Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 RNU6-596P-201ENST00000365395 98 ntBASIC1.9□□□□□ -2.11
MT-ND1P03886 Y_RNA.356-201ENST00000365475 113 ntBASIC1.9□□□□□ -2.11
MT-ND1P03886 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
MT-ND1P03886 RNU6-546P-201ENST00000383991 107 ntBASIC1.9□□□□□ -2.11
MT-ND1P03886 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
MT-ND1P03886 SNORA11.4-201ENST00000408823 129 ntBASIC1.9□□□□□ -2.11
MT-ND1P03886 RNA5SP450-201ENST00000411206 102 ntBASIC1.9□□□□□ -2.11
MT-ND1P03886 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.9□□□□□ -2.11
MT-ND1P03886 AC245102.2-201ENST00000448956 180 ntBASIC1.9□□□□□ -2.11
MT-ND1P03886 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.9□□□□□ -2.11
MT-ND1P03886 snoU13.6-201ENST00000458785 104 ntBASIC1.9□□□□□ -2.11
MT-ND1P03886 RPL7P42-201ENST00000481005 679 ntBASIC1.9□□□□□ -2.11
MT-ND1P03886 AC022447.4-201ENST00000504053 364 ntBASIC1.9□□□□□ -2.11
MT-ND1P03886 AC021146.2-201ENST00000504736 556 ntBASIC1.9□□□□□ -2.11
MT-ND1P03886 AC008413.1-201ENST00000511864 177 ntBASIC1.9□□□□□ -2.11
MT-ND1P03886 RNA5SP384-201ENST00000516615 116 ntBASIC1.9□□□□□ -2.11
MT-ND1P03886 MIR514B-201ENST00000516774 80 ntBASIC1.9□□□□□ -2.11
MT-ND1P03886 APOOP3-201ENST00000536787 586 ntBASIC1.9□□□□□ -2.11
MT-ND1P03886 RAB11AP2-201ENST00000545905 639 ntBASIC1.9□□□□□ -2.11
MT-ND1P03886 AC093027.1-201ENST00000546698 429 ntBASIC1.9□□□□□ -2.11
MT-ND1P03886 MIR5696-201ENST00000578474 85 ntBASIC1.9□□□□□ -2.11
MT-ND1P03886 FGF7P1-201ENST00000582820 288 ntBASIC1.9□□□□□ -2.11
MT-ND1P03886 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.9□□□□□ -2.11
MT-ND1P03886 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.9□□□□□ -2.11
MT-ND1P03886 AC005034.5-201ENST00000604219 466 ntBASIC1.9□□□□□ -2.11
MT-ND1P03886 Z98751.3-201ENST00000604447 521 ntBASIC1.9□□□□□ -2.11
MT-ND1P03886 AP000654.2-201ENST00000605633 586 ntBASIC1.9□□□□□ -2.11
MT-ND1P03886 AC009229.3-201ENST00000608056 282 ntBASIC1.9□□□□□ -2.11
MT-ND1P03886 AL627230.6-201ENST00000611129 280 ntBASIC1.9□□□□□ -2.11
MT-ND1P03886 AC025253.1-201ENST00000613623 543 ntBASIC1.9□□□□□ -2.11
MT-ND1P03886 uc_338.20-201ENST00000621563 178 ntBASIC1.9□□□□□ -2.11
MT-ND1P03886 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
MT-ND1P03886 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.89□□□□□ -2.11
MT-ND1P03886 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.89□□□□□ -2.11
MT-ND1P03886 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
MT-ND1P03886 RNU6-1286P-201ENST00000383871 107 ntBASIC1.89□□□□□ -2.11
MT-ND1P03886 RNU6-142P-201ENST00000384019 107 ntBASIC1.89□□□□□ -2.11
MT-ND1P03886 RNU6-611P-201ENST00000384276 104 ntBASIC1.89□□□□□ -2.11
MT-ND1P03886 Y_RNA.533-201ENST00000384596 114 ntBASIC1.89□□□□□ -2.11
MT-ND1P03886 MIR487A-201ENST00000385009 80 ntBASIC1.89□□□□□ -2.11
MT-ND1P03886 MIR29C-201ENST00000385231 88 ntBASIC1.89□□□□□ -2.11
MT-ND1P03886 SNORA12-201ENST00000391162 147 ntBASIC1.89□□□□□ -2.11
MT-ND1P03886 RNA5SP201-201ENST00000410316 124 ntBASIC1.89□□□□□ -2.11
MT-ND1P03886 RNU2-40P-201ENST00000410833 196 ntBASIC1.89□□□□□ -2.11
MT-ND1P03886 AC096920.1-201ENST00000423991 241 ntBASIC1.89□□□□□ -2.11
MT-ND1P03886 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.89□□□□□ -2.11
MT-ND1P03886 AL353689.1-201ENST00000438895 199 ntBASIC1.89□□□□□ -2.11
MT-ND1P03886 AC093019.1-201ENST00000443135 252 ntBASIC1.89□□□□□ -2.11
MT-ND1P03886 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.89□□□□□ -2.11
MT-ND1P03886 RPL23AP3-201ENST00000453844 468 ntBASIC1.89□□□□□ -2.11
MT-ND1P03886 RPL23AP75-201ENST00000491601 451 ntBASIC1.89□□□□□ -2.11
MT-ND1P03886 AF186996.7-201ENST00000492781 209 ntBASIC1.89□□□□□ -2.11
MT-ND1P03886 AC145146.1-201ENST00000496370 254 ntBASIC1.89□□□□□ -2.11
MT-ND1P03886 ACA59.1-201ENST00000515966 143 ntBASIC1.89□□□□□ -2.11
MT-ND1P03886 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.89□□□□□ -2.11
MT-ND1P03886 AC109446.1-201ENST00000566172 220 ntBASIC1.89□□□□□ -2.11
MT-ND1P03886 AL355375.2-201ENST00000574825 175 ntBASIC1.89□□□□□ -2.11
MT-ND1P03886 MIR3136-201ENST00000583498 78 ntBASIC1.89□□□□□ -2.11
MT-ND1P03886 AC010928.2-201ENST00000588017 287 ntBASIC1.89□□□□□ -2.11
MT-ND1P03886 AL117336.2-201ENST00000602435 335 ntBASIC1.89□□□□□ -2.11
MT-ND1P03886 AL109918.3-201ENST00000603072 338 ntBASIC1.89□□□□□ -2.11
MT-ND1P03886 AC113139.1-201ENST00000605049 239 ntBASIC1.89□□□□□ -2.11
MT-ND1P03886 AC098657.3-201ENST00000620434 263 ntBASIC1.89□□□□□ -2.11
MT-ND1P03886 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.89□□□□□ -2.11
MT-ND1P03886 MIR6873-201ENST00000622788 63 ntBASIC1.89□□□□□ -2.11
MT-ND1P03886 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.89□□□□□ -2.11
MT-ND1P03886 AC099654.5-201ENST00000636479 350 ntBASIC1.89□□□□□ -2.11
MT-ND1P03886 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
MT-ND1P03886 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
MT-ND1P03886 KPNA2P1-201ENST00000458289 1591 ntBASIC1.89□□□□□ -2.11
MT-ND1P03886 RNA5SP276-201ENST00000362580 94 ntBASIC1.88□□□□□ -2.11
MT-ND1P03886 RNU6-593P-201ENST00000364716 112 ntBASIC1.88□□□□□ -2.11
MT-ND1P03886 RNU6-968P-201ENST00000384076 107 ntBASIC1.88□□□□□ -2.11
MT-ND1P03886 RNU6-378P-201ENST00000384324 107 ntBASIC1.88□□□□□ -2.11
MT-ND1P03886 RNU6-331P-201ENST00000384724 107 ntBASIC1.88□□□□□ -2.11
MT-ND1P03886 SNORA75.4-201ENST00000391278 119 ntBASIC1.88□□□□□ -2.11
MT-ND1P03886 RNU6-370P-201ENST00000411008 104 ntBASIC1.88□□□□□ -2.11
MT-ND1P03886 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.88□□□□□ -2.11
MT-ND1P03886 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.88□□□□□ -2.11
MT-ND1P03886 Z82188.1-201ENST00000436709 154 ntBASIC1.88□□□□□ -2.11
MT-ND1P03886 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.88□□□□□ -2.11
MT-ND1P03886 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.88□□□□□ -2.11
MT-ND1P03886 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.88□□□□□ -2.11
MT-ND1P03886 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
MT-ND1P03886 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.88□□□□□ -2.11
MT-ND1P03886 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.88□□□□□ -2.11
MT-ND1P03886 CBX3P8-201ENST00000532412 525 ntBASIC1.88□□□□□ -2.11
MT-ND1P03886 AC022616.8-201ENST00000533569 253 ntBASIC1.88□□□□□ -2.11
MT-ND1P03886 AC021231.3-201ENST00000558497 370 ntBASIC1.88□□□□□ -2.11
MT-ND1P03886 ANP32BP3-201ENST00000559213 706 ntBASIC1.88□□□□□ -2.11
MT-ND1P03886 FRG2DP-202ENST00000566967 323 ntBASIC1.88□□□□□ -2.11
MT-ND1P03886 MIR4672-201ENST00000583126 81 ntBASIC1.88□□□□□ -2.11
MT-ND1P03886 Y_RNA.783-201ENST00000613546 102 ntBASIC1.88□□□□□ -2.11
MT-ND1P03886 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.88□□□□□ -2.11
MT-ND1P03886 AL008636.1-201ENST00000625038 1018 ntBASIC1.88□□□□□ -2.11
MT-ND1P03886 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.88□□□□□ -2.11
MT-ND1P03886 MTND4LP32-201ENST00000636111 270 ntBASIC1.88□□□□□ -2.11
MT-ND1P03886 MIR1302-1-201ENST00000637932 143 ntBASIC1.88□□□□□ -2.11
MT-ND1P03886 AL359851.1-201ENST00000569460 4997 ntBASIC1.88□□□□□ -2.11
MT-ND1P03886 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 180.9 ms