Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 RPS12P2-201ENST00000439728 269 ntBASIC2.39□□□□□ -2.03
CLCNKAP51800 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.39□□□□□ -2.03
CLCNKAP51800 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.39□□□□□ -2.03
CLCNKAP51800 Y_RNA.661-201ENST00000516003 99 ntBASIC2.39□□□□□ -2.03
CLCNKAP51800 RNA5SP24-201ENST00000516478 95 ntBASIC2.39□□□□□ -2.03
CLCNKAP51800 MIR4435-1-201ENST00000582552 80 ntBASIC2.39□□□□□ -2.03
CLCNKAP51800 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.39□□□□□ -2.03
CLCNKAP51800 CYP2C61P-201ENST00000604072 290 ntBASIC2.39□□□□□ -2.03
CLCNKAP51800 AC103810.6-201ENST00000606708 136 ntBASIC2.39□□□□□ -2.03
CLCNKAP51800 AC245884.12-201ENST00000615364 59 ntBASIC2.39□□□□□ -2.03
CLCNKAP51800 uc_338.22-201ENST00000622722 187 ntBASIC2.39□□□□□ -2.03
CLCNKAP51800 MIR1291-201ENST00000627649 87 ntBASIC2.39□□□□□ -2.03
CLCNKAP51800 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
CLCNKAP51800 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CLCNKAP51800 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.38□□□□□ -2.03
CLCNKAP51800 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.38□□□□□ -2.03
CLCNKAP51800 RNU6-874P-201ENST00000362390 105 ntBASIC2.38□□□□□ -2.03
CLCNKAP51800 RNU6-490P-201ENST00000362985 107 ntBASIC2.38□□□□□ -2.03
CLCNKAP51800 RNU4-9P-201ENST00000364951 139 ntBASIC2.38□□□□□ -2.03
CLCNKAP51800 XGY1-201ENST00000381172 446 ntBASIC2.38□□□□□ -2.03
CLCNKAP51800 Y_RNA.395-201ENST00000383945 109 ntBASIC2.38□□□□□ -2.03
CLCNKAP51800 Y_RNA.405-201ENST00000383979 100 ntBASIC2.38□□□□□ -2.03
CLCNKAP51800 RNU6-1032P-201ENST00000384100 107 ntBASIC2.38□□□□□ -2.03
CLCNKAP51800 Y_RNA.451-201ENST00000384200 100 ntBASIC2.38□□□□□ -2.03
CLCNKAP51800 Y_RNA.524-201ENST00000384564 100 ntBASIC2.38□□□□□ -2.03
CLCNKAP51800 RNU6-1011P-201ENST00000384668 107 ntBASIC2.38□□□□□ -2.03
CLCNKAP51800 Y_RNA.561-201ENST00000384694 100 ntBASIC2.38□□□□□ -2.03
CLCNKAP51800 SNORA12.2-201ENST00000391040 156 ntBASIC2.38□□□□□ -2.03
CLCNKAP51800 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.38□□□□□ -2.03
CLCNKAP51800 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.38□□□□□ -2.03
CLCNKAP51800 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.38□□□□□ -2.03
CLCNKAP51800 AC092423.1-201ENST00000430165 186 ntBASIC2.38□□□□□ -2.03
CLCNKAP51800 TOMM22P6-201ENST00000465035 409 ntBASIC2.38□□□□□ -2.03
CLCNKAP51800 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.38□□□□□ -2.03
CLCNKAP51800 SNORA31.11-201ENST00000516528 139 ntBASIC2.38□□□□□ -2.03
CLCNKAP51800 RNA5SP82-201ENST00000516707 92 ntBASIC2.38□□□□□ -2.03
CLCNKAP51800 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.38□□□□□ -2.03
CLCNKAP51800 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.38□□□□□ -2.03
CLCNKAP51800 AC016256.1-201ENST00000547971 354 ntBASIC2.38□□□□□ -2.03
CLCNKAP51800 AC004584.2-201ENST00000570407 410 ntBASIC2.38□□□□□ -2.03
CLCNKAP51800 AC105245.1-201ENST00000581934 244 ntBASIC2.38□□□□□ -2.03
CLCNKAP51800 AL590808.1-201ENST00000618696 141 ntBASIC2.38□□□□□ -2.03
CLCNKAP51800 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
CLCNKAP51800 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
CLCNKAP51800 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CLCNKAP51800 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CLCNKAP51800 Y_RNA.216-201ENST00000364205 93 ntBASIC2.37□□□□□ -2.03
CLCNKAP51800 Y_RNA.496-201ENST00000384444 101 ntBASIC2.37□□□□□ -2.03
CLCNKAP51800 CBX3P9-201ENST00000402326 552 ntBASIC2.37□□□□□ -2.03
CLCNKAP51800 SNORA11.2-201ENST00000408318 127 ntBASIC2.37□□□□□ -2.03
CLCNKAP51800 MIR548P-201ENST00000408336 84 ntBASIC2.37□□□□□ -2.03
CLCNKAP51800 U6atac.2-201ENST00000408644 118 ntBASIC2.37□□□□□ -2.03
CLCNKAP51800 AC012306.1-201ENST00000423267 114 ntBASIC2.37□□□□□ -2.03
CLCNKAP51800 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.37□□□□□ -2.03
CLCNKAP51800 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.37□□□□□ -2.03
CLCNKAP51800 MTCYBP6-201ENST00000441810 138 ntBASIC2.37□□□□□ -2.03
CLCNKAP51800 AL137792.2-201ENST00000443484 235 ntBASIC2.37□□□□□ -2.03
CLCNKAP51800 AC090515.1-201ENST00000465295 476 ntBASIC2.37□□□□□ -2.03
CLCNKAP51800 RN7SL636P-201ENST00000497504 294 ntBASIC2.37□□□□□ -2.03
CLCNKAP51800 AC234781.5-201ENST00000508429 271 ntBASIC2.37□□□□□ -2.03
CLCNKAP51800 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.37□□□□□ -2.03
CLCNKAP51800 RNU6-976P-201ENST00000516086 111 ntBASIC2.37□□□□□ -2.03
CLCNKAP51800 AC020661.2-201ENST00000560114 134 ntBASIC2.37□□□□□ -2.03
CLCNKAP51800 SUB1P3-201ENST00000564581 315 ntBASIC2.37□□□□□ -2.03
CLCNKAP51800 AC009127.3-201ENST00000570531 403 ntBASIC2.37□□□□□ -2.03
CLCNKAP51800 MIR3136-201ENST00000583498 78 ntBASIC2.37□□□□□ -2.03
CLCNKAP51800 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.37□□□□□ -2.03
CLCNKAP51800 AC090517.3-201ENST00000625170 141 ntBASIC2.37□□□□□ -2.03
CLCNKAP51800 AC134503.1-201ENST00000633048 54 ntBASIC2.37□□□□□ -2.03
CLCNKAP51800 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
CLCNKAP51800 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.37□□□□□ -2.03
CLCNKAP51800 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CLCNKAP51800 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CLCNKAP51800 AC069528.2-201ENST00000624849 1991 ntBASIC2.36□□□□□ -2.03
CLCNKAP51800 RNU4-15P-201ENST00000362613 141 ntBASIC2.36□□□□□ -2.03
CLCNKAP51800 RNY3P11-201ENST00000364153 102 ntBASIC2.36□□□□□ -2.03
CLCNKAP51800 RNA5SP126-201ENST00000365092 109 ntBASIC2.36□□□□□ -2.03
CLCNKAP51800 RNU6-1227P-201ENST00000383981 107 ntBASIC2.36□□□□□ -2.03
CLCNKAP51800 MIR32-201ENST00000384965 70 ntBASIC2.36□□□□□ -2.03
CLCNKAP51800 RNU6-700P-201ENST00000391043 107 ntBASIC2.36□□□□□ -2.03
CLCNKAP51800 MIR1302-11-201ENST00000408051 138 ntBASIC2.36□□□□□ -2.03
CLCNKAP51800 MIR1302-9-201ENST00000408365 138 ntBASIC2.36□□□□□ -2.03
CLCNKAP51800 MIR1302-10-201ENST00000408734 138 ntBASIC2.36□□□□□ -2.03
CLCNKAP51800 PMCHL1-202ENST00000423102 261 ntBASIC2.36□□□□□ -2.03
CLCNKAP51800 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.36□□□□□ -2.03
CLCNKAP51800 snoU13.30-201ENST00000458951 104 ntBASIC2.36□□□□□ -2.03
CLCNKAP51800 RN7SKP210-201ENST00000459176 261 ntBASIC2.36□□□□□ -2.03
CLCNKAP51800 Y_RNA.631-201ENST00000459607 101 ntBASIC2.36□□□□□ -2.03
CLCNKAP51800 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.36□□□□□ -2.03
CLCNKAP51800 HMGB3P3-201ENST00000510526 400 ntBASIC2.36□□□□□ -2.03
CLCNKAP51800 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.36□□□□□ -2.03
CLCNKAP51800 AC021269.2-201ENST00000532318 330 ntBASIC2.36□□□□□ -2.03
CLCNKAP51800 SNRPGP18-201ENST00000553000 214 ntBASIC2.36□□□□□ -2.03
CLCNKAP51800 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.36□□□□□ -2.03
CLCNKAP51800 MIR3171-201ENST00000584270 74 ntBASIC2.36□□□□□ -2.03
CLCNKAP51800 MIR4719-201ENST00000585233 84 ntBASIC2.36□□□□□ -2.03
CLCNKAP51800 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.36□□□□□ -2.03
CLCNKAP51800 SNRPGP17-201ENST00000603780 214 ntBASIC2.36□□□□□ -2.03
CLCNKAP51800 MIR1302-2-201ENST00000607096 138 ntBASIC2.36□□□□□ -2.03
CLCNKAP51800 AL355802.3-201ENST00000607571 545 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms