Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 RNU6-514P-201ENST00000384208 107 ntBASIC-0.36□□□□□ -2.47
CCDC58Q4VC31 MIR520F-201ENST00000384824 87 ntBASIC-0.36□□□□□ -2.47
CCDC58Q4VC31 MIR598-201ENST00000384868 97 ntBASIC-0.36□□□□□ -2.47
CCDC58Q4VC31 MIR518A1-201ENST00000385068 85 ntBASIC-0.36□□□□□ -2.47
CCDC58Q4VC31 AL356583.2-201ENST00000426536 280 ntBASIC-0.36□□□□□ -2.47
CCDC58Q4VC31 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC-0.36□□□□□ -2.47
CCDC58Q4VC31 RPL37P21-201ENST00000435890 276 ntBASIC-0.36□□□□□ -2.47
CCDC58Q4VC31 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC-0.36□□□□□ -2.47
CCDC58Q4VC31 LINC01399-202ENST00000458450 244 ntBASIC-0.36□□□□□ -2.47
CCDC58Q4VC31 LRRC34P2-201ENST00000514850 553 ntBASIC-0.36□□□□□ -2.47
CCDC58Q4VC31 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.36□□□□□ -2.47
CCDC58Q4VC31 AC141557.1-201ENST00000540982 400 ntBASIC-0.36□□□□□ -2.47
CCDC58Q4VC31 AC087883.1-201ENST00000551882 391 ntBASIC-0.36□□□□□ -2.47
CCDC58Q4VC31 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.36□□□□□ -2.47
CCDC58Q4VC31 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC-0.36□□□□□ -2.47
CCDC58Q4VC31 AC234772.3-201ENST00000602277 528 ntBASIC-0.36□□□□□ -2.47
CCDC58Q4VC31 AC022217.4-201ENST00000604389 163 ntBASIC-0.36□□□□□ -2.47
CCDC58Q4VC31 SEPT14P17-201ENST00000617978 177 ntBASIC-0.36□□□□□ -2.47
CCDC58Q4VC31 MESTIT1_1.1-201ENST00000618871 140 ntBASIC-0.36□□□□□ -2.47
CCDC58Q4VC31 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC-0.36□□□□□ -2.47
CCDC58Q4VC31 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC-0.36□□□□□ -2.47
CCDC58Q4VC31 Y_RNA.116-201ENST00000363292 103 ntBASIC-0.37□□□□□ -2.47
CCDC58Q4VC31 Y_RNA.408-201ENST00000383987 102 ntBASIC-0.37□□□□□ -2.47
CCDC58Q4VC31 RN7SKP266-201ENST00000410232 287 ntBASIC-0.37□□□□□ -2.47
CCDC58Q4VC31 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC-0.37□□□□□ -2.47
CCDC58Q4VC31 AL590135.1-201ENST00000422215 156 ntBASIC-0.37□□□□□ -2.47
CCDC58Q4VC31 AL953862.1-201ENST00000423016 168 ntBASIC-0.37□□□□□ -2.47
CCDC58Q4VC31 AC019205.3-201ENST00000424573 156 ntBASIC-0.37□□□□□ -2.47
CCDC58Q4VC31 MTND1P20-201ENST00000430341 950 ntBASIC-0.37□□□□□ -2.47
CCDC58Q4VC31 AC016700.2-201ENST00000446011 156 ntBASIC-0.37□□□□□ -2.47
CCDC58Q4VC31 MTCO3P10-201ENST00000455912 772 ntBASIC-0.37□□□□□ -2.47
CCDC58Q4VC31 AC015911.1-201ENST00000495111 156 ntBASIC-0.37□□□□□ -2.47
CCDC58Q4VC31 RPL23AP54-201ENST00000495129 419 ntBASIC-0.37□□□□□ -2.47
CCDC58Q4VC31 RPS23P5-201ENST00000495419 428 ntBASIC-0.37□□□□□ -2.47
CCDC58Q4VC31 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.37□□□□□ -2.47
CCDC58Q4VC31 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.37□□□□□ -2.47
CCDC58Q4VC31 RNU6-1102P-201ENST00000516149 96 ntBASIC-0.37□□□□□ -2.47
CCDC58Q4VC31 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC-0.37□□□□□ -2.47
CCDC58Q4VC31 AC010620.1-201ENST00000601088 1102 ntBASIC-0.37□□□□□ -2.47
CCDC58Q4VC31 AC104408.1-201ENST00000605241 170 ntBASIC-0.37□□□□□ -2.47
CCDC58Q4VC31 PCGEM1.1-201ENST00000613431 131 ntBASIC-0.37□□□□□ -2.47
CCDC58Q4VC31 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC-0.37□□□□□ -2.47
CCDC58Q4VC31 TIMM9P2-201ENST00000419324 266 ntBASIC-0.38□□□□□ -2.47
CCDC58Q4VC31 AC007283.2-201ENST00000424739 197 ntBASIC-0.38□□□□□ -2.47
CCDC58Q4VC31 USP9YP28-201ENST00000435142 589 ntBASIC-0.38□□□□□ -2.47
CCDC58Q4VC31 MTCO2P7-201ENST00000446518 666 ntBASIC-0.38□□□□□ -2.47
CCDC58Q4VC31 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC-0.38□□□□□ -2.47
CCDC58Q4VC31 RBBP4P6-201ENST00000508098 202 ntBASIC-0.38□□□□□ -2.47
CCDC58Q4VC31 MIR3923-201ENST00000579521 83 ntBASIC-0.38□□□□□ -2.47
CCDC58Q4VC31 MIR4305-201ENST00000583252 102 ntBASIC-0.38□□□□□ -2.47
CCDC58Q4VC31 RNU6-527P-201ENST00000363425 104 ntBASIC-0.39□□□□□ -2.47
CCDC58Q4VC31 RNY4P16-201ENST00000364768 94 ntBASIC-0.39□□□□□ -2.47
CCDC58Q4VC31 MIR1827-201ENST00000408549 66 ntBASIC-0.39□□□□□ -2.47
CCDC58Q4VC31 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC-0.39□□□□□ -2.47
CCDC58Q4VC31 ZFAND6P1-201ENST00000434138 605 ntBASIC-0.39□□□□□ -2.47
CCDC58Q4VC31 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC-0.39□□□□□ -2.47
CCDC58Q4VC31 TPT1P7-201ENST00000458300 517 ntBASIC-0.39□□□□□ -2.47
CCDC58Q4VC31 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC-0.39□□□□□ -2.47
CCDC58Q4VC31 RNU6-551P-201ENST00000516661 103 ntBASIC-0.39□□□□□ -2.47
CCDC58Q4VC31 EIF4A1P12-201ENST00000551910 141 ntBASIC-0.39□□□□□ -2.47
CCDC58Q4VC31 TMF1P1-201ENST00000576058 373 ntBASIC-0.39□□□□□ -2.47
CCDC58Q4VC31 MIR548AC-201ENST00000585049 88 ntBASIC-0.39□□□□□ -2.47
CCDC58Q4VC31 RNU6-94P-201ENST00000607728 107 ntBASIC-0.39□□□□□ -2.47
CCDC58Q4VC31 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC-0.39□□□□□ -2.47
CCDC58Q4VC31 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC-0.39□□□□□ -2.47
CCDC58Q4VC31 AP000484.1-201ENST00000620067 1252 ntBASIC-0.39□□□□□ -2.47
CCDC58Q4VC31 AC091925.1-201ENST00000623204 462 ntBASIC-0.39□□□□□ -2.47
CCDC58Q4VC31 AC097372.5-201ENST00000623665 376 ntBASIC-0.39□□□□□ -2.47
CCDC58Q4VC31 MIR330-201ENST00000362196 94 ntBASIC-0.4□□□□□ -2.47
CCDC58Q4VC31 RNU5E-7P-201ENST00000365290 117 ntBASIC-0.4□□□□□ -2.47
CCDC58Q4VC31 RNU6-417P-201ENST00000384712 107 ntBASIC-0.4□□□□□ -2.47
CCDC58Q4VC31 RNU6-440P-201ENST00000390882 105 ntBASIC-0.4□□□□□ -2.47
CCDC58Q4VC31 RNA5SP467-201ENST00000391274 118 ntBASIC-0.4□□□□□ -2.47
CCDC58Q4VC31 SNORD71-201ENST00000411292 86 ntBASIC-0.4□□□□□ -2.47
CCDC58Q4VC31 STAG3L5P-204ENST00000443759 179 ntBASIC-0.4□□□□□ -2.47
CCDC58Q4VC31 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC-0.4□□□□□ -2.47
CCDC58Q4VC31 Y_RNA.689-201ENST00000516589 107 ntBASIC-0.4□□□□□ -2.47
CCDC58Q4VC31 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.4□□□□□ -2.47
CCDC58Q4VC31 AL512347.1-201ENST00000566420 503 ntBASIC-0.4□□□□□ -2.47
CCDC58Q4VC31 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC-0.4□□□□□ -2.47
CCDC58Q4VC31 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC-0.4□□□□□ -2.47
CCDC58Q4VC31 AC016911.1-201ENST00000613297 452 ntBASIC-0.4□□□□□ -2.47
CCDC58Q4VC31 AC007014.2-201ENST00000615581 479 ntBASIC-0.4□□□□□ -2.47
CCDC58Q4VC31 FRG1KP-201ENST00000623592 341 ntBASIC-0.4□□□□□ -2.47
CCDC58Q4VC31 AC073544.1-201ENST00000600110 1595 ntBASIC-0.4□□□□□ -2.47
CCDC58Q4VC31 Y_RNA.287-201ENST00000364853 94 ntBASIC-0.41□□□□□ -2.48
CCDC58Q4VC31 RNU6-946P-201ENST00000383878 107 ntBASIC-0.41□□□□□ -2.48
CCDC58Q4VC31 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.41□□□□□ -2.48
CCDC58Q4VC31 MIR573-201ENST00000384964 99 ntBASIC-0.41□□□□□ -2.48
CCDC58Q4VC31 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC-0.41□□□□□ -2.48
CCDC58Q4VC31 VPS26BP1-201ENST00000417155 755 ntBASIC-0.41□□□□□ -2.48
CCDC58Q4VC31 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC-0.41□□□□□ -2.48
CCDC58Q4VC31 RPS25P9-201ENST00000435591 252 ntBASIC-0.41□□□□□ -2.48
CCDC58Q4VC31 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC-0.41□□□□□ -2.48
CCDC58Q4VC31 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC-0.41□□□□□ -2.48
CCDC58Q4VC31 MTCO2P18-201ENST00000457151 658 ntBASIC-0.41□□□□□ -2.48
CCDC58Q4VC31 AC010469.2-201ENST00000496412 480 ntBASIC-0.41□□□□□ -2.48
CCDC58Q4VC31 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-0.41□□□□□ -2.48
CCDC58Q4VC31 AC025465.4-201ENST00000513422 638 ntBASIC-0.41□□□□□ -2.48
CCDC58Q4VC31 SNORA25.12-201ENST00000516202 82 ntBASIC-0.41□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 163.7 ms