Protein–RNA interactions for Protein: Q5T9S5

CCDC18, Coiled-coil domain-containing protein 18, humanhuman

Predictions only

Length 1,454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18Q5T9S5 RNU6-1041P-201ENST00000516254 102 ntBASIC-0.85□□□□□ -2.55
CCDC18Q5T9S5 MTND1P15-201ENST00000579262 949 ntBASIC-0.85□□□□□ -2.55
CCDC18Q5T9S5 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC-0.85□□□□□ -2.55
CCDC18Q5T9S5 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.85□□□□□ -2.55
CCDC18Q5T9S5 RNU4-76P-201ENST00000364509 141 ntBASIC-0.86□□□□□ -2.55
CCDC18Q5T9S5 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.86□□□□□ -2.55
CCDC18Q5T9S5 RNU6-575P-201ENST00000411326 105 ntBASIC-0.86□□□□□ -2.55
CCDC18Q5T9S5 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC-0.86□□□□□ -2.55
CCDC18Q5T9S5 MTCO2P18-201ENST00000457151 658 ntBASIC-0.86□□□□□ -2.55
CCDC18Q5T9S5 SRRM1P2-201ENST00000464531 1192 ntBASIC-0.86□□□□□ -2.55
CCDC18Q5T9S5 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC-0.86□□□□□ -2.55
CCDC18Q5T9S5 AC090049.2-201ENST00000550377 109 ntBASIC-0.86□□□□□ -2.55
CCDC18Q5T9S5 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC-0.86□□□□□ -2.55
CCDC18Q5T9S5 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC-0.86□□□□□ -2.55
CCDC18Q5T9S5 AL451046.2-201ENST00000403074 277 ntBASIC-0.86□□□□□ -2.55
CCDC18Q5T9S5 RBBP4P6-201ENST00000508098 202 ntBASIC-0.86□□□□□ -2.55
CCDC18Q5T9S5 SNORA18.1-201ENST00000363418 128 ntBASIC-0.87□□□□□ -2.55
CCDC18Q5T9S5 RNY4P16-201ENST00000364768 94 ntBASIC-0.87□□□□□ -2.55
CCDC18Q5T9S5 RNU6-1031P-201ENST00000384773 107 ntBASIC-0.87□□□□□ -2.55
CCDC18Q5T9S5 AL603865.2-201ENST00000401679 213 ntBASIC-0.87□□□□□ -2.55
CCDC18Q5T9S5 RNU6-735P-201ENST00000410612 107 ntBASIC-0.87□□□□□ -2.55
CCDC18Q5T9S5 AC091021.1-201ENST00000468051 388 ntBASIC-0.87□□□□□ -2.55
CCDC18Q5T9S5 RNU5F-2P-201ENST00000516066 82 ntBASIC-0.87□□□□□ -2.55
CCDC18Q5T9S5 RNU1-117P-201ENST00000517041 158 ntBASIC-0.87□□□□□ -2.55
CCDC18Q5T9S5 AC005176.2-201ENST00000596933 147 ntBASIC-0.87□□□□□ -2.55
CCDC18Q5T9S5 MIR6079-201ENST00000635807 62 ntBASIC-0.87□□□□□ -2.55
CCDC18Q5T9S5 RNU4-32P-201ENST00000363404 141 ntBASIC-0.88□□□□□ -2.55
CCDC18Q5T9S5 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.88□□□□□ -2.55
CCDC18Q5T9S5 MTND1P21-201ENST00000412991 285 ntBASIC-0.88□□□□□ -2.55
CCDC18Q5T9S5 TPMTP2-201ENST00000414372 726 ntBASIC-0.88□□□□□ -2.55
CCDC18Q5T9S5 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC-0.88□□□□□ -2.55
CCDC18Q5T9S5 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC-0.88□□□□□ -2.55
CCDC18Q5T9S5 MTND1P9-201ENST00000453775 944 ntBASIC-0.88□□□□□ -2.55
CCDC18Q5T9S5 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.88□□□□□ -2.55
CCDC18Q5T9S5 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.88□□□□□ -2.55
CCDC18Q5T9S5 TMEM251P1-201ENST00000503717 318 ntBASIC-0.88□□□□□ -2.55
CCDC18Q5T9S5 AC093809.1-201ENST00000509155 340 ntBASIC-0.88□□□□□ -2.55
CCDC18Q5T9S5 AC009902.1-201ENST00000519351 183 ntBASIC-0.88□□□□□ -2.55
CCDC18Q5T9S5 MTND2P7-201ENST00000521337 640 ntBASIC-0.88□□□□□ -2.55
CCDC18Q5T9S5 AP002001.1-203ENST00000534002 267 ntBASIC-0.88□□□□□ -2.55
CCDC18Q5T9S5 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC-0.88□□□□□ -2.55
CCDC18Q5T9S5 AC004223.2-201ENST00000590309 544 ntBASIC-0.88□□□□□ -2.55
CCDC18Q5T9S5 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC-0.89□□□□□ -2.55
CCDC18Q5T9S5 AC026782.1-201ENST00000512952 449 ntBASIC-0.89□□□□□ -2.55
CCDC18Q5T9S5 SNRPGP1-201ENST00000553864 222 ntBASIC-0.89□□□□□ -2.55
CCDC18Q5T9S5 MIR4743-201ENST00000584576 69 ntBASIC-0.89□□□□□ -2.55
CCDC18Q5T9S5 TTK-211ENST00000627129 240 ntTSL 5 BASIC-0.89□□□□□ -2.55
CCDC18Q5T9S5 RNU4-84P-201ENST00000364200 139 ntBASIC-0.9□□□□□ -2.55
CCDC18Q5T9S5 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.9□□□□□ -2.55
CCDC18Q5T9S5 RNA5SP323-201ENST00000391094 133 ntBASIC-0.9□□□□□ -2.55
CCDC18Q5T9S5 BTF3L4P1-201ENST00000413813 468 ntBASIC-0.9□□□□□ -2.55
CCDC18Q5T9S5 AC092170.1-201ENST00000440211 356 ntBASIC-0.9□□□□□ -2.55
CCDC18Q5T9S5 OFD1P3Y-201ENST00000453312 783 ntBASIC-0.9□□□□□ -2.55
CCDC18Q5T9S5 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC-0.9□□□□□ -2.55
CCDC18Q5T9S5 HMGN2P26-201ENST00000463169 339 ntBASIC-0.9□□□□□ -2.55
CCDC18Q5T9S5 MTCO1P31-201ENST00000506355 492 ntBASIC-0.9□□□□□ -2.55
CCDC18Q5T9S5 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-0.9□□□□□ -2.55
CCDC18Q5T9S5 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC-0.9□□□□□ -2.55
CCDC18Q5T9S5 AL159153.1-201ENST00000619688 317 ntBASIC-0.9□□□□□ -2.55
CCDC18Q5T9S5 SNORA72.2-201ENST00000365028 127 ntBASIC-0.91□□□□□ -2.55
CCDC18Q5T9S5 RNU6-756P-201ENST00000383997 107 ntBASIC-0.91□□□□□ -2.55
CCDC18Q5T9S5 RNU6-891P-201ENST00000384280 111 ntBASIC-0.91□□□□□ -2.55
CCDC18Q5T9S5 AL139421.1-201ENST00000423010 169 ntBASIC-0.91□□□□□ -2.55
CCDC18Q5T9S5 AL606517.1-201ENST00000446914 387 ntBASIC-0.91□□□□□ -2.55
CCDC18Q5T9S5 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC-0.91□□□□□ -2.55
CCDC18Q5T9S5 AC025678.1-201ENST00000567861 338 ntBASIC-0.91□□□□□ -2.55
CCDC18Q5T9S5 SNORA59B-202ENST00000578183 701 ntBASIC-0.91□□□□□ -2.55
CCDC18Q5T9S5 RNU6-28P-201ENST00000362378 107 ntBASIC-0.92□□□□□ -2.56
CCDC18Q5T9S5 SNORD32B-201ENST00000364460 84 ntBASIC-0.92□□□□□ -2.56
CCDC18Q5T9S5 MIR573-201ENST00000384964 99 ntBASIC-0.92□□□□□ -2.56
CCDC18Q5T9S5 TRIM60P5Y-201ENST00000413946 574 ntBASIC-0.92□□□□□ -2.56
CCDC18Q5T9S5 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC-0.92□□□□□ -2.56
CCDC18Q5T9S5 MTND2P33-201ENST00000506452 1031 ntBASIC-0.92□□□□□ -2.56
CCDC18Q5T9S5 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC-0.92□□□□□ -2.56
CCDC18Q5T9S5 RNU6-885P-201ENST00000516607 104 ntBASIC-0.92□□□□□ -2.56
CCDC18Q5T9S5 RNA5SP135-201ENST00000517019 125 ntBASIC-0.92□□□□□ -2.56
CCDC18Q5T9S5 MIR3681-201ENST00000580089 72 ntBASIC-0.92□□□□□ -2.56
CCDC18Q5T9S5 AL391903.3-201ENST00000612158 163 ntBASIC-0.92□□□□□ -2.56
CCDC18Q5T9S5 AC008759.3-201ENST00000613300 508 ntBASIC-0.92□□□□□ -2.56
CCDC18Q5T9S5 SEPT14P17-201ENST00000617978 177 ntBASIC-0.92□□□□□ -2.56
CCDC18Q5T9S5 AC099654.9-201ENST00000637055 678 ntBASIC-0.92□□□□□ -2.56
CCDC18Q5T9S5 RNU6-284P-201ENST00000411105 106 ntBASIC-0.92□□□□□ -2.56
CCDC18Q5T9S5 STAG3L5P-204ENST00000443759 179 ntBASIC-0.92□□□□□ -2.56
CCDC18Q5T9S5 RNU7-56P-201ENST00000458744 62 ntBASIC-0.92□□□□□ -2.56
CCDC18Q5T9S5 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC-0.92□□□□□ -2.56
CCDC18Q5T9S5 AL157871.3-201ENST00000557231 293 ntBASIC-0.92□□□□□ -2.56
CCDC18Q5T9S5 DPPA3P3-201ENST00000603842 430 ntBASIC-0.92□□□□□ -2.56
CCDC18Q5T9S5 AL034555.1-201ENST00000604816 211 ntBASIC-0.92□□□□□ -2.56
CCDC18Q5T9S5 AL603839.4-201ENST00000624658 1005 ntBASIC-0.92□□□□□ -2.56
CCDC18Q5T9S5 SNORA12.2-201ENST00000391040 156 ntBASIC-0.93□□□□□ -2.56
CCDC18Q5T9S5 FCF1P10-201ENST00000407590 479 ntBASIC-0.93□□□□□ -2.56
CCDC18Q5T9S5 RNA5SP118-201ENST00000410385 109 ntBASIC-0.93□□□□□ -2.56
CCDC18Q5T9S5 MTCO2P5-201ENST00000422621 426 ntBASIC-0.93□□□□□ -2.56
CCDC18Q5T9S5 AC010154.1-201ENST00000425857 269 ntBASIC-0.93□□□□□ -2.56
CCDC18Q5T9S5 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC-0.93□□□□□ -2.56
CCDC18Q5T9S5 snoU13.8-201ENST00000458890 104 ntBASIC-0.93□□□□□ -2.56
CCDC18Q5T9S5 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.93□□□□□ -2.56
CCDC18Q5T9S5 RNU6-143P-201ENST00000516942 93 ntBASIC-0.93□□□□□ -2.56
CCDC18Q5T9S5 AP001328.1-201ENST00000528550 176 ntBASIC-0.93□□□□□ -2.56
CCDC18Q5T9S5 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.93□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms