Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 DNAJA1P2-201ENST00000421360 1197 ntBASIC-1.64□□□□□ -2.67
RPL39P62891 AC010424.1-201ENST00000506336 297 ntBASIC-1.64□□□□□ -2.67
RPL39P62891 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC-1.64□□□□□ -2.67
RPL39P62891 OR8K2P-201ENST00000524645 927 ntBASIC-1.64□□□□□ -2.67
RPL39P62891 AC063944.3-201ENST00000609969 533 ntBASIC-1.64□□□□□ -2.67
RPL39P62891 AL096861.1-201ENST00000610899 123 ntBASIC-1.64□□□□□ -2.67
RPL39P62891 AC087588.2-201ENST00000617667 426 ntBASIC-1.64□□□□□ -2.67
RPL39P62891 AL356596.1-201ENST00000624230 379 ntBASIC-1.64□□□□□ -2.67
RPL39P62891 SNORA36.1-201ENST00000363424 132 ntBASIC-1.65□□□□□ -2.67
RPL39P62891 Y_RNA.374-201ENST00000365606 101 ntBASIC-1.65□□□□□ -2.67
RPL39P62891 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC-1.65□□□□□ -2.67
RPL39P62891 RNU6-98P-201ENST00000384173 107 ntBASIC-1.65□□□□□ -2.67
RPL39P62891 MIR873-201ENST00000401120 77 ntBASIC-1.65□□□□□ -2.67
RPL39P62891 AL953862.1-201ENST00000423016 168 ntBASIC-1.65□□□□□ -2.67
RPL39P62891 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC-1.65□□□□□ -2.67
RPL39P62891 AC109327.2-201ENST00000448339 378 ntBASIC-1.65□□□□□ -2.67
RPL39P62891 AC013828.1-201ENST00000481845 158 ntBASIC-1.65□□□□□ -2.67
RPL39P62891 RNU6-703P-201ENST00000516946 107 ntBASIC-1.65□□□□□ -2.67
RPL39P62891 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.65□□□□□ -2.67
RPL39P62891 AC100830.2-201ENST00000581636 240 ntBASIC-1.65□□□□□ -2.67
RPL39P62891 AL136363.2-201ENST00000604173 851 ntBASIC-1.65□□□□□ -2.67
RPL39P62891 AC242628.1-201ENST00000606810 391 ntBASIC-1.65□□□□□ -2.67
RPL39P62891 MIR655-201ENST00000362159 97 ntBASIC-1.66□□□□□ -2.68
RPL39P62891 RNU6-1031P-201ENST00000384773 107 ntBASIC-1.66□□□□□ -2.68
RPL39P62891 RNU2-47P-201ENST00000410649 186 ntBASIC-1.66□□□□□ -2.68
RPL39P62891 AC023512.1-201ENST00000444513 499 ntBASIC-1.66□□□□□ -2.68
RPL39P62891 AC116655.1-201ENST00000508324 901 ntBASIC-1.66□□□□□ -2.68
RPL39P62891 MIR4324-201ENST00000584846 72 ntBASIC-1.66□□□□□ -2.68
RPL39P62891 AC245008.1-201ENST00000608123 476 ntBASIC-1.66□□□□□ -2.68
RPL39P62891 AC004067.1-201ENST00000608733 700 ntBASIC-1.66□□□□□ -2.68
RPL39P62891 AC013476.2-201ENST00000614456 459 ntBASIC-1.66□□□□□ -2.68
RPL39P62891 MIR6514-201ENST00000622549 70 ntBASIC-1.66□□□□□ -2.68
RPL39P62891 MIR6086-201ENST00000638065 55 ntBASIC-1.66□□□□□ -2.68
RPL39P62891 RNU6-369P-201ENST00000362515 102 ntBASIC-1.67□□□□□ -2.68
RPL39P62891 RNU6-1141P-201ENST00000364520 107 ntBASIC-1.67□□□□□ -2.68
RPL39P62891 Y_RNA.433-201ENST00000384089 102 ntBASIC-1.67□□□□□ -2.68
RPL39P62891 RNU6-658P-201ENST00000384606 106 ntBASIC-1.67□□□□□ -2.68
RPL39P62891 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC-1.67□□□□□ -2.68
RPL39P62891 USP9YP22-201ENST00000438971 294 ntBASIC-1.67□□□□□ -2.68
RPL39P62891 RNU6-390P-201ENST00000516259 103 ntBASIC-1.67□□□□□ -2.68
RPL39P62891 RNU2-46P-201ENST00000517038 113 ntBASIC-1.67□□□□□ -2.68
RPL39P62891 DEFB131D-201ENST00000526803 184 ntBASIC-1.67□□□□□ -2.68
RPL39P62891 DEFB131C-201ENST00000528817 165 ntBASIC-1.67□□□□□ -2.68
RPL39P62891 AP003168.1-201ENST00000530091 307 ntBASIC-1.67□□□□□ -2.68
RPL39P62891 AL929325.1-201ENST00000603096 117 ntBASIC-1.67□□□□□ -2.68
RPL39P62891 NEAT1_2.1-201ENST00000620525 105 ntBASIC-1.67□□□□□ -2.68
RPL39P62891 SNORD113.3-201ENST00000364630 78 ntBASIC-1.68□□□□□ -2.68
RPL39P62891 RNU6-187P-201ENST00000384139 106 ntBASIC-1.68□□□□□ -2.68
RPL39P62891 CBX3P9-201ENST00000402326 552 ntBASIC-1.68□□□□□ -2.68
RPL39P62891 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC-1.68□□□□□ -2.68
RPL39P62891 MTATP6P27-201ENST00000416987 621 ntBASIC-1.68□□□□□ -2.68
RPL39P62891 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC-1.68□□□□□ -2.68
RPL39P62891 USP9YP11-201ENST00000427537 717 ntBASIC-1.68□□□□□ -2.68
RPL39P62891 HMGN1P33-201ENST00000432945 451 ntBASIC-1.68□□□□□ -2.68
RPL39P62891 ZNF736P1Y-201ENST00000440402 1276 ntBASIC-1.68□□□□□ -2.68
RPL39P62891 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC-1.68□□□□□ -2.68
RPL39P62891 AC007327.1-201ENST00000447461 264 ntBASIC-1.68□□□□□ -2.68
RPL39P62891 RNU6-274P-201ENST00000459566 107 ntBASIC-1.68□□□□□ -2.68
RPL39P62891 AL163973.1-201ENST00000484753 577 ntBASIC-1.68□□□□□ -2.68
RPL39P62891 RNU6-202P-201ENST00000515998 96 ntBASIC-1.68□□□□□ -2.68
RPL39P62891 RNA5SP395-201ENST00000516567 118 ntBASIC-1.68□□□□□ -2.68
RPL39P62891 TMF1P1-201ENST00000576058 373 ntBASIC-1.68□□□□□ -2.68
RPL39P62891 AL442067.1-201ENST00000613261 223 ntBASIC-1.68□□□□□ -2.68
RPL39P62891 RNU6-655P-201ENST00000362858 107 ntBASIC-1.69□□□□□ -2.68
RPL39P62891 SNORD32A-201ENST00000364805 84 ntBASIC-1.69□□□□□ -2.68
RPL39P62891 RNU6-10P-201ENST00000384036 107 ntBASIC-1.69□□□□□ -2.68
RPL39P62891 RNU6-15P-201ENST00000384534 107 ntBASIC-1.69□□□□□ -2.68
RPL39P62891 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.69□□□□□ -2.68
RPL39P62891 MIR649-201ENST00000384843 97 ntBASIC-1.69□□□□□ -2.68
RPL39P62891 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC-1.69□□□□□ -2.68
RPL39P62891 ELOCP14-201ENST00000428070 331 ntBASIC-1.69□□□□□ -2.68
RPL39P62891 ELOCP7-201ENST00000439968 331 ntBASIC-1.69□□□□□ -2.68
RPL39P62891 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-1.69□□□□□ -2.68
RPL39P62891 MRPS36P5-201ENST00000551909 298 ntBASIC-1.69□□□□□ -2.68
RPL39P62891 MIR3165-201ENST00000579874 75 ntBASIC-1.69□□□□□ -2.68
RPL39P62891 AL513423.1-201ENST00000621695 132 ntBASIC-1.69□□□□□ -2.68
RPL39P62891 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC-1.69□□□□□ -2.68
RPL39P62891 RNU6-199P-201ENST00000362954 107 ntBASIC-1.7□□□□□ -2.68
RPL39P62891 RNU4-36P-201ENST00000364294 144 ntBASIC-1.7□□□□□ -2.68
RPL39P62891 SNORA26-201ENST00000391286 122 ntBASIC-1.7□□□□□ -2.68
RPL39P62891 SNORD100-201ENST00000408573 76 ntBASIC-1.7□□□□□ -2.68
RPL39P62891 AL663109.1-201ENST00000411498 844 ntBASIC-1.7□□□□□ -2.68
RPL39P62891 RNA5SP290-201ENST00000517133 127 ntBASIC-1.7□□□□□ -2.68
RPL39P62891 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC-1.7□□□□□ -2.68
RPL39P62891 UBE2Q2P8-201ENST00000560644 102 ntBASIC-1.7□□□□□ -2.68
RPL39P62891 AP001429.1-201ENST00000602568 530 ntBASIC-1.7□□□□□ -2.68
RPL39P62891 AL603839.4-201ENST00000624658 1005 ntBASIC-1.7□□□□□ -2.68
RPL39P62891 AC017104.5-201ENST00000637647 639 ntBASIC-1.7□□□□□ -2.68
RPL39P62891 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC-1.7□□□□□ -2.68
RPL39P62891 RNU1-76P-201ENST00000362903 159 ntBASIC-1.71□□□□□ -2.68
RPL39P62891 RNU6-444P-201ENST00000383988 108 ntBASIC-1.71□□□□□ -2.68
RPL39P62891 SNORA26.3-201ENST00000391119 136 ntBASIC-1.71□□□□□ -2.68
RPL39P62891 MIR1303-201ENST00000408625 86 ntBASIC-1.71□□□□□ -2.68
RPL39P62891 Y_RNA.597-201ENST00000410463 100 ntBASIC-1.71□□□□□ -2.68
RPL39P62891 PPP1R11P2-201ENST00000423543 382 ntBASIC-1.71□□□□□ -2.68
RPL39P62891 FAM204CP-201ENST00000424489 642 ntBASIC-1.71□□□□□ -2.68
RPL39P62891 MTCO1P5-201ENST00000433573 344 ntBASIC-1.71□□□□□ -2.68
RPL39P62891 AC022960.3-201ENST00000619794 441 ntBASIC-1.71□□□□□ -2.68
RPL39P62891 Y_RNA.518-201ENST00000384552 113 ntBASIC-1.72□□□□□ -2.68
RPL39P62891 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-1.72□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms