Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.88□□□□□ -2.27
FOXF1Q12946 AC025449.1-201ENST00000603896 529 ntBASIC0.88□□□□□ -2.27
FOXF1Q12946 AC107304.1-201ENST00000604229 296 ntBASIC0.88□□□□□ -2.27
FOXF1Q12946 AL121890.5-201ENST00000620848 304 ntBASIC0.88□□□□□ -2.27
FOXF1Q12946 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.88□□□□□ -2.27
FOXF1Q12946 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.88□□□□□ -2.27
FOXF1Q12946 MIR302D-201ENST00000362275 68 ntBASIC0.87□□□□□ -2.27
FOXF1Q12946 Y_RNA.4-201ENST00000362333 112 ntBASIC0.87□□□□□ -2.27
FOXF1Q12946 Y_RNA.159-201ENST00000363674 87 ntBASIC0.87□□□□□ -2.27
FOXF1Q12946 RNU6-271P-201ENST00000363858 105 ntBASIC0.87□□□□□ -2.27
FOXF1Q12946 RNU6-1080P-201ENST00000383982 107 ntBASIC0.87□□□□□ -2.27
FOXF1Q12946 RPL37P10-201ENST00000412884 288 ntBASIC0.87□□□□□ -2.27
FOXF1Q12946 CDK8P2-201ENST00000415020 547 ntBASIC0.87□□□□□ -2.27
FOXF1Q12946 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC0.87□□□□□ -2.27
FOXF1Q12946 EBAG9P1-201ENST00000418955 543 ntBASIC0.87□□□□□ -2.27
FOXF1Q12946 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.87□□□□□ -2.27
FOXF1Q12946 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.87□□□□□ -2.27
FOXF1Q12946 JTBP1-201ENST00000441314 247 ntBASIC0.87□□□□□ -2.27
FOXF1Q12946 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.87□□□□□ -2.27
FOXF1Q12946 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
FOXF1Q12946 AL031274.1-201ENST00000450334 232 ntBASIC0.87□□□□□ -2.27
FOXF1Q12946 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.87□□□□□ -2.27
FOXF1Q12946 MTND1P27-201ENST00000451117 902 ntBASIC0.87□□□□□ -2.27
FOXF1Q12946 RPS27AP8-201ENST00000452665 445 ntBASIC0.87□□□□□ -2.27
FOXF1Q12946 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.87□□□□□ -2.27
FOXF1Q12946 RNU7-138P-201ENST00000459479 64 ntBASIC0.87□□□□□ -2.27
FOXF1Q12946 RPS26P55-201ENST00000471178 356 ntBASIC0.87□□□□□ -2.27
FOXF1Q12946 RPS23P4-201ENST00000487908 423 ntBASIC0.87□□□□□ -2.27
FOXF1Q12946 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.87□□□□□ -2.27
FOXF1Q12946 RNU6-1098P-201ENST00000516772 96 ntBASIC0.87□□□□□ -2.27
FOXF1Q12946 RNA5SP102-201ENST00000516865 106 ntBASIC0.87□□□□□ -2.27
FOXF1Q12946 RNU6-856P-201ENST00000516959 98 ntBASIC0.87□□□□□ -2.27
FOXF1Q12946 Y_RNA.717-201ENST00000517106 92 ntBASIC0.87□□□□□ -2.27
FOXF1Q12946 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.87□□□□□ -2.27
FOXF1Q12946 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC0.87□□□□□ -2.27
FOXF1Q12946 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.87□□□□□ -2.27
FOXF1Q12946 HIF1AP1-201ENST00000553642 175 ntBASIC0.87□□□□□ -2.27
FOXF1Q12946 AC103996.1-201ENST00000555468 102 ntBASIC0.87□□□□□ -2.27
FOXF1Q12946 SNORA77B-201ENST00000578179 125 ntBASIC0.87□□□□□ -2.27
FOXF1Q12946 MIR4424-201ENST00000585257 86 ntBASIC0.87□□□□□ -2.27
FOXF1Q12946 AC069114.2-201ENST00000604699 304 ntBASIC0.87□□□□□ -2.27
FOXF1Q12946 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.87□□□□□ -2.27
FOXF1Q12946 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.87□□□□□ -2.27
FOXF1Q12946 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.86□□□□□ -2.27
FOXF1Q12946 RNU6-562P-201ENST00000362731 107 ntBASIC0.86□□□□□ -2.27
FOXF1Q12946 SNORA63D-201ENST00000364359 132 ntBASIC0.86□□□□□ -2.27
FOXF1Q12946 SNORA25.8-201ENST00000364831 128 ntBASIC0.86□□□□□ -2.27
FOXF1Q12946 RNU6-438P-201ENST00000365561 103 ntBASIC0.86□□□□□ -2.27
FOXF1Q12946 MIR520A-201ENST00000384862 85 ntBASIC0.86□□□□□ -2.27
FOXF1Q12946 RNU6-1106P-201ENST00000390845 107 ntBASIC0.86□□□□□ -2.27
FOXF1Q12946 SNORA12.2-201ENST00000391040 156 ntBASIC0.86□□□□□ -2.27
FOXF1Q12946 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
FOXF1Q12946 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC0.86□□□□□ -2.27
FOXF1Q12946 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC0.86□□□□□ -2.27
FOXF1Q12946 AC012306.1-201ENST00000423267 114 ntBASIC0.86□□□□□ -2.27
FOXF1Q12946 AC069257.2-201ENST00000441819 155 ntBASIC0.86□□□□□ -2.27
FOXF1Q12946 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.86□□□□□ -2.27
FOXF1Q12946 AC073415.1-201ENST00000449240 153 ntBASIC0.86□□□□□ -2.27
FOXF1Q12946 RPS27P1-201ENST00000450552 247 ntBASIC0.86□□□□□ -2.27
FOXF1Q12946 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.86□□□□□ -2.27
FOXF1Q12946 MTND3P7-201ENST00000474435 343 ntBASIC0.86□□□□□ -2.27
FOXF1Q12946 AC079140.3-201ENST00000511111 550 ntBASIC0.86□□□□□ -2.27
FOXF1Q12946 AC067942.3-201ENST00000512025 362 ntBASIC0.86□□□□□ -2.27
FOXF1Q12946 RNA5SP481-201ENST00000516814 122 ntBASIC0.86□□□□□ -2.27
FOXF1Q12946 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC0.86□□□□□ -2.27
FOXF1Q12946 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.86□□□□□ -2.27
FOXF1Q12946 RAB11AP2-201ENST00000545905 639 ntBASIC0.86□□□□□ -2.27
FOXF1Q12946 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.86□□□□□ -2.27
FOXF1Q12946 AC005668.1-201ENST00000571142 476 ntBASIC0.86□□□□□ -2.27
FOXF1Q12946 AC087752.4-201ENST00000605911 462 ntBASIC0.86□□□□□ -2.27
FOXF1Q12946 AL355802.3-201ENST00000607571 545 ntBASIC0.86□□□□□ -2.27
FOXF1Q12946 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
FOXF1Q12946 AC136475.10-201ENST00000620253 385 ntBASIC0.86□□□□□ -2.27
FOXF1Q12946 AC068205.3-201ENST00000636385 468 ntBASIC0.86□□□□□ -2.27
FOXF1Q12946 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.86□□□□□ -2.27
FOXF1Q12946 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.86□□□□□ -2.27
FOXF1Q12946 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
FOXF1Q12946 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.85□□□□□ -2.27
FOXF1Q12946 RNU6-82P-201ENST00000363970 107 ntBASIC0.85□□□□□ -2.27
FOXF1Q12946 RNU6-1019P-201ENST00000364424 107 ntBASIC0.85□□□□□ -2.27
FOXF1Q12946 RNU6-378P-201ENST00000384324 107 ntBASIC0.85□□□□□ -2.27
FOXF1Q12946 MIR300-201ENST00000401138 83 ntBASIC0.85□□□□□ -2.27
FOXF1Q12946 AL161935.2-201ENST00000414627 60 ntBASIC0.85□□□□□ -2.27
FOXF1Q12946 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.85□□□□□ -2.27
FOXF1Q12946 CST2P1-201ENST00000425770 87 ntBASIC0.85□□□□□ -2.27
FOXF1Q12946 AC245047.4-201ENST00000433189 144 ntBASIC0.85□□□□□ -2.27
FOXF1Q12946 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.85□□□□□ -2.27
FOXF1Q12946 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.85□□□□□ -2.27
FOXF1Q12946 SNRPEP8-201ENST00000442866 260 ntBASIC0.85□□□□□ -2.27
FOXF1Q12946 ATP5J2P3-201ENST00000451550 258 ntBASIC0.85□□□□□ -2.27
FOXF1Q12946 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.85□□□□□ -2.27
FOXF1Q12946 MTCO2P18-201ENST00000457151 658 ntBASIC0.85□□□□□ -2.27
FOXF1Q12946 AC010531.2-201ENST00000465012 153 ntBASIC0.85□□□□□ -2.27
FOXF1Q12946 RPL9P9-202ENST00000466501 579 ntBASIC0.85□□□□□ -2.27
FOXF1Q12946 RPL30P7-201ENST00000479312 323 ntBASIC0.85□□□□□ -2.27
FOXF1Q12946 AL163973.1-201ENST00000484753 577 ntBASIC0.85□□□□□ -2.27
FOXF1Q12946 RPS23P5-201ENST00000495419 428 ntBASIC0.85□□□□□ -2.27
FOXF1Q12946 AC010486.2-201ENST00000505572 483 ntBASIC0.85□□□□□ -2.27
FOXF1Q12946 HMGB1P29-201ENST00000505659 499 ntBASIC0.85□□□□□ -2.27
FOXF1Q12946 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms