Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AL356776.1-201ENST00000406574 447 ntBASIC0.75□□□□□ -2.29
ACTBP60709 RNU4-46P-201ENST00000410818 138 ntBASIC0.75□□□□□ -2.29
ACTBP60709 RPS27P1-201ENST00000450552 247 ntBASIC0.75□□□□□ -2.29
ACTBP60709 AL163973.1-201ENST00000484753 577 ntBASIC0.75□□□□□ -2.29
ACTBP60709 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.75□□□□□ -2.29
ACTBP60709 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.75□□□□□ -2.29
ACTBP60709 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.75□□□□□ -2.29
ACTBP60709 RNU2-69P-201ENST00000516061 100 ntBASIC0.75□□□□□ -2.29
ACTBP60709 RNU6-165P-201ENST00000517170 99 ntBASIC0.75□□□□□ -2.29
ACTBP60709 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.75□□□□□ -2.29
ACTBP60709 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.75□□□□□ -2.29
ACTBP60709 MIR4709-201ENST00000577272 72 ntBASIC0.75□□□□□ -2.29
ACTBP60709 AC008250.2-201ENST00000615261 205 ntBASIC0.75□□□□□ -2.29
ACTBP60709 AC009509.4-201ENST00000619202 509 ntBASIC0.75□□□□□ -2.29
ACTBP60709 AL078595.3-201ENST00000623815 1166 ntBASIC0.75□□□□□ -2.29
ACTBP60709 U6.114-201ENST00000636407 96 ntBASIC0.75□□□□□ -2.29
ACTBP60709 Y_RNA.132-201ENST00000363421 102 ntBASIC0.74□□□□□ -2.29
ACTBP60709 SNORD114-22-201ENST00000365423 72 ntBASIC0.74□□□□□ -2.29
ACTBP60709 RNU6-108P-201ENST00000365558 107 ntBASIC0.74□□□□□ -2.29
ACTBP60709 MIR300-201ENST00000401138 83 ntBASIC0.74□□□□□ -2.29
ACTBP60709 Y_RNA.598-201ENST00000410480 95 ntBASIC0.74□□□□□ -2.29
ACTBP60709 COX6CP10-201ENST00000416832 224 ntBASIC0.74□□□□□ -2.29
ACTBP60709 AL354692.1-201ENST00000423044 315 ntBASIC0.74□□□□□ -2.29
ACTBP60709 AL133217.1-201ENST00000450980 425 ntBASIC0.74□□□□□ -2.29
ACTBP60709 ZNF114P1-201ENST00000453500 292 ntBASIC0.74□□□□□ -2.29
ACTBP60709 C1DP4-201ENST00000455429 424 ntBASIC0.74□□□□□ -2.29
ACTBP60709 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC0.74□□□□□ -2.29
ACTBP60709 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.74□□□□□ -2.29
ACTBP60709 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.74□□□□□ -2.29
ACTBP60709 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.74□□□□□ -2.29
ACTBP60709 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.74□□□□□ -2.29
ACTBP60709 MRPS36P3-201ENST00000519284 130 ntBASIC0.74□□□□□ -2.29
ACTBP60709 AL022161.1-201ENST00000604390 213 ntBASIC0.74□□□□□ -2.29
ACTBP60709 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.74□□□□□ -2.29
ACTBP60709 AL133173.2-201ENST00000614270 90 ntBASIC0.74□□□□□ -2.29
ACTBP60709 AC022306.3-201ENST00000619930 550 ntBASIC0.74□□□□□ -2.29
ACTBP60709 RNU6-545P-201ENST00000362681 104 ntBASIC0.73□□□□□ -2.29
ACTBP60709 Y_RNA.116-201ENST00000363292 103 ntBASIC0.73□□□□□ -2.29
ACTBP60709 RNU6-827P-201ENST00000365553 106 ntBASIC0.73□□□□□ -2.29
ACTBP60709 RNU6-418P-201ENST00000384035 107 ntBASIC0.73□□□□□ -2.29
ACTBP60709 Y_RNA.504-201ENST00000384481 104 ntBASIC0.73□□□□□ -2.29
ACTBP60709 MIR19B1-201ENST00000384829 87 ntBASIC0.73□□□□□ -2.29
ACTBP60709 MIR518E-201ENST00000385252 88 ntBASIC0.73□□□□□ -2.29
ACTBP60709 SNORA16.2-201ENST00000390991 127 ntBASIC0.73□□□□□ -2.29
ACTBP60709 RPL21P1-201ENST00000399532 476 ntBASIC0.73□□□□□ -2.29
ACTBP60709 MIR208B-201ENST00000401172 77 ntBASIC0.73□□□□□ -2.29
ACTBP60709 MIR1283-1-201ENST00000408494 87 ntBASIC0.73□□□□□ -2.29
ACTBP60709 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC0.73□□□□□ -2.29
ACTBP60709 MTND3P17-201ENST00000416968 344 ntBASIC0.73□□□□□ -2.29
ACTBP60709 AC012306.1-201ENST00000423267 114 ntBASIC0.73□□□□□ -2.29
ACTBP60709 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.73□□□□□ -2.29
ACTBP60709 GPR143P-201ENST00000434155 205 ntBASIC0.73□□□□□ -2.29
ACTBP60709 RPS4XP11-201ENST00000446897 772 ntBASIC0.73□□□□□ -2.29
ACTBP60709 RPS26P45-201ENST00000471748 340 ntBASIC0.73□□□□□ -2.29
ACTBP60709 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.73□□□□□ -2.29
ACTBP60709 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.73□□□□□ -2.29
ACTBP60709 ARL2BPP4-201ENST00000506854 471 ntBASIC0.73□□□□□ -2.29
ACTBP60709 AC079140.5-201ENST00000507882 310 ntBASIC0.73□□□□□ -2.29
ACTBP60709 RNU6-113P-201ENST00000516653 101 ntBASIC0.73□□□□□ -2.29
ACTBP60709 AP003461.1-201ENST00000528866 78 ntBASIC0.73□□□□□ -2.29
ACTBP60709 ELOCP32-201ENST00000548625 324 ntBASIC0.73□□□□□ -2.29
ACTBP60709 AC103996.1-201ENST00000555468 102 ntBASIC0.73□□□□□ -2.29
ACTBP60709 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.73□□□□□ -2.29
ACTBP60709 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.73□□□□□ -2.29
ACTBP60709 AC109446.2-201ENST00000567872 497 ntBASIC0.73□□□□□ -2.29
ACTBP60709 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.73□□□□□ -2.29
ACTBP60709 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.73□□□□□ -2.29
ACTBP60709 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.73□□□□□ -2.29
ACTBP60709 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.73□□□□□ -2.29
ACTBP60709 MIR6734-201ENST00000621166 68 ntBASIC0.73□□□□□ -2.29
ACTBP60709 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.73□□□□□ -2.29
ACTBP60709 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.73□□□□□ -2.29
ACTBP60709 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
ACTBP60709 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
ACTBP60709 snoU2-30.2-201ENST00000362805 70 ntBASIC0.72□□□□□ -2.29
ACTBP60709 Y_RNA.118-201ENST00000363300 101 ntBASIC0.72□□□□□ -2.29
ACTBP60709 SNORA33-201ENST00000363664 130 ntBASIC0.72□□□□□ -2.29
ACTBP60709 RNU6-1029P-201ENST00000384109 107 ntBASIC0.72□□□□□ -2.29
ACTBP60709 RNU6-434P-201ENST00000384376 107 ntBASIC0.72□□□□□ -2.29
ACTBP60709 RNU6-393P-201ENST00000384475 107 ntBASIC0.72□□□□□ -2.29
ACTBP60709 RNU6-1127P-201ENST00000384580 107 ntBASIC0.72□□□□□ -2.29
ACTBP60709 MIR515-2-201ENST00000384883 83 ntBASIC0.72□□□□□ -2.29
ACTBP60709 MIR515-1-201ENST00000384884 83 ntBASIC0.72□□□□□ -2.29
ACTBP60709 MIR532-201ENST00000385025 91 ntBASIC0.72□□□□□ -2.29
ACTBP60709 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.72□□□□□ -2.29
ACTBP60709 UBE2D3P4-201ENST00000441973 436 ntBASIC0.72□□□□□ -2.29
ACTBP60709 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.72□□□□□ -2.29
ACTBP60709 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.72□□□□□ -2.29
ACTBP60709 RNU7-182P-201ENST00000459009 62 ntBASIC0.72□□□□□ -2.29
ACTBP60709 RPL39P38-201ENST00000467018 153 ntBASIC0.72□□□□□ -2.29
ACTBP60709 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.72□□□□□ -2.29
ACTBP60709 AC091435.1-201ENST00000505442 584 ntBASIC0.72□□□□□ -2.29
ACTBP60709 AK3P2-201ENST00000507976 429 ntBASIC0.72□□□□□ -2.29
ACTBP60709 RNU6-351P-201ENST00000516097 100 ntBASIC0.72□□□□□ -2.29
ACTBP60709 RNA5SP220-201ENST00000516298 104 ntBASIC0.72□□□□□ -2.29
ACTBP60709 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.72□□□□□ -2.29
ACTBP60709 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.72□□□□□ -2.29
ACTBP60709 AC002044.1-201ENST00000606707 158 ntBASIC0.72□□□□□ -2.29
ACTBP60709 AC004223.4-201ENST00000612426 332 ntBASIC0.72□□□□□ -2.29
ACTBP60709 uc_338.11-201ENST00000619132 160 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 166.4 ms