Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC027338.1-201ENST00000514840 825 ntBASIC-0.22□□□□□ -2.44
SPTA1P02549 IL7-206ENST00000520269 456 ntTSL 3 BASIC-0.22□□□□□ -2.44
SPTA1P02549 AC137800.2-201ENST00000574375 120 ntBASIC-0.22□□□□□ -2.44
SPTA1P02549 AC131055.1-201ENST00000584626 316 ntBASIC-0.22□□□□□ -2.44
SPTA1P02549 AC078795.2-201ENST00000602835 1252 ntBASIC-0.22□□□□□ -2.44
SPTA1P02549 SCARNA4-202ENST00000625402 129 ntBASIC-0.22□□□□□ -2.44
SPTA1P02549 OR5AK4P-201ENST00000635912 903 ntBASIC-0.22□□□□□ -2.44
SPTA1P02549 SNORA25.3-201ENST00000363205 127 ntBASIC-0.23□□□□□ -2.45
SPTA1P02549 Y_RNA.293-201ENST00000364908 93 ntBASIC-0.23□□□□□ -2.45
SPTA1P02549 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC-0.23□□□□□ -2.45
SPTA1P02549 MIR635-201ENST00000384830 98 ntBASIC-0.23□□□□□ -2.45
SPTA1P02549 UBE2V1P11-201ENST00000411559 285 ntBASIC-0.23□□□□□ -2.45
SPTA1P02549 MTCO1P57-201ENST00000432182 261 ntBASIC-0.23□□□□□ -2.45
SPTA1P02549 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.23□□□□□ -2.45
SPTA1P02549 MTND5P2-201ENST00000442927 1142 ntBASIC-0.23□□□□□ -2.45
SPTA1P02549 AL606662.1-201ENST00000445763 553 ntBASIC-0.23□□□□□ -2.45
SPTA1P02549 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC-0.23□□□□□ -2.45
SPTA1P02549 RPS3AP17-201ENST00000472594 777 ntBASIC-0.23□□□□□ -2.45
SPTA1P02549 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC-0.23□□□□□ -2.45
SPTA1P02549 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC-0.23□□□□□ -2.45
SPTA1P02549 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-0.23□□□□□ -2.45
SPTA1P02549 AL929325.1-201ENST00000603096 117 ntBASIC-0.23□□□□□ -2.45
SPTA1P02549 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC-0.23□□□□□ -2.45
SPTA1P02549 AL591926.4-201ENST00000616895 298 ntBASIC-0.23□□□□□ -2.45
SPTA1P02549 AL445264.1-201ENST00000621719 171 ntBASIC-0.23□□□□□ -2.45
SPTA1P02549 MIR3529-201ENST00000637713 78 ntBASIC-0.23□□□□□ -2.45
SPTA1P02549 Y_RNA.55-201ENST00000362797 102 ntBASIC-0.23□□□□□ -2.45
SPTA1P02549 RNU6-10P-201ENST00000384036 107 ntBASIC-0.23□□□□□ -2.45
SPTA1P02549 RNU6-15P-201ENST00000384534 107 ntBASIC-0.23□□□□□ -2.45
SPTA1P02549 RNU6-950P-201ENST00000384651 107 ntBASIC-0.23□□□□□ -2.45
SPTA1P02549 MIR643-201ENST00000385267 97 ntBASIC-0.23□□□□□ -2.45
SPTA1P02549 AL451046.2-201ENST00000403074 277 ntBASIC-0.23□□□□□ -2.45
SPTA1P02549 AC003071.1-201ENST00000451219 789 ntBASIC-0.23□□□□□ -2.45
SPTA1P02549 SNORD4A-201ENST00000459174 72 ntBASIC-0.23□□□□□ -2.45
SPTA1P02549 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-0.23□□□□□ -2.45
SPTA1P02549 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC-0.23□□□□□ -2.45
SPTA1P02549 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC-0.23□□□□□ -2.45
SPTA1P02549 AP002001.1-203ENST00000534002 267 ntBASIC-0.23□□□□□ -2.45
SPTA1P02549 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.23□□□□□ -2.45
SPTA1P02549 ZNF519P3-201ENST00000557158 1032 ntBASIC-0.23□□□□□ -2.45
SPTA1P02549 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC-0.23□□□□□ -2.45
SPTA1P02549 RPL23AP91-201ENST00000569211 455 ntBASIC-0.23□□□□□ -2.45
SPTA1P02549 NAMPTP3-201ENST00000569273 224 ntBASIC-0.23□□□□□ -2.45
SPTA1P02549 AC090615.1-201ENST00000577519 154 ntBASIC-0.23□□□□□ -2.45
SPTA1P02549 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC-0.23□□□□□ -2.45
SPTA1P02549 AC104695.3-201ENST00000604052 296 ntBASIC-0.23□□□□□ -2.45
SPTA1P02549 AL451064.1-201ENST00000607718 471 ntBASIC-0.23□□□□□ -2.45
SPTA1P02549 AC091304.9-201ENST00000612091 226 ntBASIC-0.23□□□□□ -2.45
SPTA1P02549 RNU6-1066P-201ENST00000363573 105 ntBASIC-0.24□□□□□ -2.45
SPTA1P02549 SNORD113.3-201ENST00000364630 78 ntBASIC-0.24□□□□□ -2.45
SPTA1P02549 RNY4P16-201ENST00000364768 94 ntBASIC-0.24□□□□□ -2.45
SPTA1P02549 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC-0.24□□□□□ -2.45
SPTA1P02549 SNORA2B-201ENST00000384583 137 ntBASIC-0.24□□□□□ -2.45
SPTA1P02549 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC-0.24□□□□□ -2.45
SPTA1P02549 AL627311.1-201ENST00000431514 115 ntBASIC-0.24□□□□□ -2.45
SPTA1P02549 ART2BP-201ENST00000453501 499 ntBASIC-0.24□□□□□ -2.45
SPTA1P02549 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC-0.24□□□□□ -2.45
SPTA1P02549 AC106038.2-201ENST00000520706 568 ntBASIC-0.24□□□□□ -2.45
SPTA1P02549 AC069113.3-201ENST00000521019 150 ntBASIC-0.24□□□□□ -2.45
SPTA1P02549 MTCO3P15-201ENST00000526563 574 ntBASIC-0.24□□□□□ -2.45
SPTA1P02549 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC-0.24□□□□□ -2.45
SPTA1P02549 Z99497.2-201ENST00000603634 310 ntBASIC-0.24□□□□□ -2.45
SPTA1P02549 RNU6-94P-201ENST00000607728 107 ntBASIC-0.24□□□□□ -2.45
SPTA1P02549 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC-0.24□□□□□ -2.45
SPTA1P02549 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.24□□□□□ -2.45
SPTA1P02549 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.24□□□□□ -2.45
SPTA1P02549 MIR660-201ENST00000385235 97 ntBASIC-0.24□□□□□ -2.45
SPTA1P02549 AL079342.2-201ENST00000403367 482 ntBASIC-0.24□□□□□ -2.45
SPTA1P02549 C1DP2-201ENST00000418167 426 ntBASIC-0.24□□□□□ -2.45
SPTA1P02549 AC123900.1-201ENST00000420390 96 ntBASIC-0.24□□□□□ -2.45
SPTA1P02549 COX7BP2-201ENST00000437976 242 ntBASIC-0.24□□□□□ -2.45
SPTA1P02549 ELOCP30-201ENST00000447108 299 ntBASIC-0.24□□□□□ -2.45
SPTA1P02549 C1DP4-201ENST00000455429 424 ntBASIC-0.24□□□□□ -2.45
SPTA1P02549 AC113410.1-201ENST00000505029 247 ntBASIC-0.24□□□□□ -2.45
SPTA1P02549 RNU6-760P-201ENST00000516078 97 ntBASIC-0.24□□□□□ -2.45
SPTA1P02549 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC-0.24□□□□□ -2.45
SPTA1P02549 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC-0.24□□□□□ -2.45
SPTA1P02549 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC-0.24□□□□□ -2.45
SPTA1P02549 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC-0.24□□□□□ -2.45
SPTA1P02549 AC112693.2-201ENST00000556538 232 ntBASIC-0.24□□□□□ -2.45
SPTA1P02549 MIR548AZ-201ENST00000616567 95 ntBASIC-0.24□□□□□ -2.45
SPTA1P02549 MIR145-201ENST00000384967 88 ntBASIC-0.25□□□□□ -2.45
SPTA1P02549 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC-0.25□□□□□ -2.45
SPTA1P02549 RNA5SP467-201ENST00000391274 118 ntBASIC-0.25□□□□□ -2.45
SPTA1P02549 SNORD75.1-201ENST00000408373 60 ntBASIC-0.25□□□□□ -2.45
SPTA1P02549 RNU2-42P-201ENST00000410697 113 ntBASIC-0.25□□□□□ -2.45
SPTA1P02549 BTF3L4P1-201ENST00000413813 468 ntBASIC-0.25□□□□□ -2.45
SPTA1P02549 MTCO3P41-201ENST00000414801 328 ntBASIC-0.25□□□□□ -2.45
SPTA1P02549 AL354692.1-201ENST00000423044 315 ntBASIC-0.25□□□□□ -2.45
SPTA1P02549 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC-0.25□□□□□ -2.45
SPTA1P02549 FABP5P4-201ENST00000437203 171 ntBASIC-0.25□□□□□ -2.45
SPTA1P02549 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC-0.25□□□□□ -2.45
SPTA1P02549 AP000797.1-201ENST00000478870 387 ntBASIC-0.25□□□□□ -2.45
SPTA1P02549 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.25□□□□□ -2.45
SPTA1P02549 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.25□□□□□ -2.45
SPTA1P02549 AC011195.1-201ENST00000578177 177 ntBASIC-0.25□□□□□ -2.45
SPTA1P02549 AL359075.3-201ENST00000613288 217 ntBASIC-0.25□□□□□ -2.45
SPTA1P02549 AL159153.1-201ENST00000619688 317 ntBASIC-0.25□□□□□ -2.45
SPTA1P02549 MIR4320-201ENST00000636981 65 ntBASIC-0.25□□□□□ -2.45
SPTA1P02549 AC010154.1-201ENST00000425857 269 ntBASIC-0.25□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms