Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.15□□□□□ -2.23
BRCA1P38398 RNU1-98P-201ENST00000458992 160 ntBASIC1.15□□□□□ -2.23
BRCA1P38398 SNRPGP7-201ENST00000469016 106 ntBASIC1.15□□□□□ -2.23
BRCA1P38398 RNU6-415P-201ENST00000516252 97 ntBASIC1.15□□□□□ -2.23
BRCA1P38398 AC103996.1-201ENST00000555468 102 ntBASIC1.15□□□□□ -2.23
BRCA1P38398 MTATP6P24-201ENST00000576835 677 ntBASIC1.15□□□□□ -2.23
BRCA1P38398 AL121992.2-201ENST00000606262 256 ntBASIC1.15□□□□□ -2.23
BRCA1P38398 AC104073.3-201ENST00000610942 955 ntBASIC1.15□□□□□ -2.23
BRCA1P38398 U2.17-201ENST00000611454 95 ntBASIC1.15□□□□□ -2.23
BRCA1P38398 AL136221.1-201ENST00000621449 509 ntBASIC1.15□□□□□ -2.23
BRCA1P38398 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
BRCA1P38398 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.14□□□□□ -2.23
BRCA1P38398 Y_RNA.258-201ENST00000364613 105 ntBASIC1.14□□□□□ -2.23
BRCA1P38398 SNORD31B-201ENST00000364977 69 ntBASIC1.14□□□□□ -2.23
BRCA1P38398 RNU4-66P-201ENST00000365199 138 ntBASIC1.14□□□□□ -2.23
BRCA1P38398 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.14□□□□□ -2.23
BRCA1P38398 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
BRCA1P38398 BX295541.1-201ENST00000417774 250 ntBASIC1.14□□□□□ -2.23
BRCA1P38398 RPS27P16-201ENST00000425758 201 ntBASIC1.14□□□□□ -2.23
BRCA1P38398 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.14□□□□□ -2.23
BRCA1P38398 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.14□□□□□ -2.23
BRCA1P38398 AL162395.1-201ENST00000457882 422 ntBASIC1.14□□□□□ -2.23
BRCA1P38398 AC007547.1-201ENST00000462177 490 ntBASIC1.14□□□□□ -2.23
BRCA1P38398 MTCO2P6-201ENST00000463134 685 ntBASIC1.14□□□□□ -2.23
BRCA1P38398 AC025465.3-201ENST00000510570 311 ntBASIC1.14□□□□□ -2.23
BRCA1P38398 RNU6-1220P-201ENST00000517126 108 ntBASIC1.14□□□□□ -2.23
BRCA1P38398 AC091304.9-201ENST00000612091 226 ntBASIC1.14□□□□□ -2.23
BRCA1P38398 AC007742.2-201ENST00000618226 398 ntBASIC1.14□□□□□ -2.23
BRCA1P38398 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
BRCA1P38398 AC018630.2-201ENST00000534866 2403 ntBASIC1.14□□□□□ -2.23
BRCA1P38398 FGF7P2-201ENST00000332473 296 ntBASIC1.14□□□□□ -2.23
BRCA1P38398 SNORA72.2-201ENST00000365028 127 ntBASIC1.14□□□□□ -2.23
BRCA1P38398 RNU6-190P-201ENST00000384154 102 ntBASIC1.14□□□□□ -2.23
BRCA1P38398 RNU6-45P-201ENST00000384471 107 ntBASIC1.14□□□□□ -2.23
BRCA1P38398 RNU6-1127P-201ENST00000384580 107 ntBASIC1.14□□□□□ -2.23
BRCA1P38398 RNU6-606P-201ENST00000384721 111 ntBASIC1.14□□□□□ -2.23
BRCA1P38398 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.14□□□□□ -2.23
BRCA1P38398 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
BRCA1P38398 CDK8P2-201ENST00000415020 547 ntBASIC1.14□□□□□ -2.23
BRCA1P38398 ARL5AP1-201ENST00000418991 388 ntBASIC1.14□□□□□ -2.23
BRCA1P38398 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.14□□□□□ -2.23
BRCA1P38398 SNORA18.6-201ENST00000516792 115 ntBASIC1.14□□□□□ -2.23
BRCA1P38398 MTND4P7-201ENST00000523876 130 ntBASIC1.14□□□□□ -2.23
BRCA1P38398 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.14□□□□□ -2.23
BRCA1P38398 AC016256.1-201ENST00000547971 354 ntBASIC1.14□□□□□ -2.23
BRCA1P38398 ZNF321P-202ENST00000550843 495 ntBASIC1.14□□□□□ -2.23
BRCA1P38398 AC093424.1-201ENST00000604999 338 ntBASIC1.14□□□□□ -2.23
BRCA1P38398 AC064807.4-201ENST00000607201 407 ntBASIC1.14□□□□□ -2.23
BRCA1P38398 AC136475.10-201ENST00000620253 385 ntBASIC1.14□□□□□ -2.23
BRCA1P38398 AC091812.1-201ENST00000432235 1948 ntBASIC1.13□□□□□ -2.23
BRCA1P38398 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
BRCA1P38398 AC100821.1-201ENST00000523153 2479 ntBASIC1.13□□□□□ -2.23
BRCA1P38398 SNORA72.3-201ENST00000365074 132 ntBASIC1.13□□□□□ -2.23
BRCA1P38398 MIR194-1-201ENST00000384892 85 ntBASIC1.13□□□□□ -2.23
BRCA1P38398 RN7SKP61-201ENST00000410642 295 ntBASIC1.13□□□□□ -2.23
BRCA1P38398 RNU7-14P-201ENST00000459331 62 ntBASIC1.13□□□□□ -2.23
BRCA1P38398 AC087683.1-201ENST00000591187 441 ntBASIC1.13□□□□□ -2.23
BRCA1P38398 AC009994.1-201ENST00000606889 253 ntBASIC1.13□□□□□ -2.23
BRCA1P38398 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.13□□□□□ -2.23
BRCA1P38398 MTND4P14-201ENST00000435799 1354 ntBASIC1.13□□□□□ -2.23
BRCA1P38398 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.12□□□□□ -2.23
BRCA1P38398 Y_RNA.67-201ENST00000362870 100 ntBASIC1.12□□□□□ -2.23
BRCA1P38398 RNU6-74P-201ENST00000384235 107 ntBASIC1.12□□□□□ -2.23
BRCA1P38398 RNU6-541P-201ENST00000384709 110 ntBASIC1.12□□□□□ -2.23
BRCA1P38398 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
BRCA1P38398 AL591704.2-201ENST00000421658 181 ntBASIC1.12□□□□□ -2.23
BRCA1P38398 SDAD1P3-201ENST00000427380 333 ntBASIC1.12□□□□□ -2.23
BRCA1P38398 AL669831.1-202ENST00000428504 417 ntBASIC1.12□□□□□ -2.23
BRCA1P38398 C8orf59P1-201ENST00000429930 303 ntBASIC1.12□□□□□ -2.23
BRCA1P38398 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.12□□□□□ -2.23
BRCA1P38398 GTF2IP13-201ENST00000438487 386 ntBASIC1.12□□□□□ -2.23
BRCA1P38398 JTBP1-201ENST00000441314 247 ntBASIC1.12□□□□□ -2.23
BRCA1P38398 RPS29P15-201ENST00000458329 171 ntBASIC1.12□□□□□ -2.23
BRCA1P38398 RNU7-138P-201ENST00000459479 64 ntBASIC1.12□□□□□ -2.23
BRCA1P38398 MTCO3P38-201ENST00000468910 766 ntBASIC1.12□□□□□ -2.23
BRCA1P38398 AC010486.2-201ENST00000505572 483 ntBASIC1.12□□□□□ -2.23
BRCA1P38398 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.12□□□□□ -2.23
BRCA1P38398 SUMO2P18-201ENST00000518873 252 ntBASIC1.12□□□□□ -2.23
BRCA1P38398 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.12□□□□□ -2.23
BRCA1P38398 RAB11AP2-201ENST00000545905 639 ntBASIC1.12□□□□□ -2.23
BRCA1P38398 MIR3913-1-201ENST00000577744 102 ntBASIC1.12□□□□□ -2.23
BRCA1P38398 FGF7P1-201ENST00000582820 288 ntBASIC1.12□□□□□ -2.23
BRCA1P38398 AC078795.3-201ENST00000602913 472 ntBASIC1.12□□□□□ -2.23
BRCA1P38398 AC064872.1-201ENST00000604823 1072 ntBASIC1.12□□□□□ -2.23
BRCA1P38398 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.12□□□□□ -2.23
BRCA1P38398 AL590240.4-201ENST00000616908 390 ntBASIC1.12□□□□□ -2.23
BRCA1P38398 MIR6513-201ENST00000621188 64 ntBASIC1.12□□□□□ -2.23
BRCA1P38398 OR5AK4P-201ENST00000635912 903 ntBASIC1.12□□□□□ -2.23
BRCA1P38398 RNU6-23P-201ENST00000363283 107 ntBASIC1.12□□□□□ -2.23
BRCA1P38398 MIR520A-201ENST00000384862 85 ntBASIC1.12□□□□□ -2.23
BRCA1P38398 MIR597-201ENST00000384968 97 ntBASIC1.12□□□□□ -2.23
BRCA1P38398 RNU6-955P-201ENST00000410497 104 ntBASIC1.12□□□□□ -2.23
BRCA1P38398 AC010975.2-201ENST00000427781 588 ntBASIC1.12□□□□□ -2.23
BRCA1P38398 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC1.12□□□□□ -2.23
BRCA1P38398 MTCO2P3-201ENST00000442543 421 ntBASIC1.12□□□□□ -2.23
BRCA1P38398 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC1.12□□□□□ -2.23
BRCA1P38398 ZNF736P8Y-201ENST00000451913 669 ntBASIC1.12□□□□□ -2.23
BRCA1P38398 U8.21-201ENST00000459536 136 ntBASIC1.12□□□□□ -2.23
BRCA1P38398 RPL26P26-201ENST00000480251 434 ntBASIC1.12□□□□□ -2.23
BRCA1P38398 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms