Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.43□□□□□ -2.02
PCNAP12004 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.43□□□□□ -2.02
PCNAP12004 AL080274.1-201ENST00000605565 220 ntBASIC2.43□□□□□ -2.02
PCNAP12004 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.43□□□□□ -2.02
PCNAP12004 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
PCNAP12004 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
PCNAP12004 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.42□□□□□ -2.02
PCNAP12004 Y_RNA.132-201ENST00000363421 102 ntBASIC2.42□□□□□ -2.02
PCNAP12004 Y_RNA.431-201ENST00000384086 102 ntBASIC2.42□□□□□ -2.02
PCNAP12004 RNU6-700P-201ENST00000391043 107 ntBASIC2.42□□□□□ -2.02
PCNAP12004 RPS20P15-201ENST00000412792 311 ntBASIC2.42□□□□□ -2.02
PCNAP12004 AC003685.2-201ENST00000422795 395 ntBASIC2.42□□□□□ -2.02
PCNAP12004 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.42□□□□□ -2.02
PCNAP12004 AL161788.1-201ENST00000441805 169 ntBASIC2.42□□□□□ -2.02
PCNAP12004 EEF1B2P7-201ENST00000451177 676 ntBASIC2.42□□□□□ -2.02
PCNAP12004 RN7SKP210-201ENST00000459176 261 ntBASIC2.42□□□□□ -2.02
PCNAP12004 RNU7-175P-201ENST00000515915 61 ntBASIC2.42□□□□□ -2.02
PCNAP12004 RNU6-1170P-201ENST00000515974 106 ntBASIC2.42□□□□□ -2.02
PCNAP12004 RNU6-567P-201ENST00000516746 107 ntBASIC2.42□□□□□ -2.02
PCNAP12004 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.42□□□□□ -2.02
PCNAP12004 AC016727.2-201ENST00000603988 621 ntBASIC2.42□□□□□ -2.02
PCNAP12004 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
PCNAP12004 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
PCNAP12004 Y_RNA.5-201ENST00000362334 102 ntBASIC2.41□□□□□ -2.02
PCNAP12004 Y_RNA.11-201ENST00000362375 109 ntBASIC2.41□□□□□ -2.02
PCNAP12004 SNORD42.2-201ENST00000365570 69 ntBASIC2.41□□□□□ -2.02
PCNAP12004 Y_RNA.496-201ENST00000384444 101 ntBASIC2.41□□□□□ -2.02
PCNAP12004 MIR29B2-201ENST00000385055 81 ntBASIC2.41□□□□□ -2.02
PCNAP12004 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
PCNAP12004 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.41□□□□□ -2.02
PCNAP12004 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.41□□□□□ -2.02
PCNAP12004 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.41□□□□□ -2.02
PCNAP12004 AL590556.1-201ENST00000423231 483 ntBASIC2.41□□□□□ -2.02
PCNAP12004 MTND4P28-201ENST00000426217 387 ntBASIC2.41□□□□□ -2.02
PCNAP12004 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.41□□□□□ -2.02
PCNAP12004 AC007677.1-201ENST00000445757 515 ntBASIC2.41□□□□□ -2.02
PCNAP12004 IFNA11P-201ENST00000446352 526 ntBASIC2.41□□□□□ -2.02
PCNAP12004 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.41□□□□□ -2.02
PCNAP12004 RNU7-87P-201ENST00000459343 62 ntBASIC2.41□□□□□ -2.02
PCNAP12004 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.41□□□□□ -2.02
PCNAP12004 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
PCNAP12004 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.41□□□□□ -2.02
PCNAP12004 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.41□□□□□ -2.02
PCNAP12004 Y_RNA.661-201ENST00000516003 99 ntBASIC2.41□□□□□ -2.02
PCNAP12004 Y_RNA.701-201ENST00000516812 110 ntBASIC2.41□□□□□ -2.02
PCNAP12004 DEFB131C-201ENST00000528817 165 ntBASIC2.41□□□□□ -2.02
PCNAP12004 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
PCNAP12004 UBL5P4-201ENST00000562584 236 ntBASIC2.41□□□□□ -2.02
PCNAP12004 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.41□□□□□ -2.02
PCNAP12004 AC104581.2-201ENST00000572227 430 ntBASIC2.41□□□□□ -2.02
PCNAP12004 MIR5694-201ENST00000581190 76 ntBASIC2.41□□□□□ -2.02
PCNAP12004 AL355297.2-201ENST00000604792 129 ntBASIC2.41□□□□□ -2.02
PCNAP12004 AL137847.3-201ENST00000611521 109 ntBASIC2.41□□□□□ -2.02
PCNAP12004 AC090971.5-201ENST00000621102 293 ntBASIC2.41□□□□□ -2.02
PCNAP12004 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
PCNAP12004 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
PCNAP12004 AC007336.1-201ENST00000576365 3828 ntBASIC2.41□□□□□ -2.02
PCNAP12004 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
PCNAP12004 AC062016.1-201ENST00000355719 319 ntBASIC2.4□□□□□ -2.03
PCNAP12004 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
PCNAP12004 Y_RNA.106-201ENST00000363189 100 ntBASIC2.4□□□□□ -2.03
PCNAP12004 U3.9-201ENST00000363823 204 ntBASIC2.4□□□□□ -2.03
PCNAP12004 Y_RNA.197-201ENST00000364004 102 ntBASIC2.4□□□□□ -2.03
PCNAP12004 RNU6-17P-201ENST00000384245 107 ntBASIC2.4□□□□□ -2.03
PCNAP12004 RNU6-18P-201ENST00000384527 107 ntBASIC2.4□□□□□ -2.03
PCNAP12004 RNU6-1156P-201ENST00000410365 100 ntBASIC2.4□□□□□ -2.03
PCNAP12004 RNA5SP184-201ENST00000411071 108 ntBASIC2.4□□□□□ -2.03
PCNAP12004 MTCYBP10-201ENST00000424905 650 ntBASIC2.4□□□□□ -2.03
PCNAP12004 MTCO2P12-201ENST00000427426 682 ntBASIC2.4□□□□□ -2.03
PCNAP12004 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.4□□□□□ -2.03
PCNAP12004 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.4□□□□□ -2.03
PCNAP12004 U8.22-201ENST00000459141 133 ntBASIC2.4□□□□□ -2.03
PCNAP12004 AP000870.1-201ENST00000472927 406 ntBASIC2.4□□□□□ -2.03
PCNAP12004 Y_RNA.706-201ENST00000516933 99 ntBASIC2.4□□□□□ -2.03
PCNAP12004 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.4□□□□□ -2.03
PCNAP12004 PRELID2P1-201ENST00000552837 301 ntBASIC2.4□□□□□ -2.03
PCNAP12004 AC027288.2-201ENST00000553028 243 ntBASIC2.4□□□□□ -2.03
PCNAP12004 SUB1P3-201ENST00000564581 315 ntBASIC2.4□□□□□ -2.03
PCNAP12004 7SK.7-201ENST00000603504 247 ntBASIC2.4□□□□□ -2.03
PCNAP12004 RMST_6.1-201ENST00000611980 203 ntBASIC2.4□□□□□ -2.03
PCNAP12004 AC005520.5-201ENST00000613926 164 ntBASIC2.4□□□□□ -2.03
PCNAP12004 AC008121.3-201ENST00000618726 433 ntBASIC2.4□□□□□ -2.03
PCNAP12004 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
PCNAP12004 Y_RNA.31-201ENST00000362574 102 ntBASIC2.39□□□□□ -2.03
PCNAP12004 RNU6-1159P-201ENST00000362933 107 ntBASIC2.39□□□□□ -2.03
PCNAP12004 RNU6-490P-201ENST00000362985 107 ntBASIC2.39□□□□□ -2.03
PCNAP12004 SNORD115-32-201ENST00000364079 82 ntBASIC2.39□□□□□ -2.03
PCNAP12004 SNORD32B-201ENST00000364460 84 ntBASIC2.39□□□□□ -2.03
PCNAP12004 RNU6-474P-201ENST00000384243 107 ntBASIC2.39□□□□□ -2.03
PCNAP12004 MIR95-201ENST00000385072 81 ntBASIC2.39□□□□□ -2.03
PCNAP12004 MIR153-2-201ENST00000385225 87 ntBASIC2.39□□□□□ -2.03
PCNAP12004 MIR190B-201ENST00000401119 79 ntBASIC2.39□□□□□ -2.03
PCNAP12004 AL355497.1-201ENST00000406262 551 ntBASIC2.39□□□□□ -2.03
PCNAP12004 RNU2-63P-201ENST00000410792 194 ntBASIC2.39□□□□□ -2.03
PCNAP12004 AL354751.2-201ENST00000415471 210 ntBASIC2.39□□□□□ -2.03
PCNAP12004 MTND1P14-201ENST00000427400 950 ntBASIC2.39□□□□□ -2.03
PCNAP12004 AC096644.2-201ENST00000429278 159 ntBASIC2.39□□□□□ -2.03
PCNAP12004 RPS12P2-201ENST00000439728 269 ntBASIC2.39□□□□□ -2.03
PCNAP12004 RNU7-169P-201ENST00000459456 61 ntBASIC2.39□□□□□ -2.03
PCNAP12004 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 169.2 ms