Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 AC004584.2-201ENST00000570407 410 ntBASIC2.63□□□□□ -1.99
PMS2P54278 AC090897.2-201ENST00000581715 130 ntBASIC2.63□□□□□ -1.99
PMS2P54278 AC008737.2-201ENST00000599446 118 ntBASIC2.63□□□□□ -1.99
PMS2P54278 MIR6715A-201ENST00000615929 79 ntBASIC2.63□□□□□ -1.99
PMS2P54278 AC087588.2-201ENST00000617667 426 ntBASIC2.63□□□□□ -1.99
PMS2P54278 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
PMS2P54278 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
PMS2P54278 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
PMS2P54278 Y_RNA.39-201ENST00000362620 98 ntBASIC2.62□□□□□ -1.99
PMS2P54278 RNU6-1285P-201ENST00000363480 105 ntBASIC2.62□□□□□ -1.99
PMS2P54278 RNU4-42P-201ENST00000364738 142 ntBASIC2.62□□□□□ -1.99
PMS2P54278 RNU6-1286P-201ENST00000383871 107 ntBASIC2.62□□□□□ -1.99
PMS2P54278 MIR144-201ENST00000384886 86 ntBASIC2.62□□□□□ -1.99
PMS2P54278 MIR625-201ENST00000385047 85 ntBASIC2.62□□□□□ -1.99
PMS2P54278 RNU2-52P-201ENST00000410680 190 ntBASIC2.62□□□□□ -1.99
PMS2P54278 AC113618.1-201ENST00000416747 285 ntBASIC2.62□□□□□ -1.99
PMS2P54278 AC007098.1-201ENST00000420122 367 ntBASIC2.62□□□□□ -1.99
PMS2P54278 AL358176.2-201ENST00000425769 204 ntBASIC2.62□□□□□ -1.99
PMS2P54278 AC105758.1-201ENST00000506038 399 ntBASIC2.62□□□□□ -1.99
PMS2P54278 SNORA25.11-201ENST00000515935 105 ntBASIC2.62□□□□□ -1.99
PMS2P54278 RNU6-911P-201ENST00000516523 104 ntBASIC2.62□□□□□ -1.99
PMS2P54278 AC027176.1-201ENST00000560204 514 ntBASIC2.62□□□□□ -1.99
PMS2P54278 MIR5571-201ENST00000577998 113 ntBASIC2.62□□□□□ -1.99
PMS2P54278 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.62□□□□□ -1.99
PMS2P54278 AC104695.3-201ENST00000604052 296 ntBASIC2.62□□□□□ -1.99
PMS2P54278 AL138825.1-201ENST00000618587 192 ntBASIC2.62□□□□□ -1.99
PMS2P54278 AL159153.1-201ENST00000619688 317 ntBASIC2.62□□□□□ -1.99
PMS2P54278 SNORA43.4-201ENST00000629559 138 ntBASIC2.62□□□□□ -1.99
PMS2P54278 MIR4272-201ENST00000635924 64 ntBASIC2.62□□□□□ -1.99
PMS2P54278 Z82209.1-201ENST00000422141 2135 ntBASIC2.62□□□□□ -1.99
PMS2P54278 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
PMS2P54278 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
PMS2P54278 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
PMS2P54278 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
PMS2P54278 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
PMS2P54278 Y_RNA.133-201ENST00000363428 110 ntBASIC2.61□□□□□ -1.99
PMS2P54278 RNU4-9P-201ENST00000364951 139 ntBASIC2.61□□□□□ -1.99
PMS2P54278 MIR544A-201ENST00000384855 91 ntBASIC2.61□□□□□ -1.99
PMS2P54278 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
PMS2P54278 RNU6-220P-201ENST00000390919 107 ntBASIC2.61□□□□□ -1.99
PMS2P54278 SNORA12.2-201ENST00000391040 156 ntBASIC2.61□□□□□ -1.99
PMS2P54278 RNU6-700P-201ENST00000391043 107 ntBASIC2.61□□□□□ -1.99
PMS2P54278 AL356057.3-201ENST00000402607 340 ntBASIC2.61□□□□□ -1.99
PMS2P54278 RNA5SP494-201ENST00000410653 129 ntBASIC2.61□□□□□ -1.99
PMS2P54278 CYCSP48-201ENST00000417124 323 ntBASIC2.61□□□□□ -1.99
PMS2P54278 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.61□□□□□ -1.99
PMS2P54278 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.61□□□□□ -1.99
PMS2P54278 AC104389.3-201ENST00000445629 235 ntBASIC2.61□□□□□ -1.99
PMS2P54278 CHEK2P4-201ENST00000450340 246 ntBASIC2.61□□□□□ -1.99
PMS2P54278 AC104564.1-201ENST00000493028 407 ntBASIC2.61□□□□□ -1.99
PMS2P54278 AC093852.1-201ENST00000503587 266 ntBASIC2.61□□□□□ -1.99
PMS2P54278 Y_RNA.721-201ENST00000517207 102 ntBASIC2.61□□□□□ -1.99
PMS2P54278 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.61□□□□□ -1.99
PMS2P54278 AC144568.1-201ENST00000520139 137 ntBASIC2.61□□□□□ -1.99
PMS2P54278 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.61□□□□□ -1.99
PMS2P54278 MRPS36P4-201ENST00000534436 298 ntBASIC2.61□□□□□ -1.99
PMS2P54278 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.61□□□□□ -1.99
PMS2P54278 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.61□□□□□ -1.99
PMS2P54278 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.61□□□□□ -1.99
PMS2P54278 AC073410.2-201ENST00000603240 332 ntBASIC2.61□□□□□ -1.99
PMS2P54278 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.61□□□□□ -1.99
PMS2P54278 AC016727.2-201ENST00000603988 621 ntBASIC2.61□□□□□ -1.99
PMS2P54278 AC007792.1-201ENST00000623023 402 ntBASIC2.61□□□□□ -1.99
PMS2P54278 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.61□□□□□ -1.99
PMS2P54278 SCARNA4-201ENST00000629045 128 ntBASIC2.61□□□□□ -1.99
PMS2P54278 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.61□□□□□ -1.99
PMS2P54278 AC002543.1-201ENST00000299783 1954 ntBASIC2.61□□□□□ -1.99
PMS2P54278 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
PMS2P54278 AP000560.1-201ENST00000624150 1937 ntBASIC2.6□□□□□ -1.99
PMS2P54278 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
PMS2P54278 RNU5B-2P-201ENST00000363036 113 ntBASIC2.6□□□□□ -1.99
PMS2P54278 SNORD115-32-201ENST00000364079 82 ntBASIC2.6□□□□□ -1.99
PMS2P54278 Y_RNA.314-201ENST00000365114 102 ntBASIC2.6□□□□□ -1.99
PMS2P54278 RNU6-142P-201ENST00000384019 107 ntBASIC2.6□□□□□ -1.99
PMS2P54278 RNU1-57P-201ENST00000384491 166 ntBASIC2.6□□□□□ -1.99
PMS2P54278 SNORA26.3-201ENST00000391119 136 ntBASIC2.6□□□□□ -1.99
PMS2P54278 AL358453.1-201ENST00000422522 250 ntBASIC2.6□□□□□ -1.99
PMS2P54278 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.6□□□□□ -1.99
PMS2P54278 AL353752.1-201ENST00000454946 260 ntBASIC2.6□□□□□ -1.99
PMS2P54278 RPL30P1-201ENST00000488676 339 ntBASIC2.6□□□□□ -1.99
PMS2P54278 RPL23AP75-201ENST00000491601 451 ntBASIC2.6□□□□□ -1.99
PMS2P54278 AC091874.1-201ENST00000511402 339 ntBASIC2.6□□□□□ -1.99
PMS2P54278 RNU6-764P-201ENST00000516396 105 ntBASIC2.6□□□□□ -1.99
PMS2P54278 AC091544.4-201ENST00000555268 342 ntBASIC2.6□□□□□ -1.99
PMS2P54278 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.6□□□□□ -1.99
PMS2P54278 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.6□□□□□ -1.99
PMS2P54278 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.6□□□□□ -1.99
PMS2P54278 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.6□□□□□ -1.99
PMS2P54278 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.6□□□□□ -1.99
PMS2P54278 AL162373.1-201ENST00000620433 407 ntBASIC2.6□□□□□ -1.99
PMS2P54278 AC243829.7-201ENST00000633081 225 ntBASIC2.6□□□□□ -1.99
PMS2P54278 AL450472.1-202ENST00000637286 180 ntBASIC2.6□□□□□ -1.99
PMS2P54278 AC233981.2-201ENST00000611524 1614 ntBASIC2.6□□□□□ -1.99
PMS2P54278 AC091812.1-201ENST00000432235 1948 ntBASIC2.6□□□□□ -1.99
PMS2P54278 MTND5P16-201ENST00000460269 1703 ntBASIC2.59□□□□□ -1.99
PMS2P54278 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.59□□□□□ -1.99
PMS2P54278 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.59□□□□□ -1.99
PMS2P54278 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.59□□□□□ -1.99
PMS2P54278 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.59□□□□□ -1.99
PMS2P54278 Y_RNA.455-201ENST00000384230 98 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 167.6 ms