Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 RNU6-1093P-201ENST00000391194 107 ntBASIC2.08□□□□□ -2.08
LHX1P48742 RBMX2P4-201ENST00000441256 376 ntBASIC2.08□□□□□ -2.08
LHX1P48742 PRELID3BP1-201ENST00000457142 540 ntBASIC2.08□□□□□ -2.08
LHX1P48742 AC107032.1-201ENST00000485945 480 ntBASIC2.08□□□□□ -2.08
LHX1P48742 PRDX4P1-201ENST00000507189 574 ntBASIC2.08□□□□□ -2.08
LHX1P48742 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.08□□□□□ -2.08
LHX1P48742 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.08□□□□□ -2.08
LHX1P48742 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.08□□□□□ -2.08
LHX1P48742 AC005668.1-201ENST00000571142 476 ntBASIC2.08□□□□□ -2.08
LHX1P48742 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.08□□□□□ -2.08
LHX1P48742 AC009994.1-201ENST00000606889 253 ntBASIC2.08□□□□□ -2.08
LHX1P48742 MIR6128-201ENST00000615528 109 ntBASIC2.08□□□□□ -2.08
LHX1P48742 AC131280.1-202ENST00000624067 4211 ntBASIC2.08□□□□□ -2.08
LHX1P48742 SNORD50.1-201ENST00000362987 71 ntBASIC2.07□□□□□ -2.08
LHX1P48742 RNA5SP160-201ENST00000364866 120 ntBASIC2.07□□□□□ -2.08
LHX1P48742 SNORA51.11-201ENST00000384442 131 ntBASIC2.07□□□□□ -2.08
LHX1P48742 AL357139.1-201ENST00000407792 426 ntBASIC2.07□□□□□ -2.08
LHX1P48742 MIR1289-2-201ENST00000408360 111 ntBASIC2.07□□□□□ -2.08
LHX1P48742 SRIP3-201ENST00000413200 219 ntBASIC2.07□□□□□ -2.08
LHX1P48742 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.07□□□□□ -2.08
LHX1P48742 RPL21P111-201ENST00000418453 477 ntBASIC2.07□□□□□ -2.08
LHX1P48742 WARS2P1-201ENST00000429678 537 ntBASIC2.07□□□□□ -2.08
LHX1P48742 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.07□□□□□ -2.08
LHX1P48742 FTH1P25-201ENST00000447665 469 ntBASIC2.07□□□□□ -2.08
LHX1P48742 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.07□□□□□ -2.08
LHX1P48742 AC079354.2-201ENST00000453523 154 ntBASIC2.07□□□□□ -2.08
LHX1P48742 RPL23AP42-201ENST00000471152 471 ntBASIC2.07□□□□□ -2.08
LHX1P48742 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.07□□□□□ -2.08
LHX1P48742 AF186996.7-201ENST00000492781 209 ntBASIC2.07□□□□□ -2.08
LHX1P48742 AC090255.1-201ENST00000495779 349 ntBASIC2.07□□□□□ -2.08
LHX1P48742 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.07□□□□□ -2.08
LHX1P48742 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.07□□□□□ -2.08
LHX1P48742 MTND5P5-201ENST00000503764 376 ntBASIC2.07□□□□□ -2.08
LHX1P48742 AC005741.1-201ENST00000511094 432 ntBASIC2.07□□□□□ -2.08
LHX1P48742 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.07□□□□□ -2.08
LHX1P48742 AC090517.1-201ENST00000569307 266 ntBASIC2.07□□□□□ -2.08
LHX1P48742 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.07□□□□□ -2.08
LHX1P48742 MIR6715A-201ENST00000615929 79 ntBASIC2.07□□□□□ -2.08
LHX1P48742 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.07□□□□□ -2.08
LHX1P48742 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.07□□□□□ -2.08
LHX1P48742 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
LHX1P48742 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.06□□□□□ -2.08
LHX1P48742 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.06□□□□□ -2.08
LHX1P48742 MTND5P9-201ENST00000503854 1755 ntBASIC2.06□□□□□ -2.08
LHX1P48742 RNU6-1159P-201ENST00000362933 107 ntBASIC2.06□□□□□ -2.08
LHX1P48742 RNU6-234P-201ENST00000365229 104 ntBASIC2.06□□□□□ -2.08
LHX1P48742 U8.13-201ENST00000390842 128 ntBASIC2.06□□□□□ -2.08
LHX1P48742 SNORD23.1-201ENST00000408212 104 ntBASIC2.06□□□□□ -2.08
LHX1P48742 MIR548F5-201ENST00000408421 86 ntBASIC2.06□□□□□ -2.08
LHX1P48742 EIF4EP2-201ENST00000422816 654 ntBASIC2.06□□□□□ -2.08
LHX1P48742 HMGN2P38-201ENST00000423806 265 ntBASIC2.06□□□□□ -2.08
LHX1P48742 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.06□□□□□ -2.08
LHX1P48742 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.06□□□□□ -2.08
LHX1P48742 AC245102.2-201ENST00000448956 180 ntBASIC2.06□□□□□ -2.08
LHX1P48742 RPL23AP7-203ENST00000449021 469 ntBASIC2.06□□□□□ -2.08
LHX1P48742 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.06□□□□□ -2.08
LHX1P48742 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.06□□□□□ -2.08
LHX1P48742 AC087477.1-201ENST00000465747 340 ntBASIC2.06□□□□□ -2.08
LHX1P48742 AC116337.1-201ENST00000509680 687 ntBASIC2.06□□□□□ -2.08
LHX1P48742 RNU6-991P-201ENST00000516168 107 ntBASIC2.06□□□□□ -2.08
LHX1P48742 RNU7-30P-201ENST00000516835 62 ntBASIC2.06□□□□□ -2.08
LHX1P48742 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.06□□□□□ -2.08
LHX1P48742 RPS3AP23-202ENST00000574601 686 ntBASIC2.06□□□□□ -2.08
LHX1P48742 AC137590.2-201ENST00000619709 240 ntBASIC2.06□□□□□ -2.08
LHX1P48742 AC012640.5-201ENST00000623897 319 ntBASIC2.06□□□□□ -2.08
LHX1P48742 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.06□□□□□ -2.08
LHX1P48742 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.06□□□□□ -2.08
LHX1P48742 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
LHX1P48742 AL596028.1-201ENST00000326971 197 ntBASIC2.05□□□□□ -2.08
LHX1P48742 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
LHX1P48742 RNU6-845P-201ENST00000362578 103 ntBASIC2.05□□□□□ -2.08
LHX1P48742 SNORD115-3-201ENST00000363100 82 ntBASIC2.05□□□□□ -2.08
LHX1P48742 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
LHX1P48742 MIR583-201ENST00000384846 75 ntBASIC2.05□□□□□ -2.08
LHX1P48742 HMGN2P39-201ENST00000398005 273 ntBASIC2.05□□□□□ -2.08
LHX1P48742 MIR1262-201ENST00000408276 93 ntBASIC2.05□□□□□ -2.08
LHX1P48742 MIR548K-201ENST00000408406 116 ntBASIC2.05□□□□□ -2.08
LHX1P48742 RNU2-41P-201ENST00000410991 178 ntBASIC2.05□□□□□ -2.08
LHX1P48742 AC074085.1-201ENST00000413598 418 ntBASIC2.05□□□□□ -2.08
LHX1P48742 USP9YP30-201ENST00000430729 455 ntBASIC2.05□□□□□ -2.08
LHX1P48742 IPO7P1-201ENST00000442031 636 ntBASIC2.05□□□□□ -2.08
LHX1P48742 AC107399.1-201ENST00000451226 265 ntBASIC2.05□□□□□ -2.08
LHX1P48742 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.05□□□□□ -2.08
LHX1P48742 RPL23AP75-201ENST00000491601 451 ntBASIC2.05□□□□□ -2.08
LHX1P48742 AC093259.1-201ENST00000509755 300 ntBASIC2.05□□□□□ -2.08
LHX1P48742 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.05□□□□□ -2.08
LHX1P48742 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.05□□□□□ -2.08
LHX1P48742 RNA5SP490-201ENST00000517141 136 ntBASIC2.05□□□□□ -2.08
LHX1P48742 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.05□□□□□ -2.08
LHX1P48742 MIR4273-201ENST00000582824 84 ntBASIC2.05□□□□□ -2.08
LHX1P48742 SCARNA4-201ENST00000629045 128 ntBASIC2.05□□□□□ -2.08
LHX1P48742 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.05□□□□□ -2.08
LHX1P48742 AC099654.14-201ENST00000638599 341 ntBASIC2.05□□□□□ -2.08
LHX1P48742 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
LHX1P48742 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.04□□□□□ -2.08
LHX1P48742 AL356292.1-201ENST00000283110 373 ntBASIC2.04□□□□□ -2.08
LHX1P48742 SNORD14D-201ENST00000384390 87 ntBASIC2.04□□□□□ -2.08
LHX1P48742 SNORA40.19-201ENST00000390846 128 ntBASIC2.04□□□□□ -2.08
LHX1P48742 RPS26P42-201ENST00000413485 326 ntBASIC2.04□□□□□ -2.08
LHX1P48742 AL358453.1-201ENST00000422522 250 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms