Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CCDC38Q502W7 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.59□□□□□ -2
CCDC38Q502W7 BX322639.1-202ENST00000423987 2213 ntBASIC2.58□□□□□ -2
CCDC38Q502W7 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.58□□□□□ -2
CCDC38Q502W7 RNU6-859P-201ENST00000362728 107 ntBASIC2.58□□□□□ -2
CCDC38Q502W7 Y_RNA.405-201ENST00000383979 100 ntBASIC2.58□□□□□ -2
CCDC38Q502W7 Y_RNA.451-201ENST00000384200 100 ntBASIC2.58□□□□□ -2
CCDC38Q502W7 Y_RNA.524-201ENST00000384564 100 ntBASIC2.58□□□□□ -2
CCDC38Q502W7 Y_RNA.561-201ENST00000384694 100 ntBASIC2.58□□□□□ -2
CCDC38Q502W7 MIR524-201ENST00000385242 87 ntBASIC2.58□□□□□ -2
CCDC38Q502W7 MT-TD-201ENST00000387419 68 ntBASIC2.58□□□□□ -2
CCDC38Q502W7 MTCYBP4-201ENST00000401524 249 ntBASIC2.58□□□□□ -2
CCDC38Q502W7 MIR320B2-201ENST00000408479 138 ntBASIC2.58□□□□□ -2
CCDC38Q502W7 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.58□□□□□ -2
CCDC38Q502W7 AC027124.2-201ENST00000428249 105 ntBASIC2.58□□□□□ -2
CCDC38Q502W7 AC097473.1-201ENST00000508142 408 ntBASIC2.58□□□□□ -2
CCDC38Q502W7 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.58□□□□□ -2
CCDC38Q502W7 SCARNA16.2-201ENST00000516520 172 ntBASIC2.58□□□□□ -2
CCDC38Q502W7 RNU6-1098P-201ENST00000516772 96 ntBASIC2.58□□□□□ -2
CCDC38Q502W7 RNU6-1213P-201ENST00000517075 94 ntBASIC2.58□□□□□ -2
CCDC38Q502W7 AL355375.2-201ENST00000574825 175 ntBASIC2.58□□□□□ -2
CCDC38Q502W7 MIR5701-3-201ENST00000578890 82 ntBASIC2.58□□□□□ -2
CCDC38Q502W7 MIR5701-1-201ENST00000585138 82 ntBASIC2.58□□□□□ -2
CCDC38Q502W7 AC022202.1-201ENST00000613515 211 ntBASIC2.58□□□□□ -2
CCDC38Q502W7 TCL6_2.1-201ENST00000615162 119 ntBASIC2.58□□□□□ -2
CCDC38Q502W7 MIR5701-2-201ENST00000615634 82 ntBASIC2.58□□□□□ -2
CCDC38Q502W7 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.58□□□□□ -2
CCDC38Q502W7 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CCDC38Q502W7 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CCDC38Q502W7 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CCDC38Q502W7 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.57□□□□□ -2
CCDC38Q502W7 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CCDC38Q502W7 RNY1P16-201ENST00000363063 111 ntBASIC2.57□□□□□ -2
CCDC38Q502W7 Y_RNA.319-201ENST00000365138 92 ntBASIC2.57□□□□□ -2
CCDC38Q502W7 RNU1-51P-201ENST00000365345 176 ntBASIC2.57□□□□□ -2
CCDC38Q502W7 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.57□□□□□ -2
CCDC38Q502W7 SNORA18.2-201ENST00000383865 132 ntBASIC2.57□□□□□ -2
CCDC38Q502W7 RNA5SP270-201ENST00000411361 118 ntBASIC2.57□□□□□ -2
CCDC38Q502W7 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.57□□□□□ -2
CCDC38Q502W7 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.57□□□□□ -2
CCDC38Q502W7 IFNA11P-201ENST00000446352 526 ntBASIC2.57□□□□□ -2
CCDC38Q502W7 AC245102.2-201ENST00000448956 180 ntBASIC2.57□□□□□ -2
CCDC38Q502W7 HMGN2P18-201ENST00000450680 270 ntBASIC2.57□□□□□ -2
CCDC38Q502W7 AC011753.1-201ENST00000451001 220 ntBASIC2.57□□□□□ -2
CCDC38Q502W7 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.57□□□□□ -2
CCDC38Q502W7 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.57□□□□□ -2
CCDC38Q502W7 AC093259.1-201ENST00000509755 300 ntBASIC2.57□□□□□ -2
CCDC38Q502W7 RNU6-991P-201ENST00000516168 107 ntBASIC2.57□□□□□ -2
CCDC38Q502W7 RNA5SP490-201ENST00000517141 136 ntBASIC2.57□□□□□ -2
CCDC38Q502W7 MIR4319-201ENST00000577285 85 ntBASIC2.57□□□□□ -2
CCDC38Q502W7 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.57□□□□□ -2
CCDC38Q502W7 AL031274.2-201ENST00000599419 203 ntBASIC2.57□□□□□ -2
CCDC38Q502W7 AC100812.1-201ENST00000607622 580 ntBASIC2.57□□□□□ -2
CCDC38Q502W7 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.57□□□□□ -2
CCDC38Q502W7 AL136360.1-201ENST00000503377 1900 ntBASIC2.56□□□□□ -2
CCDC38Q502W7 RNU6-310P-201ENST00000384655 107 ntBASIC2.56□□□□□ -2
CCDC38Q502W7 MIR487A-201ENST00000385009 80 ntBASIC2.56□□□□□ -2
CCDC38Q502W7 RNU6-700P-201ENST00000391043 107 ntBASIC2.56□□□□□ -2
CCDC38Q502W7 Y_RNA.646-201ENST00000410980 101 ntBASIC2.56□□□□□ -2
CCDC38Q502W7 RPL23AP50-201ENST00000434149 455 ntBASIC2.56□□□□□ -2
CCDC38Q502W7 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.56□□□□□ -2
CCDC38Q502W7 Y_RNA.653-201ENST00000459091 95 ntBASIC2.56□□□□□ -2
CCDC38Q502W7 RNU7-14P-201ENST00000459331 62 ntBASIC2.56□□□□□ -2
CCDC38Q502W7 AC096725.1-201ENST00000514266 313 ntBASIC2.56□□□□□ -2
CCDC38Q502W7 RNU2-44P-201ENST00000516795 194 ntBASIC2.56□□□□□ -2
CCDC38Q502W7 Y_RNA.706-201ENST00000516933 99 ntBASIC2.56□□□□□ -2
CCDC38Q502W7 RNU6-58P-201ENST00000517143 103 ntBASIC2.56□□□□□ -2
CCDC38Q502W7 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.56□□□□□ -2
CCDC38Q502W7 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.56□□□□□ -2
CCDC38Q502W7 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.56□□□□□ -2
CCDC38Q502W7 AC027288.2-201ENST00000553028 243 ntBASIC2.56□□□□□ -2
CCDC38Q502W7 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.56□□□□□ -2
CCDC38Q502W7 AC133104.2-201ENST00000615272 193 ntBASIC2.56□□□□□ -2
CCDC38Q502W7 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.56□□□□□ -2
CCDC38Q502W7 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.56□□□□□ -2
CCDC38Q502W7 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CCDC38Q502W7 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.56□□□□□ -2
CCDC38Q502W7 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.55□□□□□ -2
CCDC38Q502W7 RNU6-867P-201ENST00000364956 107 ntBASIC2.55□□□□□ -2
CCDC38Q502W7 RNU6-541P-201ENST00000384709 110 ntBASIC2.55□□□□□ -2
CCDC38Q502W7 SNORA40.19-201ENST00000390846 128 ntBASIC2.55□□□□□ -2
CCDC38Q502W7 SNORA75.6-201ENST00000391318 127 ntBASIC2.55□□□□□ -2
CCDC38Q502W7 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CCDC38Q502W7 MIR1262-201ENST00000408276 93 ntBASIC2.55□□□□□ -2
CCDC38Q502W7 RN7SKP284-201ENST00000411002 343 ntBASIC2.55□□□□□ -2
CCDC38Q502W7 RNA5SP184-201ENST00000411071 108 ntBASIC2.55□□□□□ -2
CCDC38Q502W7 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.55□□□□□ -2
CCDC38Q502W7 MTCYBP10-201ENST00000424905 650 ntBASIC2.55□□□□□ -2
CCDC38Q502W7 MTCO3P29-201ENST00000432119 779 ntBASIC2.55□□□□□ -2
CCDC38Q502W7 AL353997.1-201ENST00000432936 108 ntBASIC2.55□□□□□ -2
CCDC38Q502W7 AC004386.2-201ENST00000441858 148 ntBASIC2.55□□□□□ -2
CCDC38Q502W7 AC108938.1-201ENST00000451204 136 ntBASIC2.55□□□□□ -2
CCDC38Q502W7 ATP5EP1-201ENST00000510257 156 ntBASIC2.55□□□□□ -2
CCDC38Q502W7 MTND3P22-201ENST00000510932 243 ntBASIC2.55□□□□□ -2
CCDC38Q502W7 AC093303.1-201ENST00000514549 295 ntBASIC2.55□□□□□ -2
CCDC38Q502W7 DEFB131C-201ENST00000528817 165 ntBASIC2.55□□□□□ -2
CCDC38Q502W7 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.55□□□□□ -2
CCDC38Q502W7 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.55□□□□□ -2
CCDC38Q502W7 AC005336.3-201ENST00000623833 2679 ntBASIC2.55□□□□□ -2
CCDC38Q502W7 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms