Protein–RNA interactions for Protein: P04049

RAF1, RAF proto-oncogene serine/threonine-protein kinase, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1P04049 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.2□□□□□ -2.06
RAF1P04049 HSPE1P4-201ENST00000550617 308 ntBASIC2.2□□□□□ -2.06
RAF1P04049 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.2□□□□□ -2.06
RAF1P04049 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.2□□□□□ -2.06
RAF1P04049 AC005899.2-201ENST00000584353 90 ntBASIC2.2□□□□□ -2.06
RAF1P04049 AL356055.1-201ENST00000602528 446 ntBASIC2.2□□□□□ -2.06
RAF1P04049 AL080274.1-201ENST00000605565 220 ntBASIC2.2□□□□□ -2.06
RAF1P04049 AC005014.2-201ENST00000607795 599 ntBASIC2.2□□□□□ -2.06
RAF1P04049 AC133104.2-201ENST00000615272 193 ntBASIC2.2□□□□□ -2.06
RAF1P04049 AC090517.3-201ENST00000625170 141 ntBASIC2.2□□□□□ -2.06
RAF1P04049 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.2□□□□□ -2.06
RAF1P04049 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.2□□□□□ -2.06
RAF1P04049 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
RAF1P04049 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.2□□□□□ -2.06
RAF1P04049 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
RAF1P04049 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.19□□□□□ -2.06
RAF1P04049 MIR369-201ENST00000362155 70 ntBASIC2.19□□□□□ -2.06
RAF1P04049 RNA5SP240-201ENST00000365355 128 ntBASIC2.19□□□□□ -2.06
RAF1P04049 RNU6-1040P-201ENST00000383974 107 ntBASIC2.19□□□□□ -2.06
RAF1P04049 AL354751.2-201ENST00000415471 210 ntBASIC2.19□□□□□ -2.06
RAF1P04049 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.19□□□□□ -2.06
RAF1P04049 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.19□□□□□ -2.06
RAF1P04049 AIMP1P2-201ENST00000425294 312 ntBASIC2.19□□□□□ -2.06
RAF1P04049 AL353997.1-201ENST00000432936 108 ntBASIC2.19□□□□□ -2.06
RAF1P04049 AC244670.1-201ENST00000436879 112 ntBASIC2.19□□□□□ -2.06
RAF1P04049 AL161788.1-201ENST00000441805 169 ntBASIC2.19□□□□□ -2.06
RAF1P04049 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.19□□□□□ -2.06
RAF1P04049 MIR2053-201ENST00000459295 91 ntBASIC2.19□□□□□ -2.06
RAF1P04049 AL121594.1-201ENST00000475906 575 ntBASIC2.19□□□□□ -2.06
RAF1P04049 RPL30P1-201ENST00000488676 339 ntBASIC2.19□□□□□ -2.06
RAF1P04049 AC104564.1-201ENST00000493028 407 ntBASIC2.19□□□□□ -2.06
RAF1P04049 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.19□□□□□ -2.06
RAF1P04049 RNU6-470P-201ENST00000515954 104 ntBASIC2.19□□□□□ -2.06
RAF1P04049 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.19□□□□□ -2.06
RAF1P04049 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.19□□□□□ -2.06
RAF1P04049 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.19□□□□□ -2.06
RAF1P04049 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.19□□□□□ -2.06
RAF1P04049 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.19□□□□□ -2.06
RAF1P04049 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
RAF1P04049 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.19□□□□□ -2.06
RAF1P04049 AL670379.2-201ENST00000604983 252 ntBASIC2.19□□□□□ -2.06
RAF1P04049 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.19□□□□□ -2.06
RAF1P04049 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
RAF1P04049 RNU6-1210P-201ENST00000363775 107 ntBASIC2.18□□□□□ -2.06
RAF1P04049 RNU6-595P-201ENST00000363944 107 ntBASIC2.18□□□□□ -2.06
RAF1P04049 Y_RNA.197-201ENST00000364004 102 ntBASIC2.18□□□□□ -2.06
RAF1P04049 RNU6-1286P-201ENST00000383871 107 ntBASIC2.18□□□□□ -2.06
RAF1P04049 SNORA36A-201ENST00000384221 132 ntBASIC2.18□□□□□ -2.06
RAF1P04049 Y_RNA.504-201ENST00000384481 104 ntBASIC2.18□□□□□ -2.06
RAF1P04049 MIR559-201ENST00000385188 96 ntBASIC2.18□□□□□ -2.06
RAF1P04049 EIF1AXP1-201ENST00000419267 435 ntBASIC2.18□□□□□ -2.06
RAF1P04049 DPH3P2-201ENST00000422618 250 ntBASIC2.18□□□□□ -2.06
RAF1P04049 MTCO2P12-201ENST00000427426 682 ntBASIC2.18□□□□□ -2.06
RAF1P04049 AC078809.1-201ENST00000427601 140 ntBASIC2.18□□□□□ -2.06
RAF1P04049 WARS2P1-201ENST00000429678 537 ntBASIC2.18□□□□□ -2.06
RAF1P04049 RPL23AP50-201ENST00000434149 455 ntBASIC2.18□□□□□ -2.06
RAF1P04049 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.18□□□□□ -2.06
RAF1P04049 Y_RNA.639-201ENST00000458981 102 ntBASIC2.18□□□□□ -2.06
RAF1P04049 snoU13.14-201ENST00000459372 104 ntBASIC2.18□□□□□ -2.06
RAF1P04049 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.18□□□□□ -2.06
RAF1P04049 AC108210.2-201ENST00000503681 201 ntBASIC2.18□□□□□ -2.06
RAF1P04049 AC022493.2-201ENST00000506122 481 ntBASIC2.18□□□□□ -2.06
RAF1P04049 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.18□□□□□ -2.06
RAF1P04049 RNU6-307P-201ENST00000516743 106 ntBASIC2.18□□□□□ -2.06
RAF1P04049 AC007375.1-201ENST00000554513 578 ntBASIC2.18□□□□□ -2.06
RAF1P04049 AC008121.3-201ENST00000618726 433 ntBASIC2.18□□□□□ -2.06
RAF1P04049 AC090971.5-201ENST00000621102 293 ntBASIC2.18□□□□□ -2.06
RAF1P04049 ZNF299P-201ENST00000406845 1804 ntBASIC2.18□□□□□ -2.06
RAF1P04049 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
RAF1P04049 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
RAF1P04049 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
RAF1P04049 ZNF720P1-201ENST00000562403 1939 ntBASIC2.17□□□□□ -2.06
RAF1P04049 AP000560.1-201ENST00000624150 1937 ntBASIC2.17□□□□□ -2.06
RAF1P04049 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
RAF1P04049 AC080100.1-201ENST00000624239 5356 ntBASIC2.17□□□□□ -2.06
RAF1P04049 RNU6-1115P-201ENST00000362490 106 ntBASIC2.17□□□□□ -2.06
RAF1P04049 RNY1P16-201ENST00000363063 111 ntBASIC2.17□□□□□ -2.06
RAF1P04049 Y_RNA.395-201ENST00000383945 109 ntBASIC2.17□□□□□ -2.06
RAF1P04049 RNU6-968P-201ENST00000384076 107 ntBASIC2.17□□□□□ -2.06
RAF1P04049 SNORA29-201ENST00000384183 140 ntBASIC2.17□□□□□ -2.06
RAF1P04049 RNU6-474P-201ENST00000384243 107 ntBASIC2.17□□□□□ -2.06
RAF1P04049 RN7SKP223-201ENST00000410582 62 ntBASIC2.17□□□□□ -2.06
RAF1P04049 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.17□□□□□ -2.06
RAF1P04049 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.17□□□□□ -2.06
RAF1P04049 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.17□□□□□ -2.06
RAF1P04049 AC068781.1-201ENST00000488231 618 ntBASIC2.17□□□□□ -2.06
RAF1P04049 RPL23AP75-201ENST00000491601 451 ntBASIC2.17□□□□□ -2.06
RAF1P04049 RN7SL636P-201ENST00000497504 294 ntBASIC2.17□□□□□ -2.06
RAF1P04049 AC016632.1-201ENST00000503994 196 ntBASIC2.17□□□□□ -2.06
RAF1P04049 RNU5F-2P-201ENST00000516066 82 ntBASIC2.17□□□□□ -2.06
RAF1P04049 SNORA31.16-201ENST00000516773 139 ntBASIC2.17□□□□□ -2.06
RAF1P04049 RNU6-586P-201ENST00000517265 104 ntBASIC2.17□□□□□ -2.06
RAF1P04049 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.17□□□□□ -2.06
RAF1P04049 MIR5694-201ENST00000581190 76 ntBASIC2.17□□□□□ -2.06
RAF1P04049 MIR4719-201ENST00000585233 84 ntBASIC2.17□□□□□ -2.06
RAF1P04049 AL078605.1-201ENST00000603529 500 ntBASIC2.17□□□□□ -2.06
RAF1P04049 CYP2C61P-201ENST00000604072 290 ntBASIC2.17□□□□□ -2.06
RAF1P04049 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
RAF1P04049 AC233981.2-201ENST00000611524 1614 ntBASIC2.17□□□□□ -2.06
RAF1P04049 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms