Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 AL445984.1-201ENST00000637834 659 ntBASIC0.41□□□□□ -2.34
SPCS3P61009 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
SPCS3P61009 SNORD18A-201ENST00000363753 72 ntBASIC0.4□□□□□ -2.35
SPCS3P61009 RNU6-116P-201ENST00000384042 109 ntBASIC0.4□□□□□ -2.35
SPCS3P61009 RNU6-533P-201ENST00000384144 107 ntBASIC0.4□□□□□ -2.35
SPCS3P61009 RNU6-17P-201ENST00000384245 107 ntBASIC0.4□□□□□ -2.35
SPCS3P61009 RNU6-18P-201ENST00000384527 107 ntBASIC0.4□□□□□ -2.35
SPCS3P61009 RNA5SP323-201ENST00000391094 133 ntBASIC0.4□□□□□ -2.35
SPCS3P61009 RNA5SP467-201ENST00000391274 118 ntBASIC0.4□□□□□ -2.35
SPCS3P61009 AL117339.3-201ENST00000418733 162 ntBASIC0.4□□□□□ -2.35
SPCS3P61009 AC012306.1-201ENST00000423267 114 ntBASIC0.4□□□□□ -2.35
SPCS3P61009 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.4□□□□□ -2.35
SPCS3P61009 TIMM9P3-201ENST00000428659 274 ntBASIC0.4□□□□□ -2.35
SPCS3P61009 AC016717.1-201ENST00000448918 286 ntBASIC0.4□□□□□ -2.35
SPCS3P61009 AL133217.1-201ENST00000450980 425 ntBASIC0.4□□□□□ -2.35
SPCS3P61009 HSPE1P23-201ENST00000509838 286 ntBASIC0.4□□□□□ -2.35
SPCS3P61009 LRRC34P2-201ENST00000514850 553 ntBASIC0.4□□□□□ -2.35
SPCS3P61009 AC011604.1-201ENST00000545978 196 ntBASIC0.4□□□□□ -2.35
SPCS3P61009 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.4□□□□□ -2.35
SPCS3P61009 CYP3A137P-201ENST00000562436 69 ntBASIC0.4□□□□□ -2.35
SPCS3P61009 AC091489.2-201ENST00000566263 604 ntBASIC0.4□□□□□ -2.35
SPCS3P61009 AC080078.2-201ENST00000603766 501 ntBASIC0.4□□□□□ -2.35
SPCS3P61009 AL603839.4-201ENST00000624658 1005 ntBASIC0.4□□□□□ -2.35
SPCS3P61009 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.39□□□□□ -2.35
SPCS3P61009 SNORD115-7-201ENST00000365306 82 ntBASIC0.39□□□□□ -2.35
SPCS3P61009 RNU6-975P-201ENST00000384296 105 ntBASIC0.39□□□□□ -2.35
SPCS3P61009 MIR653-201ENST00000385279 96 ntBASIC0.39□□□□□ -2.35
SPCS3P61009 SNORD41-201ENST00000386967 70 ntBASIC0.39□□□□□ -2.35
SPCS3P61009 RNU6-321P-201ENST00000410912 106 ntBASIC0.39□□□□□ -2.35
SPCS3P61009 AC090960.1-201ENST00000421072 306 ntBASIC0.39□□□□□ -2.35
SPCS3P61009 RNU7-21P-201ENST00000459430 62 ntBASIC0.39□□□□□ -2.35
SPCS3P61009 AC010486.2-201ENST00000505572 483 ntBASIC0.39□□□□□ -2.35
SPCS3P61009 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.39□□□□□ -2.35
SPCS3P61009 AC108729.3-201ENST00000513484 108 ntBASIC0.39□□□□□ -2.35
SPCS3P61009 AC018659.1-201ENST00000551083 169 ntBASIC0.39□□□□□ -2.35
SPCS3P61009 AC104984.5-201ENST00000586878 94 ntBASIC0.39□□□□□ -2.35
SPCS3P61009 AL359999.1-201ENST00000604513 294 ntBASIC0.39□□□□□ -2.35
SPCS3P61009 AL359697.1-201ENST00000624879 587 ntBASIC0.39□□□□□ -2.35
SPCS3P61009 AL138960.2-201ENST00000625145 535 ntBASIC0.39□□□□□ -2.35
SPCS3P61009 SNORA43.4-201ENST00000629559 138 ntBASIC0.39□□□□□ -2.35
SPCS3P61009 MIR96-201ENST00000362288 78 ntBASIC0.38□□□□□ -2.35
SPCS3P61009 RNU4-76P-201ENST00000364509 141 ntBASIC0.38□□□□□ -2.35
SPCS3P61009 RNU1-93P-201ENST00000364704 169 ntBASIC0.38□□□□□ -2.35
SPCS3P61009 RNU6-1303P-201ENST00000364841 107 ntBASIC0.38□□□□□ -2.35
SPCS3P61009 RNU6-157P-201ENST00000383957 107 ntBASIC0.38□□□□□ -2.35
SPCS3P61009 MIR10B-201ENST00000385011 110 ntBASIC0.38□□□□□ -2.35
SPCS3P61009 RNU6-1093P-201ENST00000391194 107 ntBASIC0.38□□□□□ -2.35
SPCS3P61009 MRPL42P2-201ENST00000403169 426 ntBASIC0.38□□□□□ -2.35
SPCS3P61009 RNU2-8P-201ENST00000410727 190 ntBASIC0.38□□□□□ -2.35
SPCS3P61009 AC244023.1-201ENST00000426884 112 ntBASIC0.38□□□□□ -2.35
SPCS3P61009 MTATP6P16-201ENST00000434543 526 ntBASIC0.38□□□□□ -2.35
SPCS3P61009 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.38□□□□□ -2.35
SPCS3P61009 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC0.38□□□□□ -2.35
SPCS3P61009 AC113410.1-201ENST00000505029 247 ntBASIC0.38□□□□□ -2.35
SPCS3P61009 HMGB1P29-201ENST00000505659 499 ntBASIC0.38□□□□□ -2.35
SPCS3P61009 AC116562.3-201ENST00000506136 177 ntBASIC0.38□□□□□ -2.35
SPCS3P61009 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC0.38□□□□□ -2.35
SPCS3P61009 RNA5SP102-201ENST00000516865 106 ntBASIC0.38□□□□□ -2.35
SPCS3P61009 AC068587.5-201ENST00000528506 175 ntBASIC0.38□□□□□ -2.35
SPCS3P61009 AC007834.2-201ENST00000536310 343 ntBASIC0.38□□□□□ -2.35
SPCS3P61009 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.38□□□□□ -2.35
SPCS3P61009 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.38□□□□□ -2.35
SPCS3P61009 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.38□□□□□ -2.35
SPCS3P61009 AC091805.2-201ENST00000603848 235 ntBASIC0.38□□□□□ -2.35
SPCS3P61009 AC242498.1-201ENST00000604134 111 ntBASIC0.38□□□□□ -2.35
SPCS3P61009 AC022217.4-201ENST00000604389 163 ntBASIC0.38□□□□□ -2.35
SPCS3P61009 AC012557.2-201ENST00000605919 418 ntBASIC0.38□□□□□ -2.35
SPCS3P61009 AL121992.2-201ENST00000606262 256 ntBASIC0.38□□□□□ -2.35
SPCS3P61009 AL139418.1-201ENST00000613613 177 ntBASIC0.38□□□□□ -2.35
SPCS3P61009 AC104010.1-201ENST00000616889 150 ntBASIC0.38□□□□□ -2.35
SPCS3P61009 AC243994.1-201ENST00000618627 109 ntBASIC0.38□□□□□ -2.35
SPCS3P61009 MIR8054-201ENST00000620877 86 ntBASIC0.38□□□□□ -2.35
SPCS3P61009 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.37□□□□□ -2.35
SPCS3P61009 AC009541.1-201ENST00000438279 2662 ntBASIC0.37□□□□□ -2.35
SPCS3P61009 RNY1P10-201ENST00000363268 113 ntBASIC0.37□□□□□ -2.35
SPCS3P61009 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.37□□□□□ -2.35
SPCS3P61009 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC0.37□□□□□ -2.35
SPCS3P61009 FABP5P4-201ENST00000437203 171 ntBASIC0.37□□□□□ -2.35
SPCS3P61009 RPEP5-201ENST00000441137 268 ntBASIC0.37□□□□□ -2.35
SPCS3P61009 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.37□□□□□ -2.35
SPCS3P61009 USP9YP25-201ENST00000457708 443 ntBASIC0.37□□□□□ -2.35
SPCS3P61009 RNU7-90P-201ENST00000459216 62 ntBASIC0.37□□□□□ -2.35
SPCS3P61009 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.37□□□□□ -2.35
SPCS3P61009 RNU6-947P-201ENST00000516264 106 ntBASIC0.37□□□□□ -2.35
SPCS3P61009 RNU6-1069P-201ENST00000516612 133 ntBASIC0.37□□□□□ -2.35
SPCS3P61009 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.37□□□□□ -2.35
SPCS3P61009 AL391840.1-201ENST00000571144 367 ntBASIC0.37□□□□□ -2.35
SPCS3P61009 MIR4769-201ENST00000584126 77 ntBASIC0.37□□□□□ -2.35
SPCS3P61009 Z99497.2-201ENST00000603634 310 ntBASIC0.37□□□□□ -2.35
SPCS3P61009 AC069431.2-201ENST00000604149 1099 ntBASIC0.37□□□□□ -2.35
SPCS3P61009 AP001836.1-201ENST00000604675 523 ntBASIC0.37□□□□□ -2.35
SPCS3P61009 AC006001.4-201ENST00000622243 395 ntBASIC0.37□□□□□ -2.35
SPCS3P61009 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.37□□□□□ -2.35
SPCS3P61009 ELL2P3-201ENST00000457883 1602 ntBASIC0.37□□□□□ -2.35
SPCS3P61009 CASC19-280ENST00000642102 1351 ntBASIC0.36□□□□□ -2.35
SPCS3P61009 Y_RNA.18-201ENST00000362461 102 ntBASIC0.36□□□□□ -2.35
SPCS3P61009 RNU6-715P-201ENST00000365204 103 ntBASIC0.36□□□□□ -2.35
SPCS3P61009 RNU6-945P-201ENST00000383947 107 ntBASIC0.36□□□□□ -2.35
SPCS3P61009 MIR660-201ENST00000385235 97 ntBASIC0.36□□□□□ -2.35
SPCS3P61009 MIR549A-201ENST00000385268 96 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms