Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC0.11□□□□□ -2.39
ABCA4P78363 AC104408.1-201ENST00000605241 170 ntBASIC0.11□□□□□ -2.39
ABCA4P78363 AC021506.2-201ENST00000612354 169 ntBASIC0.11□□□□□ -2.39
ABCA4P78363 AC136475.10-201ENST00000620253 385 ntBASIC0.11□□□□□ -2.39
ABCA4P78363 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
ABCA4P78363 RNU6-236P-201ENST00000363886 106 ntBASIC0.11□□□□□ -2.39
ABCA4P78363 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.11□□□□□ -2.39
ABCA4P78363 MTCO1P17-201ENST00000411522 491 ntBASIC0.11□□□□□ -2.39
ABCA4P78363 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.11□□□□□ -2.39
ABCA4P78363 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.11□□□□□ -2.39
ABCA4P78363 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC0.11□□□□□ -2.39
ABCA4P78363 NDUFB1P2-201ENST00000449477 176 ntBASIC0.11□□□□□ -2.39
ABCA4P78363 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.11□□□□□ -2.39
ABCA4P78363 AC010531.2-201ENST00000465012 153 ntBASIC0.11□□□□□ -2.39
ABCA4P78363 AC098869.1-201ENST00000481627 292 ntBASIC0.11□□□□□ -2.39
ABCA4P78363 AC021231.3-201ENST00000558497 370 ntBASIC0.11□□□□□ -2.39
ABCA4P78363 AL031281.1-201ENST00000604049 488 ntBASIC0.11□□□□□ -2.39
ABCA4P78363 AL359547.2-201ENST00000615810 418 ntBASIC0.11□□□□□ -2.39
ABCA4P78363 SEPT14P17-201ENST00000617978 177 ntBASIC0.11□□□□□ -2.39
ABCA4P78363 7SK.10-201ENST00000621414 298 ntBASIC0.11□□□□□ -2.39
ABCA4P78363 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC0.1□□□□□ -2.39
ABCA4P78363 RNU4-15P-201ENST00000362613 141 ntBASIC0.1□□□□□ -2.39
ABCA4P78363 RNU4-9P-201ENST00000364951 139 ntBASIC0.1□□□□□ -2.39
ABCA4P78363 RNY3P13-201ENST00000365542 102 ntBASIC0.1□□□□□ -2.39
ABCA4P78363 RNY3P5-201ENST00000384127 102 ntBASIC0.1□□□□□ -2.39
ABCA4P78363 RNU6-348P-201ENST00000384386 107 ntBASIC0.1□□□□□ -2.39
ABCA4P78363 RNU6-163P-201ENST00000384396 106 ntBASIC0.1□□□□□ -2.39
ABCA4P78363 MIR544A-201ENST00000384855 91 ntBASIC0.1□□□□□ -2.39
ABCA4P78363 MIR140-201ENST00000385282 100 ntBASIC0.1□□□□□ -2.39
ABCA4P78363 SNORA75.2-201ENST00000391138 150 ntBASIC0.1□□□□□ -2.39
ABCA4P78363 SNORA75.3-201ENST00000391231 150 ntBASIC0.1□□□□□ -2.39
ABCA4P78363 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.1□□□□□ -2.39
ABCA4P78363 RNU6-922P-201ENST00000516753 99 ntBASIC0.1□□□□□ -2.39
ABCA4P78363 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.1□□□□□ -2.39
ABCA4P78363 AL132657.2-201ENST00000564417 358 ntBASIC0.1□□□□□ -2.39
ABCA4P78363 AC012507.3-201ENST00000603556 477 ntBASIC0.1□□□□□ -2.39
ABCA4P78363 SNORA25.18-201ENST00000607153 114 ntBASIC0.1□□□□□ -2.39
ABCA4P78363 AC097065.2-201ENST00000608159 533 ntBASIC0.1□□□□□ -2.39
ABCA4P78363 AC244015.1-201ENST00000622301 99 ntBASIC0.1□□□□□ -2.39
ABCA4P78363 AC112204.3-201ENST00000623822 332 ntBASIC0.1□□□□□ -2.39
ABCA4P78363 RNU6-654P-201ENST00000364373 107 ntBASIC0.1□□□□□ -2.39
ABCA4P78363 Y_RNA.288-201ENST00000364854 92 ntBASIC0.1□□□□□ -2.39
ABCA4P78363 RNU6-354P-201ENST00000383862 107 ntBASIC0.1□□□□□ -2.39
ABCA4P78363 RNU6-969P-201ENST00000383900 105 ntBASIC0.1□□□□□ -2.39
ABCA4P78363 SNORA36.2-201ENST00000384004 127 ntBASIC0.1□□□□□ -2.39
ABCA4P78363 Y_RNA.413-201ENST00000384007 102 ntBASIC0.1□□□□□ -2.39
ABCA4P78363 RNU6-207P-201ENST00000384137 107 ntBASIC0.1□□□□□ -2.39
ABCA4P78363 RNU6-610P-201ENST00000384264 107 ntBASIC0.1□□□□□ -2.39
ABCA4P78363 Y_RNA.514-201ENST00000384528 112 ntBASIC0.1□□□□□ -2.39
ABCA4P78363 MIR19A-201ENST00000384878 82 ntBASIC0.1□□□□□ -2.39
ABCA4P78363 RPS20P2-201ENST00000402520 389 ntBASIC0.1□□□□□ -2.39
ABCA4P78363 MTCYBP2-201ENST00000407745 171 ntBASIC0.1□□□□□ -2.39
ABCA4P78363 MIR1207-201ENST00000408249 87 ntBASIC0.1□□□□□ -2.39
ABCA4P78363 AC011233.1-201ENST00000422812 283 ntBASIC0.1□□□□□ -2.39
ABCA4P78363 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.1□□□□□ -2.39
ABCA4P78363 MTCO2P1-201ENST00000424648 477 ntBASIC0.1□□□□□ -2.39
ABCA4P78363 AL356583.2-201ENST00000426536 280 ntBASIC0.1□□□□□ -2.39
ABCA4P78363 HMGN2P34-201ENST00000437647 269 ntBASIC0.1□□□□□ -2.39
ABCA4P78363 AL049830.1-201ENST00000468034 425 ntBASIC0.1□□□□□ -2.39
ABCA4P78363 Y_RNA.754-201ENST00000476024 102 ntBASIC0.1□□□□□ -2.39
ABCA4P78363 RPS23P5-201ENST00000495419 428 ntBASIC0.1□□□□□ -2.39
ABCA4P78363 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.1□□□□□ -2.39
ABCA4P78363 MIR4768-201ENST00000585270 74 ntBASIC0.1□□□□□ -2.39
ABCA4P78363 uc_338.6-201ENST00000613544 171 ntBASIC0.1□□□□□ -2.39
ABCA4P78363 Y_RNA.790-201ENST00000614282 102 ntBASIC0.1□□□□□ -2.39
ABCA4P78363 Y_RNA.782-201ENST00000614695 102 ntBASIC0.1□□□□□ -2.39
ABCA4P78363 MIR6516-201ENST00000630554 81 ntBASIC0.1□□□□□ -2.39
ABCA4P78363 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.09□□□□□ -2.39
ABCA4P78363 SNORD114-11-201ENST00000363738 75 ntBASIC0.09□□□□□ -2.4
ABCA4P78363 RNU6-925P-201ENST00000384629 104 ntBASIC0.09□□□□□ -2.4
ABCA4P78363 AF228730.1-201ENST00000397972 663 ntBASIC0.09□□□□□ -2.4
ABCA4P78363 AC068587.4-201ENST00000533893 186 ntBASIC0.09□□□□□ -2.4
ABCA4P78363 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.09□□□□□ -2.4
ABCA4P78363 VN1R87P-201ENST00000596706 487 ntBASIC0.09□□□□□ -2.4
ABCA4P78363 AC104073.3-201ENST00000610942 955 ntBASIC0.09□□□□□ -2.4
ABCA4P78363 AC026585.1-201ENST00000619582 524 ntBASIC0.09□□□□□ -2.4
ABCA4P78363 MIR8054-201ENST00000620877 86 ntBASIC0.09□□□□□ -2.4
ABCA4P78363 MTND5P33-201ENST00000571250 1450 ntBASIC0.09□□□□□ -2.4
ABCA4P78363 RNU6-302P-201ENST00000365249 107 ntBASIC0.08□□□□□ -2.4
ABCA4P78363 RNU5E-6P-201ENST00000365574 115 ntBASIC0.08□□□□□ -2.4
ABCA4P78363 SNORA80D-201ENST00000384488 135 ntBASIC0.08□□□□□ -2.4
ABCA4P78363 RNU6-1067P-201ENST00000384752 107 ntBASIC0.08□□□□□ -2.4
ABCA4P78363 AL603865.2-201ENST00000401679 213 ntBASIC0.08□□□□□ -2.4
ABCA4P78363 VPS26BP1-201ENST00000417155 755 ntBASIC0.08□□□□□ -2.4
ABCA4P78363 RPL23AP30-201ENST00000432419 501 ntBASIC0.08□□□□□ -2.4
ABCA4P78363 FABP5P4-201ENST00000437203 171 ntBASIC0.08□□□□□ -2.4
ABCA4P78363 SNORD57-201ENST00000448188 72 ntBASIC0.08□□□□□ -2.4
ABCA4P78363 AC027338.1-201ENST00000514840 825 ntBASIC0.08□□□□□ -2.4
ABCA4P78363 MTND2P7-201ENST00000521337 640 ntBASIC0.08□□□□□ -2.4
ABCA4P78363 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.08□□□□□ -2.4
ABCA4P78363 MIR5695-201ENST00000579717 85 ntBASIC0.08□□□□□ -2.4
ABCA4P78363 AL360219.1-201ENST00000610230 366 ntBASIC0.08□□□□□ -2.4
ABCA4P78363 AC093875.1-201ENST00000623688 504 ntBASIC0.08□□□□□ -2.4
ABCA4P78363 MIR101-1-201ENST00000362265 75 ntBASIC0.08□□□□□ -2.4
ABCA4P78363 Y_RNA.124-201ENST00000363339 93 ntBASIC0.08□□□□□ -2.4
ABCA4P78363 Y_RNA.408-201ENST00000383987 102 ntBASIC0.08□□□□□ -2.4
ABCA4P78363 SNORA12.2-201ENST00000391040 156 ntBASIC0.08□□□□□ -2.4
ABCA4P78363 RNU6-293P-201ENST00000411259 106 ntBASIC0.08□□□□□ -2.4
ABCA4P78363 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.08□□□□□ -2.4
ABCA4P78363 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms