Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 RPL9P9-202ENST00000466501 579 ntBASIC2.31□□□□□ -2.04
CLK1P49759 AC022447.4-201ENST00000504053 364 ntBASIC2.31□□□□□ -2.04
CLK1P49759 AC022493.2-201ENST00000506122 481 ntBASIC2.31□□□□□ -2.04
CLK1P49759 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.31□□□□□ -2.04
CLK1P49759 MIR4319-201ENST00000577285 85 ntBASIC2.31□□□□□ -2.04
CLK1P49759 AL670379.2-201ENST00000604983 252 ntBASIC2.31□□□□□ -2.04
CLK1P49759 AC005014.2-201ENST00000607795 599 ntBASIC2.31□□□□□ -2.04
CLK1P49759 AC007485.1-201ENST00000616755 206 ntBASIC2.31□□□□□ -2.04
CLK1P49759 U4.3-201ENST00000621047 82 ntBASIC2.31□□□□□ -2.04
CLK1P49759 SCARNA4-202ENST00000625402 129 ntBASIC2.31□□□□□ -2.04
CLK1P49759 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
CLK1P49759 MTND4P1-201ENST00000457501 1466 ntBASIC2.31□□□□□ -2.04
CLK1P49759 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CLK1P49759 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CLK1P49759 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CLK1P49759 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CLK1P49759 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
CLK1P49759 RNU6-490P-201ENST00000362985 107 ntBASIC2.3□□□□□ -2.04
CLK1P49759 RNA5SP456-201ENST00000364002 114 ntBASIC2.3□□□□□ -2.04
CLK1P49759 RNU5E-7P-201ENST00000365290 117 ntBASIC2.3□□□□□ -2.04
CLK1P49759 RNU6-1032P-201ENST00000384100 107 ntBASIC2.3□□□□□ -2.04
CLK1P49759 SNORA51.11-201ENST00000384442 131 ntBASIC2.3□□□□□ -2.04
CLK1P49759 RNU6-790P-201ENST00000384479 105 ntBASIC2.3□□□□□ -2.04
CLK1P49759 MIR196B-201ENST00000384852 84 ntBASIC2.3□□□□□ -2.04
CLK1P49759 AC113618.1-201ENST00000416747 285 ntBASIC2.3□□□□□ -2.04
CLK1P49759 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.3□□□□□ -2.04
CLK1P49759 MRPS18CP6-201ENST00000423587 223 ntBASIC2.3□□□□□ -2.04
CLK1P49759 AC008267.5-201ENST00000424928 265 ntBASIC2.3□□□□□ -2.04
CLK1P49759 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.3□□□□□ -2.04
CLK1P49759 ARL5AP4-201ENST00000430731 512 ntBASIC2.3□□□□□ -2.04
CLK1P49759 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.3□□□□□ -2.04
CLK1P49759 RPS15AP10-201ENST00000432472 382 ntBASIC2.3□□□□□ -2.04
CLK1P49759 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.3□□□□□ -2.04
CLK1P49759 AL031659.1-201ENST00000447075 539 ntBASIC2.3□□□□□ -2.04
CLK1P49759 AC006026.2-201ENST00000457376 180 ntBASIC2.3□□□□□ -2.04
CLK1P49759 FO393415.2-201ENST00000480085 343 ntBASIC2.3□□□□□ -2.04
CLK1P49759 SNORA43.2-201ENST00000516652 128 ntBASIC2.3□□□□□ -2.04
CLK1P49759 RNU6-988P-201ENST00000519081 107 ntBASIC2.3□□□□□ -2.04
CLK1P49759 CBX3P8-201ENST00000532412 525 ntBASIC2.3□□□□□ -2.04
CLK1P49759 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.3□□□□□ -2.04
CLK1P49759 SUB1P3-201ENST00000564581 315 ntBASIC2.3□□□□□ -2.04
CLK1P49759 MIR4680-201ENST00000580906 66 ntBASIC2.3□□□□□ -2.04
CLK1P49759 AL158827.2-201ENST00000602494 330 ntBASIC2.3□□□□□ -2.04
CLK1P49759 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.3□□□□□ -2.04
CLK1P49759 AL691447.3-201ENST00000635020 330 ntBASIC2.3□□□□□ -2.04
CLK1P49759 AC005336.3-201ENST00000623833 2679 ntBASIC2.3□□□□□ -2.04
CLK1P49759 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CLK1P49759 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
CLK1P49759 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CLK1P49759 RNA5SP276-201ENST00000362580 94 ntBASIC2.29□□□□□ -2.04
CLK1P49759 Y_RNA.48-201ENST00000362710 103 ntBASIC2.29□□□□□ -2.04
CLK1P49759 Y_RNA.145-201ENST00000363527 102 ntBASIC2.29□□□□□ -2.04
CLK1P49759 RNU6-105P-201ENST00000363909 104 ntBASIC2.29□□□□□ -2.04
CLK1P49759 RNU6-639P-201ENST00000384074 107 ntBASIC2.29□□□□□ -2.04
CLK1P49759 MIR518A2-201ENST00000384966 87 ntBASIC2.29□□□□□ -2.04
CLK1P49759 MIR29C-201ENST00000385231 88 ntBASIC2.29□□□□□ -2.04
CLK1P49759 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
CLK1P49759 AL591034.2-201ENST00000402839 359 ntBASIC2.29□□□□□ -2.04
CLK1P49759 RNU2-52P-201ENST00000410680 190 ntBASIC2.29□□□□□ -2.04
CLK1P49759 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.29□□□□□ -2.04
CLK1P49759 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.29□□□□□ -2.04
CLK1P49759 TOMM20P4-201ENST00000427861 435 ntBASIC2.29□□□□□ -2.04
CLK1P49759 AL109933.2-201ENST00000452651 260 ntBASIC2.29□□□□□ -2.04
CLK1P49759 RPL23AP3-201ENST00000453844 468 ntBASIC2.29□□□□□ -2.04
CLK1P49759 AK3P2-201ENST00000507976 429 ntBASIC2.29□□□□□ -2.04
CLK1P49759 RNU6-1046P-201ENST00000516538 107 ntBASIC2.29□□□□□ -2.04
CLK1P49759 AP000889.1-201ENST00000530968 660 ntBASIC2.29□□□□□ -2.04
CLK1P49759 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.29□□□□□ -2.04
CLK1P49759 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.29□□□□□ -2.04
CLK1P49759 MIR4299-201ENST00000577899 72 ntBASIC2.29□□□□□ -2.04
CLK1P49759 AC005899.2-201ENST00000584353 90 ntBASIC2.29□□□□□ -2.04
CLK1P49759 BNIP3P16-201ENST00000589779 534 ntBASIC2.29□□□□□ -2.04
CLK1P49759 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.29□□□□□ -2.04
CLK1P49759 MIR8076-201ENST00000611401 83 ntBASIC2.29□□□□□ -2.04
CLK1P49759 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CLK1P49759 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.29□□□□□ -2.04
CLK1P49759 SNORD50.1-201ENST00000362987 71 ntBASIC2.28□□□□□ -2.04
CLK1P49759 RNU6-487P-201ENST00000365430 104 ntBASIC2.28□□□□□ -2.04
CLK1P49759 RNU4-52P-201ENST00000384209 138 ntBASIC2.28□□□□□ -2.04
CLK1P49759 RNA5SP450-201ENST00000411206 102 ntBASIC2.28□□□□□ -2.04
CLK1P49759 AL160004.2-201ENST00000432935 350 ntBASIC2.28□□□□□ -2.04
CLK1P49759 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.28□□□□□ -2.04
CLK1P49759 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.28□□□□□ -2.04
CLK1P49759 AC079354.2-201ENST00000453523 154 ntBASIC2.28□□□□□ -2.04
CLK1P49759 RNU6-377P-201ENST00000515965 102 ntBASIC2.28□□□□□ -2.04
CLK1P49759 ACA59.1-201ENST00000515966 143 ntBASIC2.28□□□□□ -2.04
CLK1P49759 RNU2-53P-201ENST00000516257 147 ntBASIC2.28□□□□□ -2.04
CLK1P49759 RNU6-307P-201ENST00000516743 106 ntBASIC2.28□□□□□ -2.04
CLK1P49759 RNU6-612P-201ENST00000516909 102 ntBASIC2.28□□□□□ -2.04
CLK1P49759 AP004607.1-201ENST00000524456 203 ntBASIC2.28□□□□□ -2.04
CLK1P49759 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.28□□□□□ -2.04
CLK1P49759 AC233702.2-202ENST00000562547 291 ntBASIC2.28□□□□□ -2.04
CLK1P49759 MIR5696-201ENST00000578474 85 ntBASIC2.28□□□□□ -2.04
CLK1P49759 AC136443.5-201ENST00000603741 370 ntBASIC2.28□□□□□ -2.04
CLK1P49759 AP001836.1-201ENST00000604675 523 ntBASIC2.28□□□□□ -2.04
CLK1P49759 AC018889.1-201ENST00000605372 397 ntBASIC2.28□□□□□ -2.04
CLK1P49759 AC022202.1-201ENST00000613515 211 ntBASIC2.28□□□□□ -2.04
CLK1P49759 AC083806.3-201ENST00000614016 455 ntBASIC2.28□□□□□ -2.04
CLK1P49759 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.28□□□□□ -2.04
CLK1P49759 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms