Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 AL358794.1-201ENST00000445689 381 ntBASIC0.37□□□□□ -2.35
HOXA6P31267 AL606662.1-201ENST00000445763 553 ntBASIC0.37□□□□□ -2.35
HOXA6P31267 RPL39P39-201ENST00000455840 151 ntBASIC0.37□□□□□ -2.35
HOXA6P31267 AP000797.1-201ENST00000478870 387 ntBASIC0.37□□□□□ -2.35
HOXA6P31267 AC011406.1-201ENST00000512440 370 ntBASIC0.37□□□□□ -2.35
HOXA6P31267 RNU6-123P-201ENST00000516163 102 ntBASIC0.37□□□□□ -2.35
HOXA6P31267 RNU6-1098P-201ENST00000516772 96 ntBASIC0.37□□□□□ -2.35
HOXA6P31267 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.37□□□□□ -2.35
HOXA6P31267 AC036111.3-201ENST00000526389 112 ntBASIC0.37□□□□□ -2.35
HOXA6P31267 MTATP6P15-201ENST00000527233 835 ntBASIC0.37□□□□□ -2.35
HOXA6P31267 MIR5692A1-201ENST00000580523 69 ntBASIC0.37□□□□□ -2.35
HOXA6P31267 MIR4514-201ENST00000581410 57 ntBASIC0.37□□□□□ -2.35
HOXA6P31267 MTND3P19-201ENST00000603825 345 ntBASIC0.37□□□□□ -2.35
HOXA6P31267 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.37□□□□□ -2.35
HOXA6P31267 Y_RNA.280-201ENST00000364765 112 ntBASIC0.36□□□□□ -2.35
HOXA6P31267 RNU6-1335P-201ENST00000365426 107 ntBASIC0.36□□□□□ -2.35
HOXA6P31267 RNU6-945P-201ENST00000383947 107 ntBASIC0.36□□□□□ -2.35
HOXA6P31267 RNU6-1257P-201ENST00000384625 110 ntBASIC0.36□□□□□ -2.35
HOXA6P31267 AL590135.1-201ENST00000422215 156 ntBASIC0.36□□□□□ -2.35
HOXA6P31267 AC019205.3-201ENST00000424573 156 ntBASIC0.36□□□□□ -2.35
HOXA6P31267 AC244670.1-201ENST00000436879 112 ntBASIC0.36□□□□□ -2.35
HOXA6P31267 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC0.36□□□□□ -2.35
HOXA6P31267 MTCO3P18-201ENST00000440206 761 ntBASIC0.36□□□□□ -2.35
HOXA6P31267 AC016700.2-201ENST00000446011 156 ntBASIC0.36□□□□□ -2.35
HOXA6P31267 HMGN1P10-201ENST00000474557 553 ntBASIC0.36□□□□□ -2.35
HOXA6P31267 AC015911.1-201ENST00000495111 156 ntBASIC0.36□□□□□ -2.35
HOXA6P31267 MTCO3P7-201ENST00000510008 774 ntBASIC0.36□□□□□ -2.35
HOXA6P31267 AC112206.4-201ENST00000515142 405 ntBASIC0.36□□□□□ -2.35
HOXA6P31267 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC0.36□□□□□ -2.35
HOXA6P31267 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.36□□□□□ -2.35
HOXA6P31267 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.36□□□□□ -2.35
HOXA6P31267 AC112187.2-201ENST00000604345 283 ntBASIC0.36□□□□□ -2.35
HOXA6P31267 AL139022.2-201ENST00000606934 443 ntBASIC0.36□□□□□ -2.35
HOXA6P31267 AC136475.10-201ENST00000620253 385 ntBASIC0.36□□□□□ -2.35
HOXA6P31267 AC006927.4-201ENST00000639187 543 ntBASIC0.36□□□□□ -2.35
HOXA6P31267 RNU1-76P-201ENST00000362903 159 ntBASIC0.35□□□□□ -2.35
HOXA6P31267 Y_RNA.363-201ENST00000365529 113 ntBASIC0.35□□□□□ -2.35
HOXA6P31267 Y_RNA.458-201ENST00000384240 102 ntBASIC0.35□□□□□ -2.35
HOXA6P31267 RNU6-43P-201ENST00000384302 107 ntBASIC0.35□□□□□ -2.35
HOXA6P31267 EEF1A1P40-201ENST00000412883 573 ntBASIC0.35□□□□□ -2.35
HOXA6P31267 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.35□□□□□ -2.35
HOXA6P31267 AC078809.1-201ENST00000427601 140 ntBASIC0.35□□□□□ -2.35
HOXA6P31267 AL163973.1-201ENST00000484753 577 ntBASIC0.35□□□□□ -2.35
HOXA6P31267 AC091435.1-201ENST00000505442 584 ntBASIC0.35□□□□□ -2.35
HOXA6P31267 SNORA19.3-201ENST00000516165 130 ntBASIC0.35□□□□□ -2.35
HOXA6P31267 RNU6-922P-201ENST00000516753 99 ntBASIC0.35□□□□□ -2.35
HOXA6P31267 EIF4A1P12-201ENST00000551910 141 ntBASIC0.35□□□□□ -2.35
HOXA6P31267 AC090888.2-201ENST00000559765 1144 ntBASIC0.35□□□□□ -2.35
HOXA6P31267 AL606834.3-201ENST00000602615 496 ntBASIC0.35□□□□□ -2.35
HOXA6P31267 AL021368.1-201ENST00000607490 540 ntBASIC0.35□□□□□ -2.35
HOXA6P31267 PCGEM1.1-201ENST00000613431 131 ntBASIC0.35□□□□□ -2.35
HOXA6P31267 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.35□□□□□ -2.35
HOXA6P31267 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.35□□□□□ -2.35
HOXA6P31267 SNORD56.2-201ENST00000363242 71 ntBASIC0.34□□□□□ -2.36
HOXA6P31267 SNORD116.1-201ENST00000365628 92 ntBASIC0.34□□□□□ -2.36
HOXA6P31267 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.34□□□□□ -2.36
HOXA6P31267 MTATP6P20-201ENST00000414147 562 ntBASIC0.34□□□□□ -2.36
HOXA6P31267 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.34□□□□□ -2.36
HOXA6P31267 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.34□□□□□ -2.36
HOXA6P31267 AC060773.1-201ENST00000421698 310 ntBASIC0.34□□□□□ -2.36
HOXA6P31267 AC010975.2-201ENST00000427781 588 ntBASIC0.34□□□□□ -2.36
HOXA6P31267 EEF1A1P39-201ENST00000440791 250 ntBASIC0.34□□□□□ -2.36
HOXA6P31267 RPEP5-201ENST00000441137 268 ntBASIC0.34□□□□□ -2.36
HOXA6P31267 AL606517.2-201ENST00000442855 241 ntBASIC0.34□□□□□ -2.36
HOXA6P31267 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC0.34□□□□□ -2.36
HOXA6P31267 AL133217.1-201ENST00000450980 425 ntBASIC0.34□□□□□ -2.36
HOXA6P31267 AC007547.1-201ENST00000462177 490 ntBASIC0.34□□□□□ -2.36
HOXA6P31267 AC098869.1-201ENST00000481627 292 ntBASIC0.34□□□□□ -2.36
HOXA6P31267 RPS23P5-201ENST00000495419 428 ntBASIC0.34□□□□□ -2.36
HOXA6P31267 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.34□□□□□ -2.36
HOXA6P31267 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC0.34□□□□□ -2.36
HOXA6P31267 RNU6-276P-201ENST00000516114 96 ntBASIC0.34□□□□□ -2.36
HOXA6P31267 RNU6-1146P-201ENST00000516282 102 ntBASIC0.34□□□□□ -2.36
HOXA6P31267 RNU2-34P-201ENST00000516534 121 ntBASIC0.34□□□□□ -2.36
HOXA6P31267 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC0.34□□□□□ -2.36
HOXA6P31267 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC0.34□□□□□ -2.36
HOXA6P31267 MIR5695-201ENST00000579717 85 ntBASIC0.34□□□□□ -2.36
HOXA6P31267 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.34□□□□□ -2.36
HOXA6P31267 MIR3118-1-201ENST00000581787 76 ntBASIC0.34□□□□□ -2.36
HOXA6P31267 AL356157.2-201ENST00000605122 111 ntBASIC0.34□□□□□ -2.36
HOXA6P31267 CTHRC1P1-201ENST00000605383 469 ntBASIC0.34□□□□□ -2.36
HOXA6P31267 AL360219.1-201ENST00000610230 366 ntBASIC0.34□□□□□ -2.36
HOXA6P31267 MIR338-201ENST00000636369 67 ntBASIC0.34□□□□□ -2.36
HOXA6P31267 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC0.34□□□□□ -2.36
HOXA6P31267 CASC19-280ENST00000642102 1351 ntBASIC0.33□□□□□ -2.36
HOXA6P31267 AC073544.1-201ENST00000600110 1595 ntBASIC0.33□□□□□ -2.36
HOXA6P31267 AC092268.1-201ENST00000342691 405 ntBASIC0.33□□□□□ -2.36
HOXA6P31267 SNORA26.3-201ENST00000391119 136 ntBASIC0.33□□□□□ -2.36
HOXA6P31267 AF228730.1-201ENST00000397972 663 ntBASIC0.33□□□□□ -2.36
HOXA6P31267 RNU2-72P-201ENST00000411175 163 ntBASIC0.33□□□□□ -2.36
HOXA6P31267 RNU6-293P-201ENST00000411259 106 ntBASIC0.33□□□□□ -2.36
HOXA6P31267 AC114491.1-201ENST00000416095 246 ntBASIC0.33□□□□□ -2.36
HOXA6P31267 C1DP2-201ENST00000418167 426 ntBASIC0.33□□□□□ -2.36
HOXA6P31267 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
HOXA6P31267 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.33□□□□□ -2.36
HOXA6P31267 ZNF736P1Y-201ENST00000440402 1276 ntBASIC0.33□□□□□ -2.36
HOXA6P31267 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.33□□□□□ -2.36
HOXA6P31267 RNU7-90P-201ENST00000459216 62 ntBASIC0.33□□□□□ -2.36
HOXA6P31267 SRRM1P2-201ENST00000464531 1192 ntBASIC0.33□□□□□ -2.36
HOXA6P31267 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms