX49 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.75□□□□□ -2.13
ZNF544Q6NX49 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.75□□□□□ -2.13
ZNF544Q6NX49 EIF1AXP1-201ENST00000419267 435 ntBASIC1.75□□□□□ -2.13
ZNF544Q6NX49 AC003685.2-201ENST00000422795 395 ntBASIC1.75□□□□□ -2.13
ZNF544Q6NX49 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.75□□□□□ -2.13
ZNF544Q6NX49 AC027124.2-201ENST00000428249 105 ntBASIC1.75□□□□□ -2.13
ZNF544Q6NX49 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.75□□□□□ -2.13
ZNF544Q6NX49 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.75□□□□□ -2.13
ZNF544Q6NX49 AC244670.1-201ENST00000436879 112 ntBASIC1.75□□□□□ -2.13
ZNF544Q6NX49 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.75□□□□□ -2.13
ZNF544Q6NX49 AC079354.2-201ENST00000453523 154 ntBASIC1.75□□□□□ -2.13
ZNF544Q6NX49 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.75□□□□□ -2.13
ZNF544Q6NX49 AC016632.1-201ENST00000503994 196 ntBASIC1.75□□□□□ -2.13
ZNF544Q6NX49 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.75□□□□□ -2.13
ZNF544Q6NX49 AC091874.1-201ENST00000511402 339 ntBASIC1.75□□□□□ -2.13
ZNF544Q6NX49 RNU6-237P-201ENST00000515985 71 ntBASIC1.75□□□□□ -2.13
ZNF544Q6NX49 RNA5SP182-201ENST00000516064 82 ntBASIC1.75□□□□□ -2.13
ZNF544Q6NX49 RNU2-53P-201ENST00000516257 147 ntBASIC1.75□□□□□ -2.13
ZNF544Q6NX49 RNU1-54P-201ENST00000517181 120 ntBASIC1.75□□□□□ -2.13
ZNF544Q6NX49 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.75□□□□□ -2.13
ZNF544Q6NX49 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.75□□□□□ -2.13
ZNF544Q6NX49 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.75□□□□□ -2.13
ZNF544Q6NX49 AC024614.2-201ENST00000577584 372 ntBASIC1.75□□□□□ -2.13
ZNF544Q6NX49 AC018462.2-201ENST00000605375 395 ntBASIC1.75□□□□□ -2.13
ZNF544Q6NX49 AC019193.3-201ENST00000609144 554 ntBASIC1.75□□□□□ -2.13
ZNF544Q6NX49 AC099654.5-201ENST00000636479 350 ntBASIC1.75□□□□□ -2.13
ZNF544Q6NX49 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.75□□□□□ -2.13
ZNF544Q6NX49 Y_RNA.70-201ENST00000362886 110 ntBASIC1.74□□□□□ -2.13
ZNF544Q6NX49 SNORD50.1-201ENST00000362987 71 ntBASIC1.74□□□□□ -2.13
ZNF544Q6NX49 RNU1-148P-201ENST00000384472 162 ntBASIC1.74□□□□□ -2.13
ZNF544Q6NX49 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.74□□□□□ -2.13
ZNF544Q6NX49 EIF4EP2-201ENST00000422816 654 ntBASIC1.74□□□□□ -2.13
ZNF544Q6NX49 MTND3P9-201ENST00000429526 346 ntBASIC1.74□□□□□ -2.13
ZNF544Q6NX49 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.74□□□□□ -2.13
ZNF544Q6NX49 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
ZNF544Q6NX49 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.74□□□□□ -2.13
ZNF544Q6NX49 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.74□□□□□ -2.13
ZNF544Q6NX49 Y_RNA.635-201ENST00000459041 101 ntBASIC1.74□□□□□ -2.13
ZNF544Q6NX49 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.74□□□□□ -2.13
ZNF544Q6NX49 HMGB1P35-201ENST00000503360 598 ntBASIC1.74□□□□□ -2.13
ZNF544Q6NX49 RNU5F-2P-201ENST00000516066 82 ntBASIC1.74□□□□□ -2.13
ZNF544Q6NX49 MIR5696-201ENST00000578474 85 ntBASIC1.74□□□□□ -2.13
ZNF544Q6NX49 FGF7P1-201ENST00000582820 288 ntBASIC1.74□□□□□ -2.13
ZNF544Q6NX49 MIR3136-201ENST00000583498 78 ntBASIC1.74□□□□□ -2.13
ZNF544Q6NX49 AC078899.2-201ENST00000595282 212 ntBASIC1.74□□□□□ -2.13
ZNF544Q6NX49 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.74□□□□□ -2.13
ZNF544Q6NX49 AL117336.2-201ENST00000602435 335 ntBASIC1.74□□□□□ -2.13
ZNF544Q6NX49 AL713866.2-201ENST00000603579 219 ntBASIC1.74□□□□□ -2.13
ZNF544Q6NX49 AC113139.1-201ENST00000605049 239 ntBASIC1.74□□□□□ -2.13
ZNF544Q6NX49 AC009318.2-201ENST00000610917 651 ntBASIC1.74□□□□□ -2.13
ZNF544Q6NX49 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.74□□□□□ -2.13
ZNF544Q6NX49 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
ZNF544Q6NX49 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.73□□□□□ -2.13
ZNF544Q6NX49 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.73□□□□□ -2.13
ZNF544Q6NX49 RNU6-212P-201ENST00000362642 104 ntBASIC1.73□□□□□ -2.13
ZNF544Q6NX49 RNU5B-2P-201ENST00000363036 113 ntBASIC1.73□□□□□ -2.13
ZNF544Q6NX49 RNA5SP125-201ENST00000364843 120 ntBASIC1.73□□□□□ -2.13
ZNF544Q6NX49 RNU5E-4P-201ENST00000364931 120 ntBASIC1.73□□□□□ -2.13
ZNF544Q6NX49 RNU6-1286P-201ENST00000383871 107 ntBASIC1.73□□□□□ -2.13
ZNF544Q6NX49 RNU6-142P-201ENST00000384019 107 ntBASIC1.73□□□□□ -2.13
ZNF544Q6NX49 MT-TD-201ENST00000387419 68 ntBASIC1.73□□□□□ -2.13
ZNF544Q6NX49 RNU4-14P-201ENST00000410858 122 ntBASIC1.73□□□□□ -2.13
ZNF544Q6NX49 RPL31P63-201ENST00000422565 375 ntBASIC1.73□□□□□ -2.13
ZNF544Q6NX49 USP9YP30-201ENST00000430729 455 ntBASIC1.73□□□□□ -2.13
ZNF544Q6NX49 AL591806.2-201ENST00000433122 173 ntBASIC1.73□□□□□ -2.13
ZNF544Q6NX49 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.73□□□□□ -2.13
ZNF544Q6NX49 AC093019.1-201ENST00000443135 252 ntBASIC1.73□□□□□ -2.13
ZNF544Q6NX49 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.73□□□□□ -2.13
ZNF544Q6NX49 AC108210.2-201ENST00000503681 201 ntBASIC1.73□□□□□ -2.13
ZNF544Q6NX49 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
ZNF544Q6NX49 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.73□□□□□ -2.13
ZNF544Q6NX49 ACA59.1-201ENST00000515966 143 ntBASIC1.73□□□□□ -2.13
ZNF544Q6NX49 HSPE1P4-201ENST00000550617 308 ntBASIC1.73□□□□□ -2.13
ZNF544Q6NX49 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.73□□□□□ -2.13
ZNF544Q6NX49 AC011494.1-201ENST00000596454 237 ntBASIC1.73□□□□□ -2.13
ZNF544Q6NX49 AC243960.4-201ENST00000600532 288 ntBASIC1.73□□□□□ -2.13
ZNF544Q6NX49 MIR3976-201ENST00000606807 139 ntBASIC1.73□□□□□ -2.13
ZNF544Q6NX49 MIR6128-201ENST00000615528 109 ntBASIC1.73□□□□□ -2.13
ZNF544Q6NX49 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.73□□□□□ -2.13
ZNF544Q6NX49 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
ZNF544Q6NX49 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.72□□□□□ -2.13
ZNF544Q6NX49 RNU6-842P-201ENST00000384269 107 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms