Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 AC068792.1-201ENST00000621354 417 ntBASIC2.08□□□□□ -2.08
BDNFP23560 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
BDNFP23560 OR4G1P-203ENST00000641984 1631 ntBASIC2.08□□□□□ -2.08
BDNFP23560 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.08□□□□□ -2.08
BDNFP23560 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.07□□□□□ -2.08
BDNFP23560 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
BDNFP23560 RNU5B-2P-201ENST00000363036 113 ntBASIC2.07□□□□□ -2.08
BDNFP23560 RNU6-112P-201ENST00000363599 104 ntBASIC2.07□□□□□ -2.08
BDNFP23560 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
BDNFP23560 MIR450B-201ENST00000401182 78 ntBASIC2.07□□□□□ -2.08
BDNFP23560 MIR1283-1-201ENST00000408494 87 ntBASIC2.07□□□□□ -2.08
BDNFP23560 UBE2V1P8-201ENST00000437166 265 ntBASIC2.07□□□□□ -2.08
BDNFP23560 Z83846.1-201ENST00000446798 265 ntBASIC2.07□□□□□ -2.08
BDNFP23560 AMD1P1-201ENST00000457220 922 ntBASIC2.07□□□□□ -2.08
BDNFP23560 snoU13.6-201ENST00000458785 104 ntBASIC2.07□□□□□ -2.08
BDNFP23560 snoU13.9-201ENST00000458927 103 ntBASIC2.07□□□□□ -2.08
BDNFP23560 RNU6-717P-201ENST00000459076 104 ntBASIC2.07□□□□□ -2.08
BDNFP23560 AC025033.1-201ENST00000463883 194 ntBASIC2.07□□□□□ -2.08
BDNFP23560 AC010409.1-201ENST00000487382 476 ntBASIC2.07□□□□□ -2.08
BDNFP23560 RNU6-1281P-201ENST00000516223 105 ntBASIC2.07□□□□□ -2.08
BDNFP23560 RNU6-948P-201ENST00000516374 107 ntBASIC2.07□□□□□ -2.08
BDNFP23560 MIR5006-201ENST00000583027 110 ntBASIC2.07□□□□□ -2.08
BDNFP23560 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
BDNFP23560 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
BDNFP23560 RNU6-1019P-201ENST00000364424 107 ntBASIC2.06□□□□□ -2.08
BDNFP23560 SNORA12.2-201ENST00000391040 156 ntBASIC2.06□□□□□ -2.08
BDNFP23560 AC019129.1-201ENST00000403786 261 ntBASIC2.06□□□□□ -2.08
BDNFP23560 MIR1267-201ENST00000408723 78 ntBASIC2.06□□□□□ -2.08
BDNFP23560 RNU6-325P-201ENST00000411132 105 ntBASIC2.06□□□□□ -2.08
BDNFP23560 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.06□□□□□ -2.08
BDNFP23560 AL645568.3-201ENST00000433683 316 ntBASIC2.06□□□□□ -2.08
BDNFP23560 NDUFA5P4-201ENST00000436704 385 ntBASIC2.06□□□□□ -2.08
BDNFP23560 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.06□□□□□ -2.08
BDNFP23560 OR2AQ1P-201ENST00000451972 200 ntBASIC2.06□□□□□ -2.08
BDNFP23560 AC010531.2-201ENST00000465012 153 ntBASIC2.06□□□□□ -2.08
BDNFP23560 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.06□□□□□ -2.08
BDNFP23560 AC116337.1-201ENST00000509680 687 ntBASIC2.06□□□□□ -2.08
BDNFP23560 AC092436.3-201ENST00000511788 257 ntBASIC2.06□□□□□ -2.08
BDNFP23560 RNU6-1332P-201ENST00000516666 104 ntBASIC2.06□□□□□ -2.08
BDNFP23560 RNU6-856P-201ENST00000516959 98 ntBASIC2.06□□□□□ -2.08
BDNFP23560 MIR4422-201ENST00000581938 83 ntBASIC2.06□□□□□ -2.08
BDNFP23560 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC2.06□□□□□ -2.08
BDNFP23560 AP000907.4-201ENST00000604143 237 ntBASIC2.06□□□□□ -2.08
BDNFP23560 ZNF355P-201ENST00000427301 3216 ntBASIC2.05□□□□□ -2.08
BDNFP23560 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
BDNFP23560 MIR340-201ENST00000362125 95 ntBASIC2.05□□□□□ -2.08
BDNFP23560 MIR424-201ENST00000362227 98 ntBASIC2.05□□□□□ -2.08
BDNFP23560 RNU6-877P-201ENST00000383868 107 ntBASIC2.05□□□□□ -2.08
BDNFP23560 RNU6-784P-201ENST00000384330 106 ntBASIC2.05□□□□□ -2.08
BDNFP23560 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
BDNFP23560 U8.13-201ENST00000390842 128 ntBASIC2.05□□□□□ -2.08
BDNFP23560 RNU6-360P-201ENST00000390944 104 ntBASIC2.05□□□□□ -2.08
BDNFP23560 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.05□□□□□ -2.08
BDNFP23560 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.05□□□□□ -2.08
BDNFP23560 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC2.05□□□□□ -2.08
BDNFP23560 MTCO3P29-201ENST00000432119 779 ntBASIC2.05□□□□□ -2.08
BDNFP23560 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.05□□□□□ -2.08
BDNFP23560 AC091435.1-201ENST00000505442 584 ntBASIC2.05□□□□□ -2.08
BDNFP23560 RNU6-1146P-201ENST00000516282 102 ntBASIC2.05□□□□□ -2.08
BDNFP23560 RNA5SP364-201ENST00000516938 78 ntBASIC2.05□□□□□ -2.08
BDNFP23560 AC110588.1-201ENST00000559699 137 ntBASIC2.05□□□□□ -2.08
BDNFP23560 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.05□□□□□ -2.08
BDNFP23560 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.05□□□□□ -2.08
BDNFP23560 CTHRC1P1-201ENST00000605383 469 ntBASIC2.05□□□□□ -2.08
BDNFP23560 RNU6-89P-201ENST00000606519 100 ntBASIC2.05□□□□□ -2.08
BDNFP23560 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.05□□□□□ -2.08
BDNFP23560 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
BDNFP23560 SNORD113-7-201ENST00000363762 77 ntBASIC2.04□□□□□ -2.08
BDNFP23560 SNORA72.2-201ENST00000365028 127 ntBASIC2.04□□□□□ -2.08
BDNFP23560 RNA5SP138-201ENST00000365098 114 ntBASIC2.04□□□□□ -2.08
BDNFP23560 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.04□□□□□ -2.08
BDNFP23560 RNU2-20P-201ENST00000410425 191 ntBASIC2.04□□□□□ -2.08
BDNFP23560 AL445685.2-201ENST00000422551 342 ntBASIC2.04□□□□□ -2.08
BDNFP23560 AL591806.2-201ENST00000433122 173 ntBASIC2.04□□□□□ -2.08
BDNFP23560 AC004386.2-201ENST00000441858 148 ntBASIC2.04□□□□□ -2.08
BDNFP23560 AC009237.7-201ENST00000447357 229 ntBASIC2.04□□□□□ -2.08
BDNFP23560 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.04□□□□□ -2.08
BDNFP23560 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.04□□□□□ -2.08
BDNFP23560 MRPS36P4-201ENST00000534436 298 ntBASIC2.04□□□□□ -2.08
BDNFP23560 CPDP1-201ENST00000579660 283 ntBASIC2.04□□□□□ -2.08
BDNFP23560 AC010615.1-201ENST00000594254 1764 ntBASIC2.04□□□□□ -2.08
BDNFP23560 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
BDNFP23560 AC022513.1-201ENST00000624512 117 ntBASIC2.04□□□□□ -2.08
BDNFP23560 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
BDNFP23560 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.03□□□□□ -2.08
BDNFP23560 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
BDNFP23560 MTND4P1-201ENST00000457501 1466 ntBASIC2.03□□□□□ -2.08
BDNFP23560 RNU6-545P-201ENST00000362681 104 ntBASIC2.03□□□□□ -2.08
BDNFP23560 Y_RNA.67-201ENST00000362870 100 ntBASIC2.03□□□□□ -2.08
BDNFP23560 RNU1-96P-201ENST00000364163 162 ntBASIC2.03□□□□□ -2.08
BDNFP23560 RNU4-42P-201ENST00000364738 142 ntBASIC2.03□□□□□ -2.08
BDNFP23560 Y_RNA.559-201ENST00000384686 107 ntBASIC2.03□□□□□ -2.08
BDNFP23560 MIR583-201ENST00000384846 75 ntBASIC2.03□□□□□ -2.08
BDNFP23560 MIR515-2-201ENST00000384883 83 ntBASIC2.03□□□□□ -2.08
BDNFP23560 MIR515-1-201ENST00000384884 83 ntBASIC2.03□□□□□ -2.08
BDNFP23560 MIR764-201ENST00000390811 85 ntBASIC2.03□□□□□ -2.08
BDNFP23560 SNORA40.18-201ENST00000391200 128 ntBASIC2.03□□□□□ -2.08
BDNFP23560 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.03□□□□□ -2.08
BDNFP23560 USP9YP14-201ENST00000430663 563 ntBASIC2.03□□□□□ -2.08
BDNFP23560 MTND3P21-201ENST00000433774 331 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms