Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC0.2□□□□□ -2.38
FOXA3P55318 AL031313.1-201ENST00000448435 256 ntBASIC0.2□□□□□ -2.38
FOXA3P55318 TAF9P2-201ENST00000454958 515 ntBASIC0.2□□□□□ -2.38
FOXA3P55318 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC0.2□□□□□ -2.38
FOXA3P55318 SRRM1P2-201ENST00000464531 1192 ntBASIC0.2□□□□□ -2.38
FOXA3P55318 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC0.2□□□□□ -2.38
FOXA3P55318 HMGB1P29-201ENST00000505659 499 ntBASIC0.2□□□□□ -2.38
FOXA3P55318 AC091874.1-201ENST00000511402 339 ntBASIC0.2□□□□□ -2.38
FOXA3P55318 AC025465.4-201ENST00000513422 638 ntBASIC0.2□□□□□ -2.38
FOXA3P55318 RN7SKP12-201ENST00000516275 143 ntBASIC0.2□□□□□ -2.38
FOXA3P55318 AL137100.2-201ENST00000555786 315 ntBASIC0.2□□□□□ -2.38
FOXA3P55318 MIR151B-201ENST00000584249 96 ntBASIC0.2□□□□□ -2.38
FOXA3P55318 Z98751.3-201ENST00000604447 521 ntBASIC0.2□□□□□ -2.38
FOXA3P55318 AC064872.1-201ENST00000604823 1072 ntBASIC0.2□□□□□ -2.38
FOXA3P55318 AL592221.1-201ENST00000605266 382 ntBASIC0.2□□□□□ -2.38
FOXA3P55318 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.2□□□□□ -2.38
FOXA3P55318 AC006001.4-201ENST00000622243 395 ntBASIC0.2□□□□□ -2.38
FOXA3P55318 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.2□□□□□ -2.38
FOXA3P55318 AL450472.1-202ENST00000637286 180 ntBASIC0.2□□□□□ -2.38
FOXA3P55318 AL442644.1-201ENST00000454390 3105 ntBASIC0.19□□□□□ -2.38
FOXA3P55318 Y_RNA.4-201ENST00000362333 112 ntBASIC0.19□□□□□ -2.38
FOXA3P55318 Y_RNA.287-201ENST00000364853 94 ntBASIC0.19□□□□□ -2.38
FOXA3P55318 SNORA25.9-201ENST00000365087 128 ntBASIC0.19□□□□□ -2.38
FOXA3P55318 RNU6-61P-201ENST00000365528 109 ntBASIC0.19□□□□□ -2.38
FOXA3P55318 RNU6-116P-201ENST00000384042 109 ntBASIC0.19□□□□□ -2.38
FOXA3P55318 MTCYBP36-201ENST00000404146 440 ntBASIC0.19□□□□□ -2.38
FOXA3P55318 MIR1283-1-201ENST00000408494 87 ntBASIC0.19□□□□□ -2.38
FOXA3P55318 SNORD99-201ENST00000408612 74 ntBASIC0.19□□□□□ -2.38
FOXA3P55318 RNU6-757P-201ENST00000410334 100 ntBASIC0.19□□□□□ -2.38
FOXA3P55318 AC119618.1-201ENST00000434191 222 ntBASIC0.19□□□□□ -2.38
FOXA3P55318 AC002486.1-201ENST00000435098 391 ntBASIC0.19□□□□□ -2.38
FOXA3P55318 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.19□□□□□ -2.38
FOXA3P55318 AC233266.1-201ENST00000454518 96 ntBASIC0.19□□□□□ -2.38
FOXA3P55318 AC104982.1-201ENST00000478775 574 ntBASIC0.19□□□□□ -2.38
FOXA3P55318 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.19□□□□□ -2.38
FOXA3P55318 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.19□□□□□ -2.38
FOXA3P55318 AC117522.1-201ENST00000509821 380 ntBASIC0.19□□□□□ -2.38
FOXA3P55318 AC109479.2-201ENST00000517842 174 ntBASIC0.19□□□□□ -2.38
FOXA3P55318 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.19□□□□□ -2.38
FOXA3P55318 AC010376.1-201ENST00000522101 334 ntBASIC0.19□□□□□ -2.38
FOXA3P55318 ZNF519P3-201ENST00000557158 1032 ntBASIC0.19□□□□□ -2.38
FOXA3P55318 MIR4778-201ENST00000577635 80 ntBASIC0.19□□□□□ -2.38
FOXA3P55318 MIR4753-201ENST00000585119 83 ntBASIC0.19□□□□□ -2.38
FOXA3P55318 BNIP3P40-201ENST00000596017 556 ntBASIC0.19□□□□□ -2.38
FOXA3P55318 RPL17P51-201ENST00000605218 238 ntBASIC0.19□□□□□ -2.38
FOXA3P55318 Z99289.3-201ENST00000605586 594 ntBASIC0.19□□□□□ -2.38
FOXA3P55318 AC009994.1-201ENST00000606889 253 ntBASIC0.19□□□□□ -2.38
FOXA3P55318 AC104458.1-201ENST00000608243 463 ntBASIC0.19□□□□□ -2.38
FOXA3P55318 AC242852.1-201ENST00000612151 96 ntBASIC0.19□□□□□ -2.38
FOXA3P55318 AC243829.3-201ENST00000622177 108 ntBASIC0.19□□□□□ -2.38
FOXA3P55318 AC244015.1-201ENST00000622301 99 ntBASIC0.19□□□□□ -2.38
FOXA3P55318 AC068787.1-201ENST00000623908 691 ntBASIC0.19□□□□□ -2.38
FOXA3P55318 AC019226.2-201ENST00000625973 424 ntBASIC0.19□□□□□ -2.38
FOXA3P55318 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.19□□□□□ -2.38
FOXA3P55318 CASC19-280ENST00000642102 1351 ntBASIC0.19□□□□□ -2.38
FOXA3P55318 AC092268.1-201ENST00000342691 405 ntBASIC0.18□□□□□ -2.38
FOXA3P55318 RNU4-76P-201ENST00000364509 141 ntBASIC0.18□□□□□ -2.38
FOXA3P55318 RNU6-1303P-201ENST00000364841 107 ntBASIC0.18□□□□□ -2.38
FOXA3P55318 SNORD41-201ENST00000386967 70 ntBASIC0.18□□□□□ -2.38
FOXA3P55318 SNORA75.2-201ENST00000391138 150 ntBASIC0.18□□□□□ -2.38
FOXA3P55318 RNU6-1093P-201ENST00000391194 107 ntBASIC0.18□□□□□ -2.38
FOXA3P55318 SNORA75.3-201ENST00000391231 150 ntBASIC0.18□□□□□ -2.38
FOXA3P55318 AC090960.1-201ENST00000421072 306 ntBASIC0.18□□□□□ -2.38
FOXA3P55318 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.18□□□□□ -2.38
FOXA3P55318 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC0.18□□□□□ -2.38
FOXA3P55318 MTCO2P12-201ENST00000427426 682 ntBASIC0.18□□□□□ -2.38
FOXA3P55318 AL133396.1-201ENST00000432048 687 ntBASIC0.18□□□□□ -2.38
FOXA3P55318 RNU7-90P-201ENST00000459216 62 ntBASIC0.18□□□□□ -2.38
FOXA3P55318 RNU7-21P-201ENST00000459430 62 ntBASIC0.18□□□□□ -2.38
FOXA3P55318 AC016632.1-201ENST00000503994 196 ntBASIC0.18□□□□□ -2.38
FOXA3P55318 AC010587.1-201ENST00000505809 469 ntBASIC0.18□□□□□ -2.38
FOXA3P55318 RNU6-948P-201ENST00000516374 107 ntBASIC0.18□□□□□ -2.38
FOXA3P55318 DEFB131C-201ENST00000528817 165 ntBASIC0.18□□□□□ -2.38
FOXA3P55318 AP003181.2-201ENST00000528941 181 ntBASIC0.18□□□□□ -2.38
FOXA3P55318 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.18□□□□□ -2.38
FOXA3P55318 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.18□□□□□ -2.38
FOXA3P55318 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.18□□□□□ -2.38
FOXA3P55318 MIR5093-201ENST00000583199 100 ntBASIC0.18□□□□□ -2.38
FOXA3P55318 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC0.18□□□□□ -2.38
FOXA3P55318 AL390123.1-201ENST00000603216 237 ntBASIC0.18□□□□□ -2.38
FOXA3P55318 Z99497.2-201ENST00000603634 310 ntBASIC0.18□□□□□ -2.38
FOXA3P55318 AC022217.4-201ENST00000604389 163 ntBASIC0.18□□□□□ -2.38
FOXA3P55318 AC097065.2-201ENST00000608159 533 ntBASIC0.18□□□□□ -2.38
FOXA3P55318 AC008250.2-201ENST00000615261 205 ntBASIC0.18□□□□□ -2.38
FOXA3P55318 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.18□□□□□ -2.38
FOXA3P55318 MIR6513-201ENST00000621188 64 ntBASIC0.18□□□□□ -2.38
FOXA3P55318 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.18□□□□□ -2.38
FOXA3P55318 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.18□□□□□ -2.38
FOXA3P55318 Y_RNA.97-201ENST00000363094 102 ntBASIC0.17□□□□□ -2.38
FOXA3P55318 Y_RNA.164-201ENST00000363709 102 ntBASIC0.17□□□□□ -2.38
FOXA3P55318 RNU4-1-201ENST00000363925 141 ntBASIC0.17□□□□□ -2.38
FOXA3P55318 RNU6-348P-201ENST00000384386 107 ntBASIC0.17□□□□□ -2.38
FOXA3P55318 RNU6-163P-201ENST00000384396 106 ntBASIC0.17□□□□□ -2.38
FOXA3P55318 RNU6-45P-201ENST00000384471 107 ntBASIC0.17□□□□□ -2.38
FOXA3P55318 MIR558-201ENST00000384920 94 ntBASIC0.17□□□□□ -2.38
FOXA3P55318 MIR549A-201ENST00000385268 96 ntBASIC0.17□□□□□ -2.38
FOXA3P55318 SNORA16.2-201ENST00000390991 127 ntBASIC0.17□□□□□ -2.38
FOXA3P55318 SNORA26.3-201ENST00000391119 136 ntBASIC0.17□□□□□ -2.38
FOXA3P55318 MIR300-201ENST00000401138 83 ntBASIC0.17□□□□□ -2.38
FOXA3P55318 MIR1253-201ENST00000408273 105 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms