Protein–RNA interactions for Protein: P27694

RPA1, Replication protein A 70 kDa DNA-binding subunit, humanhuman

Predictions only

Length 616 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1P27694 AL357078.3-201ENST00000607528 618 ntBASIC1.86□□□□□ -2.11
RPA1P27694 SNORD98-201ENST00000636377 67 ntBASIC1.86□□□□□ -2.11
RPA1P27694 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
RPA1P27694 RNU4-15P-201ENST00000362613 141 ntBASIC1.85□□□□□ -2.11
RPA1P27694 Y_RNA.86-201ENST00000363020 111 ntBASIC1.85□□□□□ -2.11
RPA1P27694 RNU6-26P-201ENST00000383985 107 ntBASIC1.85□□□□□ -2.11
RPA1P27694 RNU6-43P-201ENST00000384302 107 ntBASIC1.85□□□□□ -2.11
RPA1P27694 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
RPA1P27694 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
RPA1P27694 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.85□□□□□ -2.11
RPA1P27694 MTND1P2-201ENST00000430604 821 ntBASIC1.85□□□□□ -2.11
RPA1P27694 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.85□□□□□ -2.11
RPA1P27694 MTCO3P18-201ENST00000440206 761 ntBASIC1.85□□□□□ -2.11
RPA1P27694 AMD1P1-201ENST00000457220 922 ntBASIC1.85□□□□□ -2.11
RPA1P27694 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.85□□□□□ -2.11
RPA1P27694 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.85□□□□□ -2.11
RPA1P27694 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.85□□□□□ -2.11
RPA1P27694 AC005741.1-201ENST00000511094 432 ntBASIC1.85□□□□□ -2.11
RPA1P27694 RNU6-567P-201ENST00000516746 107 ntBASIC1.85□□□□□ -2.11
RPA1P27694 RNU6-273P-201ENST00000516937 96 ntBASIC1.85□□□□□ -2.11
RPA1P27694 SNORA44.1-201ENST00000517031 108 ntBASIC1.85□□□□□ -2.11
RPA1P27694 AC087441.2-201ENST00000529141 262 ntBASIC1.85□□□□□ -2.11
RPA1P27694 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.85□□□□□ -2.11
RPA1P27694 RPL17P51-201ENST00000605218 238 ntBASIC1.85□□□□□ -2.11
RPA1P27694 MIR7843-201ENST00000622274 79 ntBASIC1.85□□□□□ -2.11
RPA1P27694 AC130454.1-201ENST00000622948 401 ntBASIC1.85□□□□□ -2.11
RPA1P27694 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.85□□□□□ -2.11
RPA1P27694 AC121333.1-201ENST00000567488 2709 ntBASIC1.85□□□□□ -2.11
RPA1P27694 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
RPA1P27694 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
RPA1P27694 RNU6-82P-201ENST00000363970 107 ntBASIC1.84□□□□□ -2.11
RPA1P27694 RNU6-743P-201ENST00000364151 106 ntBASIC1.84□□□□□ -2.11
RPA1P27694 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.84□□□□□ -2.11
RPA1P27694 SNORA36A-201ENST00000384221 132 ntBASIC1.84□□□□□ -2.11
RPA1P27694 MIR450B-201ENST00000401182 78 ntBASIC1.84□□□□□ -2.11
RPA1P27694 MTCYBP2-201ENST00000407745 171 ntBASIC1.84□□□□□ -2.11
RPA1P27694 AL133396.1-201ENST00000432048 687 ntBASIC1.84□□□□□ -2.11
RPA1P27694 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.84□□□□□ -2.11
RPA1P27694 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.84□□□□□ -2.11
RPA1P27694 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.84□□□□□ -2.11
RPA1P27694 MTND1P11-201ENST00000456661 876 ntBASIC1.84□□□□□ -2.11
RPA1P27694 HMGN2P23-201ENST00000456759 269 ntBASIC1.84□□□□□ -2.11
RPA1P27694 snoU13.23-201ENST00000458863 104 ntBASIC1.84□□□□□ -2.11
RPA1P27694 RNU7-187P-201ENST00000458985 68 ntBASIC1.84□□□□□ -2.11
RPA1P27694 AC145146.1-201ENST00000496370 254 ntBASIC1.84□□□□□ -2.11
RPA1P27694 AC008628.2-201ENST00000502605 298 ntBASIC1.84□□□□□ -2.11
RPA1P27694 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.84□□□□□ -2.11
RPA1P27694 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.84□□□□□ -2.11
RPA1P27694 SNORA19.2-201ENST00000516013 114 ntBASIC1.84□□□□□ -2.11
RPA1P27694 RNU6-1314P-201ENST00000517139 104 ntBASIC1.84□□□□□ -2.11
RPA1P27694 DEFB122-202ENST00000569013 197 ntBASIC1.84□□□□□ -2.11
RPA1P27694 MIR3923-201ENST00000579521 83 ntBASIC1.84□□□□□ -2.11
RPA1P27694 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.84□□□□□ -2.11
RPA1P27694 Y_RNA.100-201ENST00000363141 102 ntBASIC1.83□□□□□ -2.12
RPA1P27694 Y_RNA.303-201ENST00000364998 94 ntBASIC1.83□□□□□ -2.12
RPA1P27694 RNU6-877P-201ENST00000383868 107 ntBASIC1.83□□□□□ -2.12
RPA1P27694 SNORA32.2-201ENST00000384049 122 ntBASIC1.83□□□□□ -2.12
RPA1P27694 RNU6-1106P-201ENST00000390845 107 ntBASIC1.83□□□□□ -2.12
RPA1P27694 SNORA48.1-201ENST00000390879 135 ntBASIC1.83□□□□□ -2.12
RPA1P27694 SNORA26.3-201ENST00000391119 136 ntBASIC1.83□□□□□ -2.12
RPA1P27694 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.83□□□□□ -2.12
RPA1P27694 RNU1-131P-201ENST00000458943 161 ntBASIC1.83□□□□□ -2.12
RPA1P27694 RPS29P27-201ENST00000463711 170 ntBASIC1.83□□□□□ -2.12
RPA1P27694 TRBVA-201ENST00000498804 316 ntBASIC1.83□□□□□ -2.12
RPA1P27694 AC016632.1-201ENST00000503994 196 ntBASIC1.83□□□□□ -2.12
RPA1P27694 RNU6-548P-201ENST00000517083 115 ntBASIC1.83□□□□□ -2.12
RPA1P27694 GNAI2P1-201ENST00000541815 315 ntBASIC1.83□□□□□ -2.12
RPA1P27694 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.83□□□□□ -2.12
RPA1P27694 MIR3122-201ENST00000577243 73 ntBASIC1.83□□□□□ -2.12
RPA1P27694 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
RPA1P27694 AC006504.8-201ENST00000621046 635 ntBASIC1.83□□□□□ -2.12
RPA1P27694 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
RPA1P27694 RNU6-23P-201ENST00000363283 107 ntBASIC1.82□□□□□ -2.12
RPA1P27694 RNU6-1317P-201ENST00000364582 104 ntBASIC1.82□□□□□ -2.12
RPA1P27694 SNORD32A-201ENST00000364805 84 ntBASIC1.82□□□□□ -2.12
RPA1P27694 RNA5SP190-201ENST00000365222 118 ntBASIC1.82□□□□□ -2.12
RPA1P27694 RNU6-1329P-201ENST00000365664 107 ntBASIC1.82□□□□□ -2.12
RPA1P27694 Y_RNA.473-201ENST00000384333 102 ntBASIC1.82□□□□□ -2.12
RPA1P27694 RNA5SP501-201ENST00000410990 112 ntBASIC1.82□□□□□ -2.12
RPA1P27694 VN1R36P-201ENST00000414936 291 ntBASIC1.82□□□□□ -2.12
RPA1P27694 SNRPEP10-201ENST00000420249 274 ntBASIC1.82□□□□□ -2.12
RPA1P27694 AL590135.1-201ENST00000422215 156 ntBASIC1.82□□□□□ -2.12
RPA1P27694 AC019205.3-201ENST00000424573 156 ntBASIC1.82□□□□□ -2.12
RPA1P27694 RPL23AP95-201ENST00000426806 265 ntBASIC1.82□□□□□ -2.12
RPA1P27694 SNAP23P1-201ENST00000433229 246 ntBASIC1.82□□□□□ -2.12
RPA1P27694 USP9YP28-201ENST00000435142 589 ntBASIC1.82□□□□□ -2.12
RPA1P27694 AC016700.2-201ENST00000446011 156 ntBASIC1.82□□□□□ -2.12
RPA1P27694 RNA5SP57-201ENST00000459463 123 ntBASIC1.82□□□□□ -2.12
RPA1P27694 RNU7-138P-201ENST00000459479 64 ntBASIC1.82□□□□□ -2.12
RPA1P27694 SNRPGP7-201ENST00000469016 106 ntBASIC1.82□□□□□ -2.12
RPA1P27694 AC015911.1-201ENST00000495111 156 ntBASIC1.82□□□□□ -2.12
RPA1P27694 AC091885.1-201ENST00000506658 268 ntBASIC1.82□□□□□ -2.12
RPA1P27694 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.82□□□□□ -2.12
RPA1P27694 RNU6-358P-201ENST00000516564 75 ntBASIC1.82□□□□□ -2.12
RPA1P27694 AP005660.1-201ENST00000522972 293 ntBASIC1.82□□□□□ -2.12
RPA1P27694 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.82□□□□□ -2.12
RPA1P27694 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.82□□□□□ -2.12
RPA1P27694 AC010900.2-201ENST00000604508 210 ntBASIC1.82□□□□□ -2.12
RPA1P27694 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.82□□□□□ -2.12
RPA1P27694 AL450472.1-202ENST00000637286 180 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms