Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC0.46□□□□□ -2.34
TPM4P67936 AC080078.2-201ENST00000603766 501 ntBASIC0.46□□□□□ -2.34
TPM4P67936 AC104458.1-201ENST00000608243 463 ntBASIC0.46□□□□□ -2.34
TPM4P67936 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.46□□□□□ -2.34
TPM4P67936 AL603839.4-201ENST00000624658 1005 ntBASIC0.46□□□□□ -2.34
TPM4P67936 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
TPM4P67936 MIR96-201ENST00000362288 78 ntBASIC0.45□□□□□ -2.34
TPM4P67936 RNU6-975P-201ENST00000384296 105 ntBASIC0.45□□□□□ -2.34
TPM4P67936 Y_RNA.576-201ENST00000384781 102 ntBASIC0.45□□□□□ -2.34
TPM4P67936 MIR653-201ENST00000385279 96 ntBASIC0.45□□□□□ -2.34
TPM4P67936 RNA5SP467-201ENST00000391274 118 ntBASIC0.45□□□□□ -2.34
TPM4P67936 AL117339.3-201ENST00000418733 162 ntBASIC0.45□□□□□ -2.34
TPM4P67936 MTND1P20-201ENST00000430341 950 ntBASIC0.45□□□□□ -2.34
TPM4P67936 AC016717.1-201ENST00000448918 286 ntBASIC0.45□□□□□ -2.34
TPM4P67936 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.45□□□□□ -2.34
TPM4P67936 AC113410.1-201ENST00000505029 247 ntBASIC0.45□□□□□ -2.34
TPM4P67936 MTND4LP18-201ENST00000526864 291 ntBASIC0.45□□□□□ -2.34
TPM4P67936 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.45□□□□□ -2.34
TPM4P67936 AC007834.2-201ENST00000536310 343 ntBASIC0.45□□□□□ -2.34
TPM4P67936 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.45□□□□□ -2.34
TPM4P67936 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.45□□□□□ -2.34
TPM4P67936 AL359697.1-201ENST00000624879 587 ntBASIC0.45□□□□□ -2.34
TPM4P67936 AL445984.1-201ENST00000637834 659 ntBASIC0.45□□□□□ -2.34
TPM4P67936 AC013437.2-201ENST00000639587 677 ntBASIC0.45□□□□□ -2.34
TPM4P67936 ELL2P3-201ENST00000457883 1602 ntBASIC0.45□□□□□ -2.34
TPM4P67936 RNY1P10-201ENST00000363268 113 ntBASIC0.44□□□□□ -2.34
TPM4P67936 RNU4-76P-201ENST00000364509 141 ntBASIC0.44□□□□□ -2.34
TPM4P67936 RNU6-1000P-201ENST00000391066 106 ntBASIC0.44□□□□□ -2.34
TPM4P67936 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.44□□□□□ -2.34
TPM4P67936 ELOCP4-201ENST00000420090 333 ntBASIC0.44□□□□□ -2.34
TPM4P67936 AC090960.1-201ENST00000421072 306 ntBASIC0.44□□□□□ -2.34
TPM4P67936 AC012306.1-201ENST00000423267 114 ntBASIC0.44□□□□□ -2.34
TPM4P67936 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.44□□□□□ -2.34
TPM4P67936 FABP5P4-201ENST00000437203 171 ntBASIC0.44□□□□□ -2.34
TPM4P67936 HMGB1P29-201ENST00000505659 499 ntBASIC0.44□□□□□ -2.34
TPM4P67936 LRRC34P2-201ENST00000514850 553 ntBASIC0.44□□□□□ -2.34
TPM4P67936 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.44□□□□□ -2.34
TPM4P67936 AC022217.4-201ENST00000604389 163 ntBASIC0.44□□□□□ -2.34
TPM4P67936 AL031775.1-201ENST00000607014 887 ntBASIC0.44□□□□□ -2.34
TPM4P67936 RNA5SP347-201ENST00000362445 119 ntBASIC0.43□□□□□ -2.34
TPM4P67936 U3.8-201ENST00000363675 217 ntBASIC0.43□□□□□ -2.34
TPM4P67936 RNU1-93P-201ENST00000364704 169 ntBASIC0.43□□□□□ -2.34
TPM4P67936 RNU6-945P-201ENST00000383947 107 ntBASIC0.43□□□□□ -2.34
TPM4P67936 RNU6-116P-201ENST00000384042 109 ntBASIC0.43□□□□□ -2.34
TPM4P67936 RNU6-321P-201ENST00000410912 106 ntBASIC0.43□□□□□ -2.34
TPM4P67936 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.43□□□□□ -2.34
TPM4P67936 AC244023.1-201ENST00000426884 112 ntBASIC0.43□□□□□ -2.34
TPM4P67936 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC0.43□□□□□ -2.34
TPM4P67936 RPEP5-201ENST00000441137 268 ntBASIC0.43□□□□□ -2.34
TPM4P67936 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.43□□□□□ -2.34
TPM4P67936 RNU7-90P-201ENST00000459216 62 ntBASIC0.43□□□□□ -2.34
TPM4P67936 AC010486.2-201ENST00000505572 483 ntBASIC0.43□□□□□ -2.34
TPM4P67936 MTND2P31-201ENST00000512602 616 ntBASIC0.43□□□□□ -2.34
TPM4P67936 RNU6-947P-201ENST00000516264 106 ntBASIC0.43□□□□□ -2.34
TPM4P67936 AP003181.2-201ENST00000528941 181 ntBASIC0.43□□□□□ -2.34
TPM4P67936 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.43□□□□□ -2.34
TPM4P67936 MIR4498-201ENST00000577599 66 ntBASIC0.43□□□□□ -2.34
TPM4P67936 AC242498.1-201ENST00000604134 111 ntBASIC0.43□□□□□ -2.34
TPM4P67936 AC012557.2-201ENST00000605919 418 ntBASIC0.43□□□□□ -2.34
TPM4P67936 MIR6715A-201ENST00000615929 79 ntBASIC0.43□□□□□ -2.34
TPM4P67936 AC243994.1-201ENST00000618627 109 ntBASIC0.43□□□□□ -2.34
TPM4P67936 MIR8054-201ENST00000620877 86 ntBASIC0.43□□□□□ -2.34
TPM4P67936 SNORA43.4-201ENST00000629559 138 ntBASIC0.43□□□□□ -2.34
TPM4P67936 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.43□□□□□ -2.34
TPM4P67936 CASC19-280ENST00000642102 1351 ntBASIC0.43□□□□□ -2.34
TPM4P67936 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.42□□□□□ -2.34
TPM4P67936 RNU6-533P-201ENST00000384144 107 ntBASIC0.42□□□□□ -2.34
TPM4P67936 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
TPM4P67936 SNORA12.1-201ENST00000390873 148 ntBASIC0.42□□□□□ -2.34
TPM4P67936 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.42□□□□□ -2.34
TPM4P67936 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.42□□□□□ -2.34
TPM4P67936 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.42□□□□□ -2.34
TPM4P67936 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.42□□□□□ -2.34
TPM4P67936 RNU6-1069P-201ENST00000516612 133 ntBASIC0.42□□□□□ -2.34
TPM4P67936 AL391840.1-201ENST00000571144 367 ntBASIC0.42□□□□□ -2.34
TPM4P67936 AC104984.5-201ENST00000586878 94 ntBASIC0.42□□□□□ -2.34
TPM4P67936 AL359999.1-201ENST00000604513 294 ntBASIC0.42□□□□□ -2.34
TPM4P67936 AC006001.4-201ENST00000622243 395 ntBASIC0.42□□□□□ -2.34
TPM4P67936 RNA5SP499-201ENST00000363982 119 ntBASIC0.41□□□□□ -2.34
TPM4P67936 RNU6-1303P-201ENST00000364841 107 ntBASIC0.41□□□□□ -2.34
TPM4P67936 SNORA50A-201ENST00000384225 134 ntBASIC0.41□□□□□ -2.34
TPM4P67936 MIR660-201ENST00000385235 97 ntBASIC0.41□□□□□ -2.34
TPM4P67936 RNU6-1093P-201ENST00000391194 107 ntBASIC0.41□□□□□ -2.34
TPM4P67936 RNU2-8P-201ENST00000410727 190 ntBASIC0.41□□□□□ -2.34
TPM4P67936 MTCO2P21-201ENST00000419780 677 ntBASIC0.41□□□□□ -2.34
TPM4P67936 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC0.41□□□□□ -2.34
TPM4P67936 AC092628.1-201ENST00000436250 252 ntBASIC0.41□□□□□ -2.34
TPM4P67936 SNRPFP3-201ENST00000457792 225 ntBASIC0.41□□□□□ -2.34
TPM4P67936 HSPE1P23-201ENST00000509838 286 ntBASIC0.41□□□□□ -2.34
TPM4P67936 RNU6-229P-201ENST00000516614 102 ntBASIC0.41□□□□□ -2.34
TPM4P67936 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
TPM4P67936 AC090049.2-201ENST00000550377 109 ntBASIC0.41□□□□□ -2.34
TPM4P67936 MIR4714-201ENST00000580728 77 ntBASIC0.41□□□□□ -2.34
TPM4P67936 AC146944.4-201ENST00000602697 718 ntBASIC0.41□□□□□ -2.34
TPM4P67936 Z99497.2-201ENST00000603634 310 ntBASIC0.41□□□□□ -2.34
TPM4P67936 AP001836.1-201ENST00000604675 523 ntBASIC0.41□□□□□ -2.34
TPM4P67936 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.41□□□□□ -2.34
TPM4P67936 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.41□□□□□ -2.34
TPM4P67936 U6.108-201ENST00000637764 58 ntBASIC0.41□□□□□ -2.34
TPM4P67936 SNORD115-7-201ENST00000365306 82 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms