Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 RNU4-15P-201ENST00000362613 141 ntBASIC1.74□□□□□ -2.13
EFNA3P52797 RNU6-227P-201ENST00000362865 103 ntBASIC1.74□□□□□ -2.13
EFNA3P52797 Y_RNA.135-201ENST00000363439 95 ntBASIC1.74□□□□□ -2.13
EFNA3P52797 RNU6-1317P-201ENST00000364582 104 ntBASIC1.74□□□□□ -2.13
EFNA3P52797 RNU4-56P-201ENST00000364700 142 ntBASIC1.74□□□□□ -2.13
EFNA3P52797 SNORD32A-201ENST00000364805 84 ntBASIC1.74□□□□□ -2.13
EFNA3P52797 RNU6-1283P-201ENST00000365314 105 ntBASIC1.74□□□□□ -2.13
EFNA3P52797 RNU6-95P-201ENST00000384697 107 ntBASIC1.74□□□□□ -2.13
EFNA3P52797 MIR521-1-201ENST00000384902 87 ntBASIC1.74□□□□□ -2.13
EFNA3P52797 HMGN2P39-201ENST00000398005 273 ntBASIC1.74□□□□□ -2.13
EFNA3P52797 EIF1AXP1-201ENST00000419267 435 ntBASIC1.74□□□□□ -2.13
EFNA3P52797 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.74□□□□□ -2.13
EFNA3P52797 AC098614.3-201ENST00000438957 440 ntBASIC1.74□□□□□ -2.13
EFNA3P52797 AC092473.1-201ENST00000441098 221 ntBASIC1.74□□□□□ -2.13
EFNA3P52797 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.74□□□□□ -2.13
EFNA3P52797 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.74□□□□□ -2.13
EFNA3P52797 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.74□□□□□ -2.13
EFNA3P52797 PCMTD1P1-201ENST00000455560 355 ntBASIC1.74□□□□□ -2.13
EFNA3P52797 PRELID3BP1-201ENST00000457142 540 ntBASIC1.74□□□□□ -2.13
EFNA3P52797 PMCHL2-203ENST00000457791 237 ntBASIC1.74□□□□□ -2.13
EFNA3P52797 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.74□□□□□ -2.13
EFNA3P52797 RNU6-991P-201ENST00000516168 107 ntBASIC1.74□□□□□ -2.13
EFNA3P52797 RNA5SP454-201ENST00000517231 127 ntBASIC1.74□□□□□ -2.13
EFNA3P52797 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.74□□□□□ -2.13
EFNA3P52797 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.74□□□□□ -2.13
EFNA3P52797 AC022616.8-201ENST00000533569 253 ntBASIC1.74□□□□□ -2.13
EFNA3P52797 NDUFA5P6-201ENST00000542110 379 ntBASIC1.74□□□□□ -2.13
EFNA3P52797 AC026271.5-201ENST00000577873 130 ntBASIC1.74□□□□□ -2.13
EFNA3P52797 MIR4742-201ENST00000581069 85 ntBASIC1.74□□□□□ -2.13
EFNA3P52797 AC007229.1-201ENST00000590455 412 ntBASIC1.74□□□□□ -2.13
EFNA3P52797 AC078899.2-201ENST00000595282 212 ntBASIC1.74□□□□□ -2.13
EFNA3P52797 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.74□□□□□ -2.13
EFNA3P52797 DUXAP9-208ENST00000622815 614 ntBASIC1.74□□□□□ -2.13
EFNA3P52797 MIR1248-201ENST00000629190 106 ntBASIC1.74□□□□□ -2.13
EFNA3P52797 AC009541.1-201ENST00000438279 2662 ntBASIC1.73□□□□□ -2.13
EFNA3P52797 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
EFNA3P52797 Y_RNA.140-201ENST00000363474 103 ntBASIC1.73□□□□□ -2.13
EFNA3P52797 Y_RNA.279-201ENST00000364763 95 ntBASIC1.73□□□□□ -2.13
EFNA3P52797 RNU6-142P-201ENST00000384019 107 ntBASIC1.73□□□□□ -2.13
EFNA3P52797 SNORA36A-201ENST00000384221 132 ntBASIC1.73□□□□□ -2.13
EFNA3P52797 Y_RNA.504-201ENST00000384481 104 ntBASIC1.73□□□□□ -2.13
EFNA3P52797 MIR1262-201ENST00000408276 93 ntBASIC1.73□□□□□ -2.13
EFNA3P52797 AC138393.2-201ENST00000414742 246 ntBASIC1.73□□□□□ -2.13
EFNA3P52797 AL590632.1-201ENST00000424289 371 ntBASIC1.73□□□□□ -2.13
EFNA3P52797 AC078809.1-201ENST00000427601 140 ntBASIC1.73□□□□□ -2.13
EFNA3P52797 MTND3P9-201ENST00000429526 346 ntBASIC1.73□□□□□ -2.13
EFNA3P52797 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.73□□□□□ -2.13
EFNA3P52797 AC016632.1-201ENST00000503994 196 ntBASIC1.73□□□□□ -2.13
EFNA3P52797 AC022447.4-201ENST00000504053 364 ntBASIC1.73□□□□□ -2.13
EFNA3P52797 MRPS17P9-201ENST00000511924 393 ntBASIC1.73□□□□□ -2.13
EFNA3P52797 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.73□□□□□ -2.13
EFNA3P52797 RNA5SP182-201ENST00000516064 82 ntBASIC1.73□□□□□ -2.13
EFNA3P52797 RNU6-566P-201ENST00000516790 107 ntBASIC1.73□□□□□ -2.13
EFNA3P52797 RNA5SP137-201ENST00000516833 135 ntBASIC1.73□□□□□ -2.13
EFNA3P52797 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.73□□□□□ -2.13
EFNA3P52797 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.73□□□□□ -2.13
EFNA3P52797 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.73□□□□□ -2.13
EFNA3P52797 MIR4790-201ENST00000577799 79 ntBASIC1.73□□□□□ -2.13
EFNA3P52797 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.73□□□□□ -2.13
EFNA3P52797 SNRPGP17-201ENST00000603780 214 ntBASIC1.73□□□□□ -2.13
EFNA3P52797 AC018889.1-201ENST00000605372 397 ntBASIC1.73□□□□□ -2.13
EFNA3P52797 AC019193.3-201ENST00000609144 554 ntBASIC1.73□□□□□ -2.13
EFNA3P52797 AL627230.6-201ENST00000611129 280 ntBASIC1.73□□□□□ -2.13
EFNA3P52797 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.73□□□□□ -2.13
EFNA3P52797 AL132822.1-201ENST00000617063 513 ntBASIC1.73□□□□□ -2.13
EFNA3P52797 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.73□□□□□ -2.13
EFNA3P52797 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.73□□□□□ -2.13
EFNA3P52797 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.73□□□□□ -2.13
EFNA3P52797 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.73□□□□□ -2.13
EFNA3P52797 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.73□□□□□ -2.13
EFNA3P52797 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.73□□□□□ -2.13
EFNA3P52797 AP000560.1-201ENST00000624150 1937 ntBASIC1.72□□□□□ -2.13
EFNA3P52797 AC092268.1-201ENST00000342691 405 ntBASIC1.72□□□□□ -2.13
EFNA3P52797 RNU6-845P-201ENST00000362578 103 ntBASIC1.72□□□□□ -2.13
EFNA3P52797 Y_RNA.151-201ENST00000363566 112 ntBASIC1.72□□□□□ -2.13
EFNA3P52797 Y_RNA.301-201ENST00000364990 103 ntBASIC1.72□□□□□ -2.13
EFNA3P52797 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
EFNA3P52797 MIR518A2-201ENST00000384966 87 ntBASIC1.72□□□□□ -2.13
EFNA3P52797 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
EFNA3P52797 RNA5SP213-201ENST00000391031 106 ntBASIC1.72□□□□□ -2.13
EFNA3P52797 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
EFNA3P52797 MIR1294-201ENST00000408503 142 ntBASIC1.72□□□□□ -2.13
EFNA3P52797 RN7SKP61-201ENST00000410642 295 ntBASIC1.72□□□□□ -2.13
EFNA3P52797 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.72□□□□□ -2.13
EFNA3P52797 AL353572.1-201ENST00000442490 417 ntBASIC1.72□□□□□ -2.13
EFNA3P52797 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.72□□□□□ -2.13
EFNA3P52797 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.72□□□□□ -2.13
EFNA3P52797 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.72□□□□□ -2.13
EFNA3P52797 RNU7-187P-201ENST00000458985 68 ntBASIC1.72□□□□□ -2.13
EFNA3P52797 RNA5SP458-201ENST00000516188 119 ntBASIC1.72□□□□□ -2.13
EFNA3P52797 Y_RNA.682-201ENST00000516457 100 ntBASIC1.72□□□□□ -2.13
EFNA3P52797 RNU7-30P-201ENST00000516835 62 ntBASIC1.72□□□□□ -2.13
EFNA3P52797 RNU6-1088P-201ENST00000516850 104 ntBASIC1.72□□□□□ -2.13
EFNA3P52797 SNORA20.3-201ENST00000516880 132 ntBASIC1.72□□□□□ -2.13
EFNA3P52797 RNU1-54P-201ENST00000517181 120 ntBASIC1.72□□□□□ -2.13
EFNA3P52797 RNU2-19P-201ENST00000517288 84 ntBASIC1.72□□□□□ -2.13
EFNA3P52797 MIR4529-201ENST00000578110 78 ntBASIC1.72□□□□□ -2.13
EFNA3P52797 MIR3136-201ENST00000583498 78 ntBASIC1.72□□□□□ -2.13
EFNA3P52797 POLR3GP2-201ENST00000588366 668 ntBASIC1.72□□□□□ -2.13
EFNA3P52797 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 151.7 ms