Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 RPS27AP14-201ENST00000422868 454 ntBASIC0.57□□□□□ -2.32
APOEP02649 AL133396.1-201ENST00000432048 687 ntBASIC0.57□□□□□ -2.32
APOEP02649 CETN4P-201ENST00000432407 469 ntBASIC0.57□□□□□ -2.32
APOEP02649 MTCO2P29-201ENST00000465212 189 ntBASIC0.57□□□□□ -2.32
APOEP02649 AC112204.1-201ENST00000502591 103 ntBASIC0.57□□□□□ -2.32
APOEP02649 AC023050.3-201ENST00000541142 333 ntBASIC0.57□□□□□ -2.32
APOEP02649 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.57□□□□□ -2.32
APOEP02649 AC009994.1-201ENST00000606889 253 ntBASIC0.57□□□□□ -2.32
APOEP02649 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.57□□□□□ -2.32
APOEP02649 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
APOEP02649 RNU6-969P-201ENST00000383900 105 ntBASIC0.56□□□□□ -2.32
APOEP02649 Y_RNA.504-201ENST00000384481 104 ntBASIC0.56□□□□□ -2.32
APOEP02649 RNU6-1235P-201ENST00000384559 107 ntBASIC0.56□□□□□ -2.32
APOEP02649 MIR200A-201ENST00000384875 90 ntBASIC0.56□□□□□ -2.32
APOEP02649 AF228730.1-201ENST00000397972 663 ntBASIC0.56□□□□□ -2.32
APOEP02649 MIR942-201ENST00000401111 86 ntBASIC0.56□□□□□ -2.32
APOEP02649 MIR208B-201ENST00000401172 77 ntBASIC0.56□□□□□ -2.32
APOEP02649 MTCO2P21-201ENST00000419780 677 ntBASIC0.56□□□□□ -2.32
APOEP02649 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.56□□□□□ -2.32
APOEP02649 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.56□□□□□ -2.32
APOEP02649 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.56□□□□□ -2.32
APOEP02649 SNAP23P1-201ENST00000433229 246 ntBASIC0.56□□□□□ -2.32
APOEP02649 HMGN2P34-201ENST00000437647 269 ntBASIC0.56□□□□□ -2.32
APOEP02649 AC245047.7-201ENST00000440265 293 ntBASIC0.56□□□□□ -2.32
APOEP02649 AL606517.2-201ENST00000442855 241 ntBASIC0.56□□□□□ -2.32
APOEP02649 AC016717.1-201ENST00000448918 286 ntBASIC0.56□□□□□ -2.32
APOEP02649 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC0.56□□□□□ -2.32
APOEP02649 RNU6-498P-201ENST00000459468 107 ntBASIC0.56□□□□□ -2.32
APOEP02649 RPS27P22-201ENST00000478056 241 ntBASIC0.56□□□□□ -2.32
APOEP02649 TRBVA-201ENST00000498804 316 ntBASIC0.56□□□□□ -2.32
APOEP02649 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.56□□□□□ -2.32
APOEP02649 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.56□□□□□ -2.32
APOEP02649 DEFB131C-201ENST00000528817 165 ntBASIC0.56□□□□□ -2.32
APOEP02649 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.56□□□□□ -2.32
APOEP02649 AC068790.6-201ENST00000602558 258 ntBASIC0.56□□□□□ -2.32
APOEP02649 RPL17P51-201ENST00000605218 238 ntBASIC0.56□□□□□ -2.32
APOEP02649 AL121992.2-201ENST00000606262 256 ntBASIC0.56□□□□□ -2.32
APOEP02649 AC104010.1-201ENST00000616889 150 ntBASIC0.56□□□□□ -2.32
APOEP02649 AC106754.2-201ENST00000623006 233 ntBASIC0.56□□□□□ -2.32
APOEP02649 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.56□□□□□ -2.32
APOEP02649 snoU2-30.2-201ENST00000362805 70 ntBASIC0.55□□□□□ -2.32
APOEP02649 RNU6-179P-201ENST00000363350 107 ntBASIC0.55□□□□□ -2.32
APOEP02649 RNU4-12P-201ENST00000365233 139 ntBASIC0.55□□□□□ -2.32
APOEP02649 RNU6-157P-201ENST00000383957 107 ntBASIC0.55□□□□□ -2.32
APOEP02649 RNU6-1031P-201ENST00000384773 107 ntBASIC0.55□□□□□ -2.32
APOEP02649 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.55□□□□□ -2.32
APOEP02649 AC013470.1-201ENST00000453438 462 ntBASIC0.55□□□□□ -2.32
APOEP02649 AC016632.1-201ENST00000503994 196 ntBASIC0.55□□□□□ -2.32
APOEP02649 SNORA31.10-201ENST00000516482 106 ntBASIC0.55□□□□□ -2.32
APOEP02649 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.55□□□□□ -2.32
APOEP02649 AL031775.1-201ENST00000607014 887 ntBASIC0.55□□□□□ -2.32
APOEP02649 MIR6515-201ENST00000619843 57 ntBASIC0.55□□□□□ -2.32
APOEP02649 MIR6513-201ENST00000621188 64 ntBASIC0.55□□□□□ -2.32
APOEP02649 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
APOEP02649 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
APOEP02649 RNU6-417P-201ENST00000384712 107 ntBASIC0.54□□□□□ -2.32
APOEP02649 RNA5SP467-201ENST00000391274 118 ntBASIC0.54□□□□□ -2.32
APOEP02649 MIR1283-1-201ENST00000408494 87 ntBASIC0.54□□□□□ -2.32
APOEP02649 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.54□□□□□ -2.32
APOEP02649 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.54□□□□□ -2.32
APOEP02649 TIMM9P3-201ENST00000428659 274 ntBASIC0.54□□□□□ -2.32
APOEP02649 MTATP6P16-201ENST00000434543 526 ntBASIC0.54□□□□□ -2.32
APOEP02649 AC105758.1-201ENST00000506038 399 ntBASIC0.54□□□□□ -2.32
APOEP02649 AC112206.4-201ENST00000515142 405 ntBASIC0.54□□□□□ -2.32
APOEP02649 RNU6-405P-201ENST00000516637 110 ntBASIC0.54□□□□□ -2.32
APOEP02649 RNU6-467P-201ENST00000517027 110 ntBASIC0.54□□□□□ -2.32
APOEP02649 RNU6-1220P-201ENST00000517126 108 ntBASIC0.54□□□□□ -2.32
APOEP02649 AC109479.2-201ENST00000517842 174 ntBASIC0.54□□□□□ -2.32
APOEP02649 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.54□□□□□ -2.32
APOEP02649 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.54□□□□□ -2.32
APOEP02649 Z99289.3-201ENST00000605586 594 ntBASIC0.54□□□□□ -2.32
APOEP02649 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.54□□□□□ -2.32
APOEP02649 AC004808.1-201ENST00000627671 721 ntBASIC0.54□□□□□ -2.32
APOEP02649 AL445984.1-201ENST00000637834 659 ntBASIC0.54□□□□□ -2.32
APOEP02649 RNU6-505P-201ENST00000384427 107 ntBASIC0.53□□□□□ -2.32
APOEP02649 RNU6-636P-201ENST00000384598 107 ntBASIC0.53□□□□□ -2.32
APOEP02649 RPS29P13-201ENST00000402041 169 ntBASIC0.53□□□□□ -2.32
APOEP02649 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.53□□□□□ -2.32
APOEP02649 AC002486.1-201ENST00000435098 391 ntBASIC0.53□□□□□ -2.32
APOEP02649 AC092628.1-201ENST00000436250 252 ntBASIC0.53□□□□□ -2.32
APOEP02649 AL157398.1-201ENST00000452981 186 ntBASIC0.53□□□□□ -2.32
APOEP02649 RNU6-1132P-201ENST00000459214 107 ntBASIC0.53□□□□□ -2.32
APOEP02649 BET1P1-201ENST00000482276 359 ntBASIC0.53□□□□□ -2.32
APOEP02649 COX6CP6-201ENST00000490840 228 ntBASIC0.53□□□□□ -2.32
APOEP02649 RPS26P48-201ENST00000491713 339 ntBASIC0.53□□□□□ -2.32
APOEP02649 AL512605.2-201ENST00000592972 256 ntBASIC0.53□□□□□ -2.32
APOEP02649 AL031281.1-201ENST00000604049 488 ntBASIC0.53□□□□□ -2.32
APOEP02649 AC104465.1-201ENST00000611365 139 ntBASIC0.53□□□□□ -2.32
APOEP02649 AC005520.5-201ENST00000613926 164 ntBASIC0.53□□□□□ -2.32
APOEP02649 AC008250.2-201ENST00000615261 205 ntBASIC0.53□□□□□ -2.32
APOEP02649 AL603839.4-201ENST00000624658 1005 ntBASIC0.53□□□□□ -2.32
APOEP02649 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.53□□□□□ -2.33
APOEP02649 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
APOEP02649 Y_RNA.118-201ENST00000363300 101 ntBASIC0.52□□□□□ -2.33
APOEP02649 RNA5SP499-201ENST00000363982 119 ntBASIC0.52□□□□□ -2.33
APOEP02649 SNORD115-7-201ENST00000365306 82 ntBASIC0.52□□□□□ -2.33
APOEP02649 RNU1-139P-201ENST00000391307 165 ntBASIC0.52□□□□□ -2.33
APOEP02649 MRPL42P2-201ENST00000403169 426 ntBASIC0.52□□□□□ -2.33
APOEP02649 RNU6-387P-201ENST00000411331 105 ntBASIC0.52□□□□□ -2.33
APOEP02649 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms