Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 RNA5SP450-201ENST00000411206 102 ntBASIC2.35□□□□□ -2.03
CCDC30Q5VVM6 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC30Q5VVM6 HMGN2P18-201ENST00000450680 270 ntBASIC2.35□□□□□ -2.03
CCDC30Q5VVM6 PCMTD1P1-201ENST00000455560 355 ntBASIC2.35□□□□□ -2.03
CCDC30Q5VVM6 MTND1P11-201ENST00000456661 876 ntBASIC2.35□□□□□ -2.03
CCDC30Q5VVM6 AC092989.1-201ENST00000481235 277 ntBASIC2.35□□□□□ -2.03
CCDC30Q5VVM6 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.35□□□□□ -2.03
CCDC30Q5VVM6 RNA5SP490-201ENST00000517141 136 ntBASIC2.35□□□□□ -2.03
CCDC30Q5VVM6 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.35□□□□□ -2.03
CCDC30Q5VVM6 DEFB122-202ENST00000569013 197 ntBASIC2.35□□□□□ -2.03
CCDC30Q5VVM6 AC146944.4-201ENST00000602697 718 ntBASIC2.35□□□□□ -2.03
CCDC30Q5VVM6 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.35□□□□□ -2.03
CCDC30Q5VVM6 AC137590.2-201ENST00000619709 240 ntBASIC2.35□□□□□ -2.03
CCDC30Q5VVM6 DUXAP9-208ENST00000622815 614 ntBASIC2.35□□□□□ -2.03
CCDC30Q5VVM6 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
CCDC30Q5VVM6 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC30Q5VVM6 CENPCP1-201ENST00000533085 2578 ntBASIC2.34□□□□□ -2.03
CCDC30Q5VVM6 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
CCDC30Q5VVM6 RNU6-1164P-201ENST00000364428 107 ntBASIC2.34□□□□□ -2.03
CCDC30Q5VVM6 Y_RNA.332-201ENST00000365271 113 ntBASIC2.34□□□□□ -2.03
CCDC30Q5VVM6 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CCDC30Q5VVM6 CYCSP49-201ENST00000420810 319 ntBASIC2.34□□□□□ -2.03
CCDC30Q5VVM6 FTH1P25-201ENST00000447665 469 ntBASIC2.34□□□□□ -2.03
CCDC30Q5VVM6 FGF7P6-202ENST00000451282 293 ntBASIC2.34□□□□□ -2.03
CCDC30Q5VVM6 RPS29P11-201ENST00000496507 171 ntBASIC2.34□□□□□ -2.03
CCDC30Q5VVM6 RPL23AP63-201ENST00000498752 471 ntBASIC2.34□□□□□ -2.03
CCDC30Q5VVM6 MIR449C-201ENST00000516047 92 ntBASIC2.34□□□□□ -2.03
CCDC30Q5VVM6 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC30Q5VVM6 AC087441.2-201ENST00000529141 262 ntBASIC2.34□□□□□ -2.03
CCDC30Q5VVM6 AP003465.2-201ENST00000602571 373 ntBASIC2.34□□□□□ -2.03
CCDC30Q5VVM6 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
CCDC30Q5VVM6 AC007014.2-201ENST00000615581 479 ntBASIC2.34□□□□□ -2.03
CCDC30Q5VVM6 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.34□□□□□ -2.03
CCDC30Q5VVM6 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.34□□□□□ -2.03
CCDC30Q5VVM6 AC100810.6-201ENST00000638068 285 ntBASIC2.34□□□□□ -2.03
CCDC30Q5VVM6 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
CCDC30Q5VVM6 RNU1-58P-201ENST00000362413 163 ntBASIC2.33□□□□□ -2.04
CCDC30Q5VVM6 RNU1-76P-201ENST00000362903 159 ntBASIC2.33□□□□□ -2.04
CCDC30Q5VVM6 RNU6-790P-201ENST00000384479 105 ntBASIC2.33□□□□□ -2.04
CCDC30Q5VVM6 Y_RNA.505-201ENST00000384489 102 ntBASIC2.33□□□□□ -2.04
CCDC30Q5VVM6 MIR17-201ENST00000385012 84 ntBASIC2.33□□□□□ -2.04
CCDC30Q5VVM6 MIR1283-2-201ENST00000408621 87 ntBASIC2.33□□□□□ -2.04
CCDC30Q5VVM6 RNA5SP494-201ENST00000410653 129 ntBASIC2.33□□□□□ -2.04
CCDC30Q5VVM6 AL353572.1-201ENST00000442490 417 ntBASIC2.33□□□□□ -2.04
CCDC30Q5VVM6 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.33□□□□□ -2.04
CCDC30Q5VVM6 RNU6-991P-201ENST00000516168 107 ntBASIC2.33□□□□□ -2.04
CCDC30Q5VVM6 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.33□□□□□ -2.04
CCDC30Q5VVM6 AC015712.3-201ENST00000559380 164 ntBASIC2.33□□□□□ -2.04
CCDC30Q5VVM6 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.33□□□□□ -2.04
CCDC30Q5VVM6 uc_338.20-201ENST00000621563 178 ntBASIC2.33□□□□□ -2.04
CCDC30Q5VVM6 Y_RNA.151-201ENST00000363566 112 ntBASIC2.32□□□□□ -2.04
CCDC30Q5VVM6 RNU6-160P-201ENST00000384591 107 ntBASIC2.32□□□□□ -2.04
CCDC30Q5VVM6 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
CCDC30Q5VVM6 RNU6-1093P-201ENST00000391194 107 ntBASIC2.32□□□□□ -2.04
CCDC30Q5VVM6 AL512604.1-201ENST00000404812 257 ntBASIC2.32□□□□□ -2.04
CCDC30Q5VVM6 RNU2-41P-201ENST00000410991 178 ntBASIC2.32□□□□□ -2.04
CCDC30Q5VVM6 MTND4LP16-201ENST00000440828 295 ntBASIC2.32□□□□□ -2.04
CCDC30Q5VVM6 AC130509.1-201ENST00000464158 433 ntBASIC2.32□□□□□ -2.04
CCDC30Q5VVM6 AP005639.2-201ENST00000527592 928 ntBASIC2.32□□□□□ -2.04
CCDC30Q5VVM6 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC30Q5VVM6 SNORA59B-202ENST00000578183 701 ntBASIC2.32□□□□□ -2.04
CCDC30Q5VVM6 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC30Q5VVM6 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC30Q5VVM6 AP000907.4-201ENST00000604143 237 ntBASIC2.32□□□□□ -2.04
CCDC30Q5VVM6 AC122108.2-201ENST00000611946 526 ntBASIC2.32□□□□□ -2.04
CCDC30Q5VVM6 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.32□□□□□ -2.04
CCDC30Q5VVM6 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CCDC30Q5VVM6 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.32□□□□□ -2.04
CCDC30Q5VVM6 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
CCDC30Q5VVM6 SNORD115-3-201ENST00000363100 82 ntBASIC2.31□□□□□ -2.04
CCDC30Q5VVM6 SNORA16.1-201ENST00000364597 132 ntBASIC2.31□□□□□ -2.04
CCDC30Q5VVM6 RNU6-831P-201ENST00000384548 107 ntBASIC2.31□□□□□ -2.04
CCDC30Q5VVM6 RNU6-1148P-201ENST00000410992 104 ntBASIC2.31□□□□□ -2.04
CCDC30Q5VVM6 AC123900.1-201ENST00000420390 96 ntBASIC2.31□□□□□ -2.04
CCDC30Q5VVM6 AL590632.1-201ENST00000424289 371 ntBASIC2.31□□□□□ -2.04
CCDC30Q5VVM6 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC30Q5VVM6 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC30Q5VVM6 AC082651.2-201ENST00000496833 166 ntBASIC2.31□□□□□ -2.04
CCDC30Q5VVM6 MTCO2P30-201ENST00000503662 364 ntBASIC2.31□□□□□ -2.04
CCDC30Q5VVM6 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC30Q5VVM6 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.31□□□□□ -2.04
CCDC30Q5VVM6 AC026470.2-201ENST00000561492 181 ntBASIC2.31□□□□□ -2.04
CCDC30Q5VVM6 AC090517.1-201ENST00000569307 266 ntBASIC2.31□□□□□ -2.04
CCDC30Q5VVM6 MIR4524B-201ENST00000581569 115 ntBASIC2.31□□□□□ -2.04
CCDC30Q5VVM6 MIR3942-201ENST00000585264 109 ntBASIC2.31□□□□□ -2.04
CCDC30Q5VVM6 POLR3GP2-201ENST00000588366 668 ntBASIC2.31□□□□□ -2.04
CCDC30Q5VVM6 AC018638.8-201ENST00000588755 281 ntBASIC2.31□□□□□ -2.04
CCDC30Q5VVM6 MIR3976-201ENST00000606807 139 ntBASIC2.31□□□□□ -2.04
CCDC30Q5VVM6 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.31□□□□□ -2.04
CCDC30Q5VVM6 AL359697.1-201ENST00000624879 587 ntBASIC2.31□□□□□ -2.04
CCDC30Q5VVM6 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.3□□□□□ -2.04
CCDC30Q5VVM6 AL356379.1-201ENST00000414105 126 ntBASIC2.3□□□□□ -2.04
CCDC30Q5VVM6 EIF4EP2-201ENST00000422816 654 ntBASIC2.3□□□□□ -2.04
CCDC30Q5VVM6 BX510359.4-201ENST00000423750 193 ntBASIC2.3□□□□□ -2.04
CCDC30Q5VVM6 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.3□□□□□ -2.04
CCDC30Q5VVM6 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.3□□□□□ -2.04
CCDC30Q5VVM6 OR2AQ1P-201ENST00000451972 200 ntBASIC2.3□□□□□ -2.04
CCDC30Q5VVM6 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.3□□□□□ -2.04
CCDC30Q5VVM6 HMGN2P23-201ENST00000456759 269 ntBASIC2.3□□□□□ -2.04
CCDC30Q5VVM6 snoU13.6-201ENST00000458785 104 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms