Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AC092354.1-201ENST00000606057 376 ntBASIC0.09□□□□□ -2.4
SRP9P49458 U4.7-201ENST00000638126 106 ntBASIC0.09□□□□□ -2.4
SRP9P49458 RNU6-1141P-201ENST00000364520 107 ntBASIC0.08□□□□□ -2.4
SRP9P49458 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.08□□□□□ -2.4
SRP9P49458 RNA5SP323-201ENST00000391094 133 ntBASIC0.08□□□□□ -2.4
SRP9P49458 MTND3P20-201ENST00000407663 186 ntBASIC0.08□□□□□ -2.4
SRP9P49458 AC006366.1-201ENST00000422002 759 ntBASIC0.08□□□□□ -2.4
SRP9P49458 AC244098.3-201ENST00000424803 96 ntBASIC0.08□□□□□ -2.4
SRP9P49458 AC016717.1-201ENST00000448918 286 ntBASIC0.08□□□□□ -2.4
SRP9P49458 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.08□□□□□ -2.4
SRP9P49458 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.08□□□□□ -2.4
SRP9P49458 AC108740.1-201ENST00000498629 225 ntBASIC0.08□□□□□ -2.4
SRP9P49458 AK3P2-201ENST00000507976 429 ntBASIC0.08□□□□□ -2.4
SRP9P49458 AC105313.1-201ENST00000509121 353 ntBASIC0.08□□□□□ -2.4
SRP9P49458 AC025465.4-201ENST00000513422 638 ntBASIC0.08□□□□□ -2.4
SRP9P49458 RNU2-10P-201ENST00000516375 211 ntBASIC0.08□□□□□ -2.4
SRP9P49458 AC013828.2-201ENST00000532487 235 ntBASIC0.08□□□□□ -2.4
SRP9P49458 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC0.08□□□□□ -2.4
SRP9P49458 TMF1P1-201ENST00000576058 373 ntBASIC0.08□□□□□ -2.4
SRP9P49458 AC025627.3-201ENST00000582078 182 ntBASIC0.08□□□□□ -2.4
SRP9P49458 AC078795.3-201ENST00000602913 472 ntBASIC0.08□□□□□ -2.4
SRP9P49458 AC023932.2-201ENST00000603176 175 ntBASIC0.08□□□□□ -2.4
SRP9P49458 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC0.08□□□□□ -2.4
SRP9P49458 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.08□□□□□ -2.4
SRP9P49458 AL163152.1-201ENST00000642001 374 ntBASIC0.08□□□□□ -2.4
SRP9P49458 RNY4P16-201ENST00000364768 94 ntBASIC0.07□□□□□ -2.4
SRP9P49458 RNU4-48P-201ENST00000365559 182 ntBASIC0.07□□□□□ -2.4
SRP9P49458 SNORA12.1-201ENST00000390873 148 ntBASIC0.07□□□□□ -2.4
SRP9P49458 RPS20P2-201ENST00000402520 389 ntBASIC0.07□□□□□ -2.4
SRP9P49458 MIR1295A-201ENST00000408463 79 ntBASIC0.07□□□□□ -2.4
SRP9P49458 CALM2P2-201ENST00000428512 440 ntBASIC0.07□□□□□ -2.4
SRP9P49458 HSFY7P-201ENST00000432672 318 ntBASIC0.07□□□□□ -2.4
SRP9P49458 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.07□□□□□ -2.4
SRP9P49458 AC002486.1-201ENST00000435098 391 ntBASIC0.07□□□□□ -2.4
SRP9P49458 HSFY8P-201ENST00000437934 318 ntBASIC0.07□□□□□ -2.4
SRP9P49458 U7.7-201ENST00000459276 60 ntBASIC0.07□□□□□ -2.4
SRP9P49458 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.07□□□□□ -2.4
SRP9P49458 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.07□□□□□ -2.4
SRP9P49458 AC027419.1-201ENST00000522976 328 ntBASIC0.07□□□□□ -2.4
SRP9P49458 AC026616.1-201ENST00000523157 525 ntBASIC0.07□□□□□ -2.4
SRP9P49458 MIR1273G-201ENST00000577677 100 ntBASIC0.07□□□□□ -2.4
SRP9P49458 PRELID3BP2-201ENST00000605362 201 ntBASIC0.07□□□□□ -2.4
SRP9P49458 AC097478.2-201ENST00000610572 514 ntBASIC0.07□□□□□ -2.4
SRP9P49458 AC012409.4-201ENST00000612923 249 ntBASIC0.07□□□□□ -2.4
SRP9P49458 AC092268.1-201ENST00000342691 405 ntBASIC0.06□□□□□ -2.4
SRP9P49458 SNORA63.3-201ENST00000362682 132 ntBASIC0.06□□□□□ -2.4
SRP9P49458 RNU4-67P-201ENST00000364569 141 ntBASIC0.06□□□□□ -2.4
SRP9P49458 Y_RNA.476-201ENST00000384347 108 ntBASIC0.06□□□□□ -2.4
SRP9P49458 MIR653-201ENST00000385279 96 ntBASIC0.06□□□□□ -2.4
SRP9P49458 AL034345.1-201ENST00000407768 123 ntBASIC0.06□□□□□ -2.4
SRP9P49458 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC0.06□□□□□ -2.4
SRP9P49458 RN7SKP200-201ENST00000410564 320 ntBASIC0.06□□□□□ -2.4
SRP9P49458 NFU1P2-201ENST00000448700 469 ntBASIC0.06□□□□□ -2.4
SRP9P49458 RNA5SP216-201ENST00000516111 123 ntBASIC0.06□□□□□ -2.4
SRP9P49458 RNU6-1069P-201ENST00000516612 133 ntBASIC0.06□□□□□ -2.4
SRP9P49458 AC123904.2-201ENST00000548059 300 ntBASIC0.06□□□□□ -2.4
SRP9P49458 SUB1P2-201ENST00000556401 297 ntBASIC0.06□□□□□ -2.4
SRP9P49458 AC023827.1-201ENST00000569247 97 ntBASIC0.06□□□□□ -2.4
SRP9P49458 AC022217.4-201ENST00000604389 163 ntBASIC0.06□□□□□ -2.4
SRP9P49458 MIR7111-201ENST00000619751 72 ntBASIC0.06□□□□□ -2.4
SRP9P49458 MIR8054-201ENST00000620877 86 ntBASIC0.06□□□□□ -2.4
SRP9P49458 AL513423.1-201ENST00000621695 132 ntBASIC0.06□□□□□ -2.4
SRP9P49458 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC0.06□□□□□ -2.4
SRP9P49458 AL445523.1-201ENST00000451184 1362 ntBASIC0.06□□□□□ -2.4
SRP9P49458 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.05□□□□□ -2.4
SRP9P49458 RNU6-560P-201ENST00000364007 108 ntBASIC0.05□□□□□ -2.4
SRP9P49458 RNU6-371P-201ENST00000364283 108 ntBASIC0.05□□□□□ -2.4
SRP9P49458 Y_RNA.287-201ENST00000364853 94 ntBASIC0.05□□□□□ -2.4
SRP9P49458 Y_RNA.330-201ENST00000365230 109 ntBASIC0.05□□□□□ -2.4
SRP9P49458 AL451046.2-201ENST00000403074 277 ntBASIC0.05□□□□□ -2.4
SRP9P49458 AC114491.1-201ENST00000416095 246 ntBASIC0.05□□□□□ -2.4
SRP9P49458 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
SRP9P49458 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.05□□□□□ -2.4
SRP9P49458 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.05□□□□□ -2.4
SRP9P49458 MTND3P25-201ENST00000509243 135 ntBASIC0.05□□□□□ -2.4
SRP9P49458 AC079395.1-201ENST00000510981 262 ntBASIC0.05□□□□□ -2.4
SRP9P49458 RNU6-917P-201ENST00000516294 104 ntBASIC0.05□□□□□ -2.4
SRP9P49458 AP002001.1-203ENST00000534002 267 ntBASIC0.05□□□□□ -2.4
SRP9P49458 AC090049.2-201ENST00000550377 109 ntBASIC0.05□□□□□ -2.4
SRP9P49458 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.05□□□□□ -2.4
SRP9P49458 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.05□□□□□ -2.4
SRP9P49458 AP000484.1-201ENST00000620067 1252 ntBASIC0.05□□□□□ -2.4
SRP9P49458 AC006001.4-201ENST00000622243 395 ntBASIC0.05□□□□□ -2.4
SRP9P49458 AL356596.1-201ENST00000624230 379 ntBASIC0.05□□□□□ -2.4
SRP9P49458 MIR330-201ENST00000362196 94 ntBASIC0.04□□□□□ -2.4
SRP9P49458 RNU6-222P-201ENST00000362438 107 ntBASIC0.04□□□□□ -2.4
SRP9P49458 Y_RNA.46-201ENST00000362695 102 ntBASIC0.04□□□□□ -2.4
SRP9P49458 RNU6-1327P-201ENST00000365302 105 ntBASIC0.04□□□□□ -2.4
SRP9P49458 MIR660-201ENST00000385235 97 ntBASIC0.04□□□□□ -2.4
SRP9P49458 EEF1A1P40-201ENST00000412883 573 ntBASIC0.04□□□□□ -2.4
SRP9P49458 AC000111.3-201ENST00000433478 193 ntBASIC0.04□□□□□ -2.4
SRP9P49458 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.04□□□□□ -2.4
SRP9P49458 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.04□□□□□ -2.4
SRP9P49458 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.04□□□□□ -2.4
SRP9P49458 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.04□□□□□ -2.4
SRP9P49458 AP003327.1-201ENST00000529684 127 ntBASIC0.04□□□□□ -2.4
SRP9P49458 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
SRP9P49458 AC005730.3-201ENST00000583067 366 ntBASIC0.04□□□□□ -2.4
SRP9P49458 AC072039.2-201ENST00000608883 439 ntBASIC0.04□□□□□ -2.4
SRP9P49458 AC091925.1-201ENST00000623204 462 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms