Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 SNORA63D-201ENST00000364359 132 ntBASIC1.07□□□□□ -2.24
CMC4P56277 RNU6-1019P-201ENST00000364424 107 ntBASIC1.07□□□□□ -2.24
CMC4P56277 RNU6-1026P-201ENST00000384465 108 ntBASIC1.07□□□□□ -2.24
CMC4P56277 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
CMC4P56277 AL117342.1-201ENST00000404861 406 ntBASIC1.07□□□□□ -2.24
CMC4P56277 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.07□□□□□ -2.24
CMC4P56277 AC245047.4-201ENST00000433189 144 ntBASIC1.07□□□□□ -2.24
CMC4P56277 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.07□□□□□ -2.24
CMC4P56277 JTBP1-201ENST00000441314 247 ntBASIC1.07□□□□□ -2.24
CMC4P56277 AL359672.1-201ENST00000442302 409 ntBASIC1.07□□□□□ -2.24
CMC4P56277 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
CMC4P56277 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.07□□□□□ -2.24
CMC4P56277 snoU13.9-201ENST00000458927 103 ntBASIC1.07□□□□□ -2.24
CMC4P56277 Y_RNA.654-201ENST00000497848 106 ntBASIC1.07□□□□□ -2.24
CMC4P56277 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.07□□□□□ -2.24
CMC4P56277 RNA5SP481-201ENST00000516814 122 ntBASIC1.07□□□□□ -2.24
CMC4P56277 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.07□□□□□ -2.24
CMC4P56277 RNU6-323P-201ENST00000521915 107 ntBASIC1.07□□□□□ -2.24
CMC4P56277 AL161670.1-201ENST00000554348 137 ntBASIC1.07□□□□□ -2.24
CMC4P56277 AC100830.2-201ENST00000581636 240 ntBASIC1.07□□□□□ -2.24
CMC4P56277 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.07□□□□□ -2.24
CMC4P56277 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.07□□□□□ -2.24
CMC4P56277 AC245008.1-201ENST00000608123 476 ntBASIC1.07□□□□□ -2.24
CMC4P56277 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.07□□□□□ -2.24
CMC4P56277 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.07□□□□□ -2.24
CMC4P56277 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.07□□□□□ -2.24
CMC4P56277 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.07□□□□□ -2.24
CMC4P56277 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.06□□□□□ -2.24
CMC4P56277 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.06□□□□□ -2.24
CMC4P56277 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
CMC4P56277 AC121333.1-201ENST00000567488 2709 ntBASIC1.06□□□□□ -2.24
CMC4P56277 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
CMC4P56277 MIR302D-201ENST00000362275 68 ntBASIC1.06□□□□□ -2.24
CMC4P56277 Y_RNA.132-201ENST00000363421 102 ntBASIC1.06□□□□□ -2.24
CMC4P56277 SNORA18.2-201ENST00000383865 132 ntBASIC1.06□□□□□ -2.24
CMC4P56277 RNU6-1286P-201ENST00000383871 107 ntBASIC1.06□□□□□ -2.24
CMC4P56277 RNU6-203P-201ENST00000384038 104 ntBASIC1.06□□□□□ -2.24
CMC4P56277 SNORA29-201ENST00000384183 140 ntBASIC1.06□□□□□ -2.24
CMC4P56277 MIR764-201ENST00000390811 85 ntBASIC1.06□□□□□ -2.24
CMC4P56277 RNU6-1093P-201ENST00000391194 107 ntBASIC1.06□□□□□ -2.24
CMC4P56277 RPL21P111-201ENST00000418453 477 ntBASIC1.06□□□□□ -2.24
CMC4P56277 AC069257.2-201ENST00000441819 155 ntBASIC1.06□□□□□ -2.24
CMC4P56277 RN7SKP210-201ENST00000459176 261 ntBASIC1.06□□□□□ -2.24
CMC4P56277 AC007215.1-201ENST00000464893 276 ntBASIC1.06□□□□□ -2.24
CMC4P56277 AC005908.1-201ENST00000468701 347 ntBASIC1.06□□□□□ -2.24
CMC4P56277 HMGN1P13-201ENST00000505795 138 ntBASIC1.06□□□□□ -2.24
CMC4P56277 AC096745.1-201ENST00000509945 370 ntBASIC1.06□□□□□ -2.24
CMC4P56277 RNA5SP458-201ENST00000516188 119 ntBASIC1.06□□□□□ -2.24
CMC4P56277 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.06□□□□□ -2.24
CMC4P56277 DEFB131C-201ENST00000528817 165 ntBASIC1.06□□□□□ -2.24
CMC4P56277 SUB1P3-201ENST00000564581 315 ntBASIC1.06□□□□□ -2.24
CMC4P56277 AC015720.1-201ENST00000565251 277 ntBASIC1.06□□□□□ -2.24
CMC4P56277 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.06□□□□□ -2.24
CMC4P56277 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.06□□□□□ -2.24
CMC4P56277 AL158211.1-201ENST00000566763 763 ntBASIC1.06□□□□□ -2.24
CMC4P56277 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.06□□□□□ -2.24
CMC4P56277 CPDP1-201ENST00000579660 283 ntBASIC1.06□□□□□ -2.24
CMC4P56277 FGF7P1-201ENST00000582820 288 ntBASIC1.06□□□□□ -2.24
CMC4P56277 MIR5692C1-201ENST00000585309 91 ntBASIC1.06□□□□□ -2.24
CMC4P56277 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.06□□□□□ -2.24
CMC4P56277 AC064836.2-201ENST00000609491 462 ntBASIC1.06□□□□□ -2.24
CMC4P56277 AC083806.3-201ENST00000614016 455 ntBASIC1.06□□□□□ -2.24
CMC4P56277 TCL6_2.1-201ENST00000615162 119 ntBASIC1.06□□□□□ -2.24
CMC4P56277 AC005562.2-201ENST00000618264 111 ntBASIC1.06□□□□□ -2.24
CMC4P56277 AC139792.3-201ENST00000623525 224 ntBASIC1.06□□□□□ -2.24
CMC4P56277 AC090582.1-201ENST00000636321 199 ntBASIC1.06□□□□□ -2.24
CMC4P56277 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.06□□□□□ -2.24
CMC4P56277 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.06□□□□□ -2.24
CMC4P56277 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.05□□□□□ -2.24
CMC4P56277 MIR378A-201ENST00000362177 66 ntBASIC1.05□□□□□ -2.24
CMC4P56277 Y_RNA.67-201ENST00000362870 100 ntBASIC1.05□□□□□ -2.24
CMC4P56277 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.05□□□□□ -2.24
CMC4P56277 U8.10-201ENST00000384260 133 ntBASIC1.05□□□□□ -2.24
CMC4P56277 RNU6-997P-201ENST00000384725 107 ntBASIC1.05□□□□□ -2.24
CMC4P56277 MIR514A2-201ENST00000385131 88 ntBASIC1.05□□□□□ -2.24
CMC4P56277 MIR514A3-201ENST00000385132 88 ntBASIC1.05□□□□□ -2.24
CMC4P56277 DEFB108C-201ENST00000400154 252 ntBASIC1.05□□□□□ -2.24
CMC4P56277 MIR1283-1-201ENST00000408494 87 ntBASIC1.05□□□□□ -2.24
CMC4P56277 MIR1267-201ENST00000408723 78 ntBASIC1.05□□□□□ -2.24
CMC4P56277 RPS20P15-201ENST00000412792 311 ntBASIC1.05□□□□□ -2.24
CMC4P56277 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.05□□□□□ -2.24
CMC4P56277 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.05□□□□□ -2.24
CMC4P56277 AL161935.2-201ENST00000414627 60 ntBASIC1.05□□□□□ -2.24
CMC4P56277 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.05□□□□□ -2.24
CMC4P56277 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.05□□□□□ -2.24
CMC4P56277 MTCO1P20-201ENST00000425366 358 ntBASIC1.05□□□□□ -2.24
CMC4P56277 CST2P1-201ENST00000425770 87 ntBASIC1.05□□□□□ -2.24
CMC4P56277 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC1.05□□□□□ -2.24
CMC4P56277 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.05□□□□□ -2.24
CMC4P56277 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.05□□□□□ -2.24
CMC4P56277 TPT1P7-201ENST00000458300 517 ntBASIC1.05□□□□□ -2.24
CMC4P56277 RNU6-1208P-201ENST00000459588 107 ntBASIC1.05□□□□□ -2.24
CMC4P56277 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.05□□□□□ -2.24
CMC4P56277 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.05□□□□□ -2.24
CMC4P56277 RNA5SP445-201ENST00000515889 115 ntBASIC1.05□□□□□ -2.24
CMC4P56277 RNU6-835P-201ENST00000516974 104 ntBASIC1.05□□□□□ -2.24
CMC4P56277 RNU6-902P-201ENST00000517212 91 ntBASIC1.05□□□□□ -2.24
CMC4P56277 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.05□□□□□ -2.24
CMC4P56277 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.05□□□□□ -2.24
CMC4P56277 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 170.6 ms