Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 SNORD32A-201ENST00000364805 84 ntBASIC3.43□□□□□ -1.86
MRE11P49959 RNU6-209P-201ENST00000384118 107 ntBASIC3.43□□□□□ -1.86
MRE11P49959 MIR181A2-201ENST00000384863 110 ntBASIC3.43□□□□□ -1.86
MRE11P49959 RNU6-482P-201ENST00000391068 107 ntBASIC3.43□□□□□ -1.86
MRE11P49959 MRPL35P1-201ENST00000404272 572 ntBASIC3.43□□□□□ -1.86
MRE11P49959 RNA5SP184-201ENST00000411071 108 ntBASIC3.43□□□□□ -1.86
MRE11P49959 RNU6-1245P-201ENST00000411130 106 ntBASIC3.43□□□□□ -1.86
MRE11P49959 EIF1AXP1-201ENST00000419267 435 ntBASIC3.43□□□□□ -1.86
MRE11P49959 IFNA11P-201ENST00000446352 526 ntBASIC3.43□□□□□ -1.86
MRE11P49959 AC109925.1-201ENST00000478069 331 ntBASIC3.43□□□□□ -1.86
MRE11P49959 RPS27AP10-201ENST00000496103 208 ntBASIC3.43□□□□□ -1.86
MRE11P49959 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.43□□□□□ -1.86
MRE11P49959 SNORA31.6-201ENST00000516241 130 ntBASIC3.43□□□□□ -1.86
MRE11P49959 AC022868.1-201ENST00000517767 391 ntBASIC3.43□□□□□ -1.86
MRE11P49959 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.43□□□□□ -1.86
MRE11P49959 AC010900.2-201ENST00000604508 210 ntBASIC3.43□□□□□ -1.86
MRE11P49959 RMST_6.1-201ENST00000611980 203 ntBASIC3.43□□□□□ -1.86
MRE11P49959 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.43□□□□□ -1.86
MRE11P49959 AC024581.2-201ENST00000619986 252 ntBASIC3.43□□□□□ -1.86
MRE11P49959 AL161431.1-201ENST00000618966 4205 ntBASIC3.43□□□□□ -1.86
MRE11P49959 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.42□□□□□ -1.86
MRE11P49959 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
MRE11P49959 SNORD56.1-201ENST00000362913 68 ntBASIC3.42□□□□□ -1.86
MRE11P49959 Y_RNA.226-201ENST00000364337 114 ntBASIC3.42□□□□□ -1.86
MRE11P49959 Y_RNA.539-201ENST00000384635 107 ntBASIC3.42□□□□□ -1.86
MRE11P49959 SNORD78.2-201ENST00000391076 69 ntBASIC3.42□□□□□ -1.86
MRE11P49959 AL603908.1-201ENST00000406098 201 ntBASIC3.42□□□□□ -1.86
MRE11P49959 NDUFS5P4-201ENST00000412983 318 ntBASIC3.42□□□□□ -1.86
MRE11P49959 RPL23AP95-201ENST00000426806 265 ntBASIC3.42□□□□□ -1.86
MRE11P49959 RNU6-138P-201ENST00000515952 107 ntBASIC3.42□□□□□ -1.86
MRE11P49959 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.42□□□□□ -1.86
MRE11P49959 DEFB108E-201ENST00000524692 240 ntBASIC3.42□□□□□ -1.86
MRE11P49959 CR383656.8-201ENST00000549046 145 ntBASIC3.42□□□□□ -1.86
MRE11P49959 HIGD1AP1-201ENST00000550979 275 ntBASIC3.42□□□□□ -1.86
MRE11P49959 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.42□□□□□ -1.86
MRE11P49959 MIR4319-201ENST00000577285 85 ntBASIC3.42□□□□□ -1.86
MRE11P49959 MIR3670-2-201ENST00000582974 65 ntBASIC3.42□□□□□ -1.86
MRE11P49959 MIR3670-1-201ENST00000584160 65 ntBASIC3.42□□□□□ -1.86
MRE11P49959 MIR3670-3-201ENST00000584855 65 ntBASIC3.42□□□□□ -1.86
MRE11P49959 ELOCP29-201ENST00000588193 334 ntBASIC3.42□□□□□ -1.86
MRE11P49959 AL162713.1-201ENST00000604480 262 ntBASIC3.42□□□□□ -1.86
MRE11P49959 AC090115.4-201ENST00000609970 188 ntBASIC3.42□□□□□ -1.86
MRE11P49959 MIR3670-4-201ENST00000612260 65 ntBASIC3.42□□□□□ -1.86
MRE11P49959 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.41□□□□□ -1.86
MRE11P49959 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
MRE11P49959 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.41□□□□□ -1.86
MRE11P49959 SNORD81.1-201ENST00000363064 77 ntBASIC3.41□□□□□ -1.86
MRE11P49959 RNU6-200P-201ENST00000364743 107 ntBASIC3.41□□□□□ -1.86
MRE11P49959 RNU6-338P-201ENST00000383888 105 ntBASIC3.41□□□□□ -1.86
MRE11P49959 RNU6-1035P-201ENST00000384477 107 ntBASIC3.41□□□□□ -1.86
MRE11P49959 MIR32-201ENST00000384965 70 ntBASIC3.41□□□□□ -1.86
MRE11P49959 FTH1P15-201ENST00000406984 280 ntBASIC3.41□□□□□ -1.86
MRE11P49959 AC074117.2-201ENST00000417130 397 ntBASIC3.41□□□□□ -1.86
MRE11P49959 AC007969.2-201ENST00000441891 191 ntBASIC3.41□□□□□ -1.86
MRE11P49959 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.41□□□□□ -1.86
MRE11P49959 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.41□□□□□ -1.86
MRE11P49959 AP000705.1-201ENST00000454567 350 ntBASIC3.41□□□□□ -1.86
MRE11P49959 snoU13.15-201ENST00000459407 104 ntBASIC3.41□□□□□ -1.86
MRE11P49959 AC087477.1-201ENST00000465747 340 ntBASIC3.41□□□□□ -1.86
MRE11P49959 AC103975.1-201ENST00000482506 483 ntBASIC3.41□□□□□ -1.86
MRE11P49959 RPS23P5-201ENST00000495419 428 ntBASIC3.41□□□□□ -1.86
MRE11P49959 RNU6-928P-201ENST00000516876 104 ntBASIC3.41□□□□□ -1.86
MRE11P49959 AC015712.3-201ENST00000559380 164 ntBASIC3.41□□□□□ -1.86
MRE11P49959 AC023824.2-201ENST00000566185 400 ntBASIC3.41□□□□□ -1.86
MRE11P49959 MIR4659A-201ENST00000580269 81 ntBASIC3.41□□□□□ -1.86
MRE11P49959 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.41□□□□□ -1.86
MRE11P49959 AC011476.5-201ENST00000615594 130 ntBASIC3.41□□□□□ -1.86
MRE11P49959 SNORA43.4-201ENST00000629559 138 ntBASIC3.41□□□□□ -1.86
MRE11P49959 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.4□□□□□ -1.86
MRE11P49959 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.4□□□□□ -1.86
MRE11P49959 RNU1-35P-201ENST00000362782 153 ntBASIC3.4□□□□□ -1.87
MRE11P49959 RNU6-270P-201ENST00000364131 105 ntBASIC3.4□□□□□ -1.87
MRE11P49959 CD24P4-201ENST00000382840 243 ntBASIC3.4□□□□□ -1.87
MRE11P49959 SNORA29-201ENST00000384183 140 ntBASIC3.4□□□□□ -1.87
MRE11P49959 MIR153-2-201ENST00000385225 87 ntBASIC3.4□□□□□ -1.87
MRE11P49959 Y_RNA.581-201ENST00000391017 97 ntBASIC3.4□□□□□ -1.87
MRE11P49959 RNA5SP213-201ENST00000391031 106 ntBASIC3.4□□□□□ -1.87
MRE11P49959 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.4□□□□□ -1.87
MRE11P49959 RNU2-20P-201ENST00000410425 191 ntBASIC3.4□□□□□ -1.87
MRE11P49959 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.4□□□□□ -1.87
MRE11P49959 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
MRE11P49959 EIF1P2-201ENST00000428233 350 ntBASIC3.4□□□□□ -1.87
MRE11P49959 SUMO1P3-201ENST00000439961 304 ntBASIC3.4□□□□□ -1.87
MRE11P49959 AC016700.2-201ENST00000446011 156 ntBASIC3.4□□□□□ -1.87
MRE11P49959 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.4□□□□□ -1.87
MRE11P49959 MRPL42P6-201ENST00000486397 371 ntBASIC3.4□□□□□ -1.87
MRE11P49959 RPS29P20-201ENST00000489592 171 ntBASIC3.4□□□□□ -1.87
MRE11P49959 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.4□□□□□ -1.87
MRE11P49959 RNU6-1338P-201ENST00000516328 91 ntBASIC3.4□□□□□ -1.87
MRE11P49959 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.4□□□□□ -1.87
MRE11P49959 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
MRE11P49959 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.4□□□□□ -1.87
MRE11P49959 AC009779.6-201ENST00000603972 165 ntBASIC3.4□□□□□ -1.87
MRE11P49959 AC019159.1-201ENST00000605094 187 ntBASIC3.4□□□□□ -1.87
MRE11P49959 AL356157.2-201ENST00000605122 111 ntBASIC3.4□□□□□ -1.87
MRE11P49959 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
MRE11P49959 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.4□□□□□ -1.87
MRE11P49959 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.4□□□□□ -1.87
MRE11P49959 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
MRE11P49959 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms