Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 RNU7-110P-201ENST00000516891 62 ntBASIC3□□□□□ -1.93
CLK3P49761 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3□□□□□ -1.93
CLK3P49761 AC022559.1-201ENST00000520905 205 ntBASIC3□□□□□ -1.93
CLK3P49761 AC016256.1-201ENST00000547971 354 ntBASIC3□□□□□ -1.93
CLK3P49761 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3□□□□□ -1.93
CLK3P49761 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3□□□□□ -1.93
CLK3P49761 AL356157.2-201ENST00000605122 111 ntBASIC3□□□□□ -1.93
CLK3P49761 AC004832.4-201ENST00000608952 331 ntBASIC3□□□□□ -1.93
CLK3P49761 MIR6134-201ENST00000617606 109 ntBASIC3□□□□□ -1.93
CLK3P49761 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CLK3P49761 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3□□□□□ -1.93
CLK3P49761 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CLK3P49761 AC092435.3-201ENST00000565538 3654 ntBASIC2.99□□□□□ -1.93
CLK3P49761 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CLK3P49761 SNORA71.3-201ENST00000362582 128 ntBASIC2.99□□□□□ -1.93
CLK3P49761 RNA5SP361-201ENST00000362686 118 ntBASIC2.99□□□□□ -1.93
CLK3P49761 RNU6-137P-201ENST00000363680 108 ntBASIC2.99□□□□□ -1.93
CLK3P49761 Y_RNA.233-201ENST00000364407 101 ntBASIC2.99□□□□□ -1.93
CLK3P49761 RNU6-898P-201ENST00000365627 104 ntBASIC2.99□□□□□ -1.93
CLK3P49761 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CLK3P49761 RNU6-1245P-201ENST00000411130 106 ntBASIC2.99□□□□□ -1.93
CLK3P49761 AC023141.4-201ENST00000412031 328 ntBASIC2.99□□□□□ -1.93
CLK3P49761 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.99□□□□□ -1.93
CLK3P49761 AL451074.5-201ENST00000415894 435 ntBASIC2.99□□□□□ -1.93
CLK3P49761 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.99□□□□□ -1.93
CLK3P49761 AC243964.1-201ENST00000441814 261 ntBASIC2.99□□□□□ -1.93
CLK3P49761 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.99□□□□□ -1.93
CLK3P49761 Y_RNA.638-201ENST00000459374 113 ntBASIC2.99□□□□□ -1.93
CLK3P49761 AC091021.1-201ENST00000468051 388 ntBASIC2.99□□□□□ -1.93
CLK3P49761 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.99□□□□□ -1.93
CLK3P49761 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.99□□□□□ -1.93
CLK3P49761 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CLK3P49761 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
CLK3P49761 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.99□□□□□ -1.93
CLK3P49761 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
CLK3P49761 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CLK3P49761 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.98□□□□□ -1.93
CLK3P49761 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CLK3P49761 GABRG2-229ENST00000641017 3628 ntBASIC2.98□□□□□ -1.93
CLK3P49761 MIR410-201ENST00000362222 80 ntBASIC2.98□□□□□ -1.93
CLK3P49761 Y_RNA.230-201ENST00000364348 109 ntBASIC2.98□□□□□ -1.93
CLK3P49761 RNU6-1027P-201ENST00000383998 107 ntBASIC2.98□□□□□ -1.93
CLK3P49761 RNU6-142P-201ENST00000384019 107 ntBASIC2.98□□□□□ -1.93
CLK3P49761 RNU6-1081P-201ENST00000384537 107 ntBASIC2.98□□□□□ -1.93
CLK3P49761 RNU6-541P-201ENST00000384709 110 ntBASIC2.98□□□□□ -1.93
CLK3P49761 Y_RNA.570-201ENST00000384750 101 ntBASIC2.98□□□□□ -1.93
CLK3P49761 MIR767-201ENST00000390228 109 ntBASIC2.98□□□□□ -1.93
CLK3P49761 RNU6-918P-201ENST00000391219 106 ntBASIC2.98□□□□□ -1.93
CLK3P49761 RNA5SP354-201ENST00000391247 136 ntBASIC2.98□□□□□ -1.93
CLK3P49761 RN7SKP51-201ENST00000410781 304 ntBASIC2.98□□□□□ -1.93
CLK3P49761 RNU6-651P-201ENST00000411040 105 ntBASIC2.98□□□□□ -1.93
CLK3P49761 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.98□□□□□ -1.93
CLK3P49761 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.98□□□□□ -1.93
CLK3P49761 AC007395.1-201ENST00000451333 677 ntBASIC2.98□□□□□ -1.93
CLK3P49761 UQCRHP3-201ENST00000451503 251 ntBASIC2.98□□□□□ -1.93
CLK3P49761 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.98□□□□□ -1.93
CLK3P49761 RN7SL807P-201ENST00000470923 297 ntBASIC2.98□□□□□ -1.93
CLK3P49761 AC117440.1-201ENST00000474107 571 ntBASIC2.98□□□□□ -1.93
CLK3P49761 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.98□□□□□ -1.93
CLK3P49761 SNORA27.4-201ENST00000516650 95 ntBASIC2.98□□□□□ -1.93
CLK3P49761 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.98□□□□□ -1.93
CLK3P49761 AC027288.2-201ENST00000553028 243 ntBASIC2.98□□□□□ -1.93
CLK3P49761 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.98□□□□□ -1.93
CLK3P49761 AC005296.1-201ENST00000616145 209 ntBASIC2.98□□□□□ -1.93
CLK3P49761 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CLK3P49761 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.97□□□□□ -1.93
CLK3P49761 RNU6-942P-201ENST00000363002 107 ntBASIC2.97□□□□□ -1.93
CLK3P49761 RNU5B-2P-201ENST00000363036 113 ntBASIC2.97□□□□□ -1.93
CLK3P49761 RNU6-626P-201ENST00000363354 107 ntBASIC2.97□□□□□ -1.93
CLK3P49761 Y_RNA.136-201ENST00000363444 102 ntBASIC2.97□□□□□ -1.93
CLK3P49761 RNA5SP139-201ENST00000364340 117 ntBASIC2.97□□□□□ -1.93
CLK3P49761 RNA5SP267-201ENST00000364893 126 ntBASIC2.97□□□□□ -1.93
CLK3P49761 Y_RNA.319-201ENST00000365138 92 ntBASIC2.97□□□□□ -1.93
CLK3P49761 RNU6-81P-201ENST00000365608 104 ntBASIC2.97□□□□□ -1.93
CLK3P49761 Y_RNA.383-201ENST00000383855 97 ntBASIC2.97□□□□□ -1.93
CLK3P49761 Y_RNA.435-201ENST00000384095 112 ntBASIC2.97□□□□□ -1.93
CLK3P49761 SNORA29-201ENST00000384183 140 ntBASIC2.97□□□□□ -1.93
CLK3P49761 RNU6-281P-201ENST00000384212 103 ntBASIC2.97□□□□□ -1.93
CLK3P49761 MIR10B-201ENST00000385011 110 ntBASIC2.97□□□□□ -1.93
CLK3P49761 MIR518D-201ENST00000385014 87 ntBASIC2.97□□□□□ -1.93
CLK3P49761 SNORA46.1-201ENST00000391069 153 ntBASIC2.97□□□□□ -1.93
CLK3P49761 RNA5SP171-201ENST00000391071 115 ntBASIC2.97□□□□□ -1.93
CLK3P49761 RNU2-49P-201ENST00000410666 184 ntBASIC2.97□□□□□ -1.93
CLK3P49761 RNU6-394P-201ENST00000410735 107 ntBASIC2.97□□□□□ -1.93
CLK3P49761 RNU4-47P-201ENST00000410876 114 ntBASIC2.97□□□□□ -1.93
CLK3P49761 RPL23AP95-201ENST00000426806 265 ntBASIC2.97□□□□□ -1.93
CLK3P49761 AC104332.2-201ENST00000429959 156 ntBASIC2.97□□□□□ -1.93
CLK3P49761 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.97□□□□□ -1.93
CLK3P49761 SNORD2.1-201ENST00000458762 69 ntBASIC2.97□□□□□ -1.93
CLK3P49761 AP001324.2-201ENST00000461163 319 ntBASIC2.97□□□□□ -1.93
CLK3P49761 AC091959.1-201ENST00000495857 238 ntBASIC2.97□□□□□ -1.93
CLK3P49761 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.97□□□□□ -1.93
CLK3P49761 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.97□□□□□ -1.93
CLK3P49761 RNU6-567P-201ENST00000516746 107 ntBASIC2.97□□□□□ -1.93
CLK3P49761 MRPS18CP4-201ENST00000535821 231 ntBASIC2.97□□□□□ -1.93
CLK3P49761 AC006199.1-201ENST00000548728 219 ntBASIC2.97□□□□□ -1.93
CLK3P49761 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.97□□□□□ -1.93
CLK3P49761 AC025281.1-201ENST00000567026 265 ntBASIC2.97□□□□□ -1.93
CLK3P49761 MIR3144-201ENST00000579460 79 ntBASIC2.97□□□□□ -1.93
CLK3P49761 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms