Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 MIR337-201ENST00000362281 93 ntBASIC-0.03□□□□□ -2.41
CKS2P33552 SNORD44.1-201ENST00000363202 61 ntBASIC-0.03□□□□□ -2.41
CKS2P33552 RNY4P16-201ENST00000364768 94 ntBASIC-0.03□□□□□ -2.41
CKS2P33552 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC-0.03□□□□□ -2.41
CKS2P33552 MTCYBP10-201ENST00000424905 650 ntBASIC-0.03□□□□□ -2.41
CKS2P33552 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC-0.03□□□□□ -2.41
CKS2P33552 AL133396.1-201ENST00000432048 687 ntBASIC-0.03□□□□□ -2.41
CKS2P33552 AC104332.1-201ENST00000440471 797 ntBASIC-0.03□□□□□ -2.41
CKS2P33552 MTND3P25-201ENST00000509243 135 ntBASIC-0.03□□□□□ -2.41
CKS2P33552 RNU6-948P-201ENST00000516374 107 ntBASIC-0.03□□□□□ -2.41
CKS2P33552 AC107934.1-201ENST00000522215 217 ntBASIC-0.03□□□□□ -2.41
CKS2P33552 AC013828.2-201ENST00000532487 235 ntBASIC-0.03□□□□□ -2.41
CKS2P33552 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC-0.03□□□□□ -2.41
CKS2P33552 AC123904.2-201ENST00000548059 300 ntBASIC-0.03□□□□□ -2.41
CKS2P33552 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC-0.03□□□□□ -2.41
CKS2P33552 AC009712.1-201ENST00000564938 316 ntBASIC-0.03□□□□□ -2.41
CKS2P33552 AC023827.1-201ENST00000569247 97 ntBASIC-0.03□□□□□ -2.41
CKS2P33552 MTND1P15-201ENST00000579262 949 ntBASIC-0.03□□□□□ -2.41
CKS2P33552 AC073539.2-201ENST00000597113 165 ntBASIC-0.03□□□□□ -2.41
CKS2P33552 SNRPGP20-201ENST00000604477 205 ntBASIC-0.03□□□□□ -2.41
CKS2P33552 Z99289.3-201ENST00000605586 594 ntBASIC-0.03□□□□□ -2.41
CKS2P33552 AL031775.1-201ENST00000607014 887 ntBASIC-0.03□□□□□ -2.41
CKS2P33552 AC024060.1-201ENST00000607052 494 ntBASIC-0.03□□□□□ -2.41
CKS2P33552 AC072039.2-201ENST00000608883 439 ntBASIC-0.03□□□□□ -2.41
CKS2P33552 RNU6-552P-201ENST00000362869 119 ntBASIC-0.04□□□□□ -2.42
CKS2P33552 SNORA2.2-201ENST00000365473 135 ntBASIC-0.04□□□□□ -2.42
CKS2P33552 RNU6-975P-201ENST00000384296 105 ntBASIC-0.04□□□□□ -2.42
CKS2P33552 RNA5SP219-201ENST00000390940 113 ntBASIC-0.04□□□□□ -2.42
CKS2P33552 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC-0.04□□□□□ -2.42
CKS2P33552 RNA5SP504-201ENST00000410676 117 ntBASIC-0.04□□□□□ -2.42
CKS2P33552 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC-0.04□□□□□ -2.42
CKS2P33552 AC245047.3-201ENST00000429428 127 ntBASIC-0.04□□□□□ -2.42
CKS2P33552 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC-0.04□□□□□ -2.42
CKS2P33552 RPS20P10-201ENST00000451209 253 ntBASIC-0.04□□□□□ -2.42
CKS2P33552 MTCO3P27-201ENST00000514397 196 ntBASIC-0.04□□□□□ -2.42
CKS2P33552 AC022868.1-201ENST00000517767 391 ntBASIC-0.04□□□□□ -2.42
CKS2P33552 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC-0.04□□□□□ -2.42
CKS2P33552 MTATP6P25-201ENST00000574491 261 ntBASIC-0.04□□□□□ -2.42
CKS2P33552 MIR4753-201ENST00000585119 83 ntBASIC-0.04□□□□□ -2.42
CKS2P33552 AC004223.2-201ENST00000590309 544 ntBASIC-0.04□□□□□ -2.42
CKS2P33552 AC146944.4-201ENST00000602697 718 ntBASIC-0.04□□□□□ -2.42
CKS2P33552 RAC1P9-201ENST00000604990 392 ntBASIC-0.04□□□□□ -2.42
CKS2P33552 RNU6-88P-201ENST00000606801 100 ntBASIC-0.04□□□□□ -2.42
CKS2P33552 AL139286.2-201ENST00000606838 396 ntBASIC-0.04□□□□□ -2.42
CKS2P33552 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC-0.04□□□□□ -2.42
CKS2P33552 AC006001.4-201ENST00000622243 395 ntBASIC-0.04□□□□□ -2.42
CKS2P33552 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC-0.05□□□□□ -2.42
CKS2P33552 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.05□□□□□ -2.42
CKS2P33552 RNU6-562P-201ENST00000362731 107 ntBASIC-0.05□□□□□ -2.42
CKS2P33552 RNU6-336P-201ENST00000364891 107 ntBASIC-0.05□□□□□ -2.42
CKS2P33552 MRPL42P3-201ENST00000401492 326 ntBASIC-0.05□□□□□ -2.42
CKS2P33552 RNU6-607P-201ENST00000411283 108 ntBASIC-0.05□□□□□ -2.42
CKS2P33552 AC114491.1-201ENST00000416095 246 ntBASIC-0.05□□□□□ -2.42
CKS2P33552 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC-0.05□□□□□ -2.42
CKS2P33552 AL445305.1-201ENST00000432577 575 ntBASIC-0.05□□□□□ -2.42
CKS2P33552 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC-0.05□□□□□ -2.42
CKS2P33552 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC-0.05□□□□□ -2.42
CKS2P33552 RBBP4P6-201ENST00000508098 202 ntBASIC-0.05□□□□□ -2.42
CKS2P33552 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC-0.05□□□□□ -2.42
CKS2P33552 RNU6-377P-201ENST00000515965 102 ntBASIC-0.05□□□□□ -2.42
CKS2P33552 RNU7-51P-201ENST00000516560 62 ntBASIC-0.05□□□□□ -2.42
CKS2P33552 AC068587.4-201ENST00000533893 186 ntBASIC-0.05□□□□□ -2.42
CKS2P33552 MIR151B-201ENST00000584249 96 ntBASIC-0.05□□□□□ -2.42
CKS2P33552 MIR924-201ENST00000638017 53 ntBASIC-0.05□□□□□ -2.42
CKS2P33552 AC073343.1-201ENST00000328239 651 ntBASIC-0.06□□□□□ -2.42
CKS2P33552 Y_RNA.330-201ENST00000365230 109 ntBASIC-0.06□□□□□ -2.42
CKS2P33552 RNU6-723P-201ENST00000383973 107 ntBASIC-0.06□□□□□ -2.42
CKS2P33552 MIR549A-201ENST00000385268 96 ntBASIC-0.06□□□□□ -2.42
CKS2P33552 CALM2P3-201ENST00000400429 449 ntBASIC-0.06□□□□□ -2.42
CKS2P33552 MIR208B-201ENST00000401172 77 ntBASIC-0.06□□□□□ -2.42
CKS2P33552 MIR936-201ENST00000401264 98 ntBASIC-0.06□□□□□ -2.42
CKS2P33552 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.06□□□□□ -2.42
CKS2P33552 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC-0.06□□□□□ -2.42
CKS2P33552 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC-0.06□□□□□ -2.42
CKS2P33552 AL356583.2-201ENST00000426536 280 ntBASIC-0.06□□□□□ -2.42
CKS2P33552 MTND4P15-201ENST00000437913 1033 ntBASIC-0.06□□□□□ -2.42
CKS2P33552 AC005002.2-201ENST00000438228 269 ntBASIC-0.06□□□□□ -2.42
CKS2P33552 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC-0.06□□□□□ -2.42
CKS2P33552 MTCO1P19-201ENST00000443487 500 ntBASIC-0.06□□□□□ -2.42
CKS2P33552 SNRPGP12-201ENST00000449481 213 ntBASIC-0.06□□□□□ -2.42
CKS2P33552 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC-0.06□□□□□ -2.42
CKS2P33552 OR9P1P-201ENST00000496431 281 ntBASIC-0.06□□□□□ -2.42
CKS2P33552 RNU6-1053P-201ENST00000515930 101 ntBASIC-0.06□□□□□ -2.42
CKS2P33552 RNU1-142P-201ENST00000516682 145 ntBASIC-0.06□□□□□ -2.42
CKS2P33552 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC-0.06□□□□□ -2.42
CKS2P33552 AC016256.1-201ENST00000547971 354 ntBASIC-0.06□□□□□ -2.42
CKS2P33552 MIR5692A1-201ENST00000580523 69 ntBASIC-0.06□□□□□ -2.42
CKS2P33552 Z99497.2-201ENST00000603634 310 ntBASIC-0.06□□□□□ -2.42
CKS2P33552 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC-0.06□□□□□ -2.42
CKS2P33552 AP000568.1-201ENST00000282964 442 ntBASIC-0.07□□□□□ -2.42
CKS2P33552 RNU6-433P-201ENST00000363216 104 ntBASIC-0.07□□□□□ -2.42
CKS2P33552 SNORA36A-201ENST00000384221 132 ntBASIC-0.07□□□□□ -2.42
CKS2P33552 RNU6-793P-201ENST00000384233 104 ntBASIC-0.07□□□□□ -2.42
CKS2P33552 AC016909.1-201ENST00000415916 166 ntBASIC-0.07□□□□□ -2.42
CKS2P33552 RPL31P35-201ENST00000431058 377 ntBASIC-0.07□□□□□ -2.42
CKS2P33552 SNAP23P1-201ENST00000433229 246 ntBASIC-0.07□□□□□ -2.42
CKS2P33552 LINC01399-202ENST00000458450 244 ntBASIC-0.07□□□□□ -2.42
CKS2P33552 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC-0.07□□□□□ -2.42
CKS2P33552 AC016632.1-201ENST00000503994 196 ntBASIC-0.07□□□□□ -2.42
CKS2P33552 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC-0.07□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms