Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 RPL9P9-202ENST00000466501 579 ntBASIC1.25□□□□□ -2.21
CD74P04233 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.25□□□□□ -2.21
CD74P04233 AC005741.1-201ENST00000511094 432 ntBASIC1.25□□□□□ -2.21
CD74P04233 AC025465.4-201ENST00000513422 638 ntBASIC1.25□□□□□ -2.21
CD74P04233 SNORA19.2-201ENST00000516013 114 ntBASIC1.25□□□□□ -2.21
CD74P04233 SNORA25.15-201ENST00000516487 89 ntBASIC1.25□□□□□ -2.21
CD74P04233 RNU5F-4P-201ENST00000516581 114 ntBASIC1.25□□□□□ -2.21
CD74P04233 RNU6-1069P-201ENST00000516612 133 ntBASIC1.25□□□□□ -2.21
CD74P04233 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.25□□□□□ -2.21
CD74P04233 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.25□□□□□ -2.21
CD74P04233 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.25□□□□□ -2.21
CD74P04233 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.25□□□□□ -2.21
CD74P04233 MIR5692C1-201ENST00000585309 91 ntBASIC1.25□□□□□ -2.21
CD74P04233 MIR8074-201ENST00000615081 81 ntBASIC1.25□□□□□ -2.21
CD74P04233 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.25□□□□□ -2.21
CD74P04233 LINC02555-201ENST00000563933 1951 ntBASIC1.25□□□□□ -2.21
CD74P04233 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.24□□□□□ -2.21
CD74P04233 RNU4-75P-201ENST00000364621 146 ntBASIC1.24□□□□□ -2.21
CD74P04233 RNA5SP190-201ENST00000365222 118 ntBASIC1.24□□□□□ -2.21
CD74P04233 Y_RNA.372-201ENST00000365599 102 ntBASIC1.24□□□□□ -2.21
CD74P04233 Y_RNA.481-201ENST00000384373 102 ntBASIC1.24□□□□□ -2.21
CD74P04233 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
CD74P04233 SNORA48.1-201ENST00000390879 135 ntBASIC1.24□□□□□ -2.21
CD74P04233 SNORA26.3-201ENST00000391119 136 ntBASIC1.24□□□□□ -2.21
CD74P04233 RNU6-1093P-201ENST00000391194 107 ntBASIC1.24□□□□□ -2.21
CD74P04233 AL627390.1-201ENST00000396055 340 ntBASIC1.24□□□□□ -2.21
CD74P04233 RNU6-1068P-201ENST00000410958 103 ntBASIC1.24□□□□□ -2.21
CD74P04233 AC132942.1-201ENST00000486753 483 ntBASIC1.24□□□□□ -2.21
CD74P04233 AC083904.1-201ENST00000487828 231 ntBASIC1.24□□□□□ -2.21
CD74P04233 Y_RNA.654-201ENST00000497848 106 ntBASIC1.24□□□□□ -2.21
CD74P04233 AC093534.1-201ENST00000504977 132 ntBASIC1.24□□□□□ -2.21
CD74P04233 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.24□□□□□ -2.21
CD74P04233 RNVU1-2-201ENST00000516326 135 ntBASIC1.24□□□□□ -2.21
CD74P04233 RNU6-1332P-201ENST00000516666 104 ntBASIC1.24□□□□□ -2.21
CD74P04233 RNU6-1098P-201ENST00000516772 96 ntBASIC1.24□□□□□ -2.21
CD74P04233 RNU6-835P-201ENST00000516974 104 ntBASIC1.24□□□□□ -2.21
CD74P04233 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.24□□□□□ -2.21
CD74P04233 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.24□□□□□ -2.21
CD74P04233 AC021231.3-201ENST00000558497 370 ntBASIC1.24□□□□□ -2.21
CD74P04233 CYP4A27P-201ENST00000567218 190 ntBASIC1.24□□□□□ -2.21
CD74P04233 AC090517.1-201ENST00000569307 266 ntBASIC1.24□□□□□ -2.21
CD74P04233 AC016727.1-205ENST00000605437 569 ntBASIC1.24□□□□□ -2.21
CD74P04233 PRR13P7-201ENST00000605538 430 ntBASIC1.24□□□□□ -2.21
CD74P04233 AC245008.1-201ENST00000608123 476 ntBASIC1.24□□□□□ -2.21
CD74P04233 AC073534.2-201ENST00000620377 381 ntBASIC1.24□□□□□ -2.21
CD74P04233 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
CD74P04233 RNU1-62P-201ENST00000362599 164 ntBASIC1.23□□□□□ -2.21
CD74P04233 RNU6-227P-201ENST00000362865 103 ntBASIC1.23□□□□□ -2.21
CD74P04233 Y_RNA.140-201ENST00000363474 103 ntBASIC1.23□□□□□ -2.21
CD74P04233 RNU6-82P-201ENST00000363970 107 ntBASIC1.23□□□□□ -2.21
CD74P04233 RNU6-1329P-201ENST00000365664 107 ntBASIC1.23□□□□□ -2.21
CD74P04233 SNORA67.5-201ENST00000391036 107 ntBASIC1.23□□□□□ -2.21
CD74P04233 RNU1-78P-201ENST00000391248 165 ntBASIC1.23□□□□□ -2.21
CD74P04233 RNU6-648P-201ENST00000410190 107 ntBASIC1.23□□□□□ -2.21
CD74P04233 RNU2-16P-201ENST00000410712 136 ntBASIC1.23□□□□□ -2.21
CD74P04233 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.23□□□□□ -2.21
CD74P04233 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.23□□□□□ -2.21
CD74P04233 NCOR1P3-201ENST00000420479 303 ntBASIC1.23□□□□□ -2.21
CD74P04233 AC012306.1-201ENST00000423267 114 ntBASIC1.23□□□□□ -2.21
CD74P04233 AC139712.2-201ENST00000424302 339 ntBASIC1.23□□□□□ -2.21
CD74P04233 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.23□□□□□ -2.21
CD74P04233 RPS29P27-201ENST00000463711 170 ntBASIC1.23□□□□□ -2.21
CD74P04233 AC130509.1-201ENST00000464158 433 ntBASIC1.23□□□□□ -2.21
CD74P04233 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.23□□□□□ -2.21
CD74P04233 AC092436.3-201ENST00000511788 257 ntBASIC1.23□□□□□ -2.21
CD74P04233 RNU6-567P-201ENST00000516746 107 ntBASIC1.23□□□□□ -2.21
CD74P04233 SNORD60.2-201ENST00000516883 86 ntBASIC1.23□□□□□ -2.21
CD74P04233 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.23□□□□□ -2.21
CD74P04233 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.23□□□□□ -2.21
CD74P04233 EIF4A1P12-201ENST00000551910 141 ntBASIC1.23□□□□□ -2.21
CD74P04233 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.23□□□□□ -2.21
CD74P04233 MIR3169-201ENST00000578032 83 ntBASIC1.23□□□□□ -2.21
CD74P04233 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.23□□□□□ -2.21
CD74P04233 AP001485.1-201ENST00000604799 199 ntBASIC1.23□□□□□ -2.21
CD74P04233 AC004492.1-201ENST00000607036 742 ntBASIC1.23□□□□□ -2.21
CD74P04233 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.23□□□□□ -2.21
CD74P04233 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.23□□□□□ -2.21
CD74P04233 AL359880.1-201ENST00000621879 266 ntBASIC1.23□□□□□ -2.21
CD74P04233 FER-210ENST00000628534 558 ntTSL 5 BASIC1.23□□□□□ -2.21
CD74P04233 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.23□□□□□ -2.21
CD74P04233 Y_RNA.123-201ENST00000363338 102 ntBASIC1.22□□□□□ -2.21
CD74P04233 Y_RNA.332-201ENST00000365271 113 ntBASIC1.22□□□□□ -2.21
CD74P04233 Y_RNA.373-201ENST00000365600 103 ntBASIC1.22□□□□□ -2.21
CD74P04233 SNORA32.2-201ENST00000384049 122 ntBASIC1.22□□□□□ -2.21
CD74P04233 RNU6-483P-201ENST00000384088 108 ntBASIC1.22□□□□□ -2.21
CD74P04233 RNU6-1026P-201ENST00000384465 108 ntBASIC1.22□□□□□ -2.21
CD74P04233 MIR517C-201ENST00000385103 95 ntBASIC1.22□□□□□ -2.21
CD74P04233 SNORA12.2-201ENST00000391040 156 ntBASIC1.22□□□□□ -2.21
CD74P04233 SNORA17.3-201ENST00000391159 129 ntBASIC1.22□□□□□ -2.21
CD74P04233 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.22□□□□□ -2.21
CD74P04233 AC108667.1-201ENST00000428618 249 ntBASIC1.22□□□□□ -2.21
CD74P04233 DLGAP5P1-201ENST00000430307 464 ntBASIC1.22□□□□□ -2.21
CD74P04233 AL035666.1-201ENST00000446195 348 ntBASIC1.22□□□□□ -2.21
CD74P04233 AC245517.4-201ENST00000448601 281 ntBASIC1.22□□□□□ -2.21
CD74P04233 SNORD13-201ENST00000459299 104 ntBASIC1.22□□□□□ -2.21
CD74P04233 RNU6-1208P-201ENST00000459588 107 ntBASIC1.22□□□□□ -2.21
CD74P04233 TOMM22P6-201ENST00000465035 409 ntBASIC1.22□□□□□ -2.21
CD74P04233 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.22□□□□□ -2.21
CD74P04233 AC025465.3-201ENST00000510570 311 ntBASIC1.22□□□□□ -2.21
CD74P04233 RNU6-1281P-201ENST00000516223 105 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms