Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 HIGD1AP15-201ENST00000416198 280 ntBASIC0.41□□□□□ -2.34
COL1A1P02452 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
COL1A1P02452 MTND1P32-201ENST00000433043 938 ntBASIC0.41□□□□□ -2.34
COL1A1P02452 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.41□□□□□ -2.34
COL1A1P02452 MTND1P12-201ENST00000455231 147 ntBASIC0.41□□□□□ -2.34
COL1A1P02452 AL049829.1-201ENST00000465411 156 ntBASIC0.41□□□□□ -2.34
COL1A1P02452 AC117522.1-201ENST00000509821 380 ntBASIC0.41□□□□□ -2.34
COL1A1P02452 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.41□□□□□ -2.34
COL1A1P02452 AC008752.3-201ENST00000588113 712 ntBASIC0.41□□□□□ -2.34
COL1A1P02452 BNIP3P16-201ENST00000589779 534 ntBASIC0.41□□□□□ -2.34
COL1A1P02452 AC080013.3-201ENST00000606839 578 ntBASIC0.41□□□□□ -2.34
COL1A1P02452 uc_338.17-201ENST00000619633 179 ntBASIC0.41□□□□□ -2.34
COL1A1P02452 AP002782.1-201ENST00000623107 614 ntBASIC0.41□□□□□ -2.34
COL1A1P02452 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.41□□□□□ -2.34
COL1A1P02452 MTND4P14-201ENST00000435799 1354 ntBASIC0.41□□□□□ -2.34
COL1A1P02452 AL590135.1-201ENST00000422215 156 ntBASIC0.41□□□□□ -2.34
COL1A1P02452 AC019205.3-201ENST00000424573 156 ntBASIC0.41□□□□□ -2.34
COL1A1P02452 AC010975.2-201ENST00000427781 588 ntBASIC0.41□□□□□ -2.34
COL1A1P02452 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.41□□□□□ -2.34
COL1A1P02452 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.41□□□□□ -2.34
COL1A1P02452 AC016700.2-201ENST00000446011 156 ntBASIC0.41□□□□□ -2.34
COL1A1P02452 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.41□□□□□ -2.34
COL1A1P02452 AL360271.2-201ENST00000447710 161 ntBASIC0.41□□□□□ -2.34
COL1A1P02452 SNRPGP7-201ENST00000469016 106 ntBASIC0.41□□□□□ -2.34
COL1A1P02452 AC015911.1-201ENST00000495111 156 ntBASIC0.41□□□□□ -2.34
COL1A1P02452 MTND3P25-201ENST00000509243 135 ntBASIC0.41□□□□□ -2.34
COL1A1P02452 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.41□□□□□ -2.34
COL1A1P02452 AC116347.2-201ENST00000514912 523 ntBASIC0.41□□□□□ -2.34
COL1A1P02452 RNU6-1041P-201ENST00000516254 102 ntBASIC0.41□□□□□ -2.34
COL1A1P02452 RNU6-1098P-201ENST00000516772 96 ntBASIC0.41□□□□□ -2.34
COL1A1P02452 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.41□□□□□ -2.34
COL1A1P02452 AL442163.3-201ENST00000554110 156 ntBASIC0.41□□□□□ -2.34
COL1A1P02452 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC0.41□□□□□ -2.34
COL1A1P02452 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.41□□□□□ -2.34
COL1A1P02452 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.41□□□□□ -2.34
COL1A1P02452 MTND3P19-201ENST00000603825 345 ntBASIC0.41□□□□□ -2.34
COL1A1P02452 AL356157.2-201ENST00000605122 111 ntBASIC0.41□□□□□ -2.34
COL1A1P02452 PCGEM1.1-201ENST00000613431 131 ntBASIC0.41□□□□□ -2.34
COL1A1P02452 AC068647.2-201ENST00000637380 353 ntBASIC0.41□□□□□ -2.34
COL1A1P02452 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
COL1A1P02452 RNA5SP259-201ENST00000365541 109 ntBASIC0.4□□□□□ -2.35
COL1A1P02452 RNU6-43P-201ENST00000384302 107 ntBASIC0.4□□□□□ -2.35
COL1A1P02452 MIR200A-201ENST00000384875 90 ntBASIC0.4□□□□□ -2.35
COL1A1P02452 AL031779.1-201ENST00000415663 330 ntBASIC0.4□□□□□ -2.35
COL1A1P02452 C1DP2-201ENST00000418167 426 ntBASIC0.4□□□□□ -2.35
COL1A1P02452 MTCO2P21-201ENST00000419780 677 ntBASIC0.4□□□□□ -2.35
COL1A1P02452 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.4□□□□□ -2.35
COL1A1P02452 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.4□□□□□ -2.35
COL1A1P02452 AC074344.1-201ENST00000512823 224 ntBASIC0.4□□□□□ -2.35
COL1A1P02452 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.4□□□□□ -2.35
COL1A1P02452 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.4□□□□□ -2.35
COL1A1P02452 MIR4709-201ENST00000577272 72 ntBASIC0.4□□□□□ -2.35
COL1A1P02452 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC0.4□□□□□ -2.35
COL1A1P02452 MIR5190-201ENST00000581537 80 ntBASIC0.4□□□□□ -2.35
COL1A1P02452 AC008521.1-201ENST00000587471 187 ntBASIC0.4□□□□□ -2.35
COL1A1P02452 AC110760.3-201ENST00000598794 467 ntBASIC0.4□□□□□ -2.35
COL1A1P02452 AC107304.1-201ENST00000604229 296 ntBASIC0.4□□□□□ -2.35
COL1A1P02452 AC104073.3-201ENST00000610942 955 ntBASIC0.4□□□□□ -2.35
COL1A1P02452 AC040896.1-201ENST00000613819 479 ntBASIC0.4□□□□□ -2.35
COL1A1P02452 AC008147.4-201ENST00000617570 1204 ntBASIC0.4□□□□□ -2.35
COL1A1P02452 UGP2-231ENST00000627474 264 ntTSL 5 BASIC0.4□□□□□ -2.35
COL1A1P02452 AC006927.4-201ENST00000639187 543 ntBASIC0.4□□□□□ -2.35
COL1A1P02452 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
COL1A1P02452 RNU4-92P-201ENST00000363783 136 ntBASIC0.39□□□□□ -2.35
COL1A1P02452 RNU4-68P-201ENST00000364314 141 ntBASIC0.39□□□□□ -2.35
COL1A1P02452 SNORA24.1-201ENST00000384401 135 ntBASIC0.39□□□□□ -2.35
COL1A1P02452 RNU6-1026P-201ENST00000384465 108 ntBASIC0.39□□□□□ -2.35
COL1A1P02452 RNU6-110P-201ENST00000384508 104 ntBASIC0.39□□□□□ -2.35
COL1A1P02452 MRPL42P2-201ENST00000403169 426 ntBASIC0.39□□□□□ -2.35
COL1A1P02452 RNU2-3P-201ENST00000410144 191 ntBASIC0.39□□□□□ -2.35
COL1A1P02452 RNU6-607P-201ENST00000411283 108 ntBASIC0.39□□□□□ -2.35
COL1A1P02452 RPL23AP95-201ENST00000426806 265 ntBASIC0.39□□□□□ -2.35
COL1A1P02452 AC244023.1-201ENST00000426884 112 ntBASIC0.39□□□□□ -2.35
COL1A1P02452 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.39□□□□□ -2.35
COL1A1P02452 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.39□□□□□ -2.35
COL1A1P02452 RBBP4P6-201ENST00000508098 202 ntBASIC0.39□□□□□ -2.35
COL1A1P02452 SUMO2P16-201ENST00000519475 264 ntBASIC0.39□□□□□ -2.35
COL1A1P02452 AC022616.6-201ENST00000520479 119 ntBASIC0.39□□□□□ -2.35
COL1A1P02452 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.39□□□□□ -2.35
COL1A1P02452 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC0.39□□□□□ -2.35
COL1A1P02452 AC025423.5-201ENST00000550230 219 ntBASIC0.39□□□□□ -2.35
COL1A1P02452 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.39□□□□□ -2.35
COL1A1P02452 AC022432.1-201ENST00000595739 310 ntBASIC0.39□□□□□ -2.35
COL1A1P02452 BNIP3P40-201ENST00000596017 556 ntBASIC0.39□□□□□ -2.35
COL1A1P02452 AC242498.1-201ENST00000604134 111 ntBASIC0.39□□□□□ -2.35
COL1A1P02452 AC243994.1-201ENST00000618627 109 ntBASIC0.39□□□□□ -2.35
COL1A1P02452 AC097372.5-201ENST00000623665 376 ntBASIC0.39□□□□□ -2.35
COL1A1P02452 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC0.39□□□□□ -2.35
COL1A1P02452 U3.4-201ENST00000363352 213 ntBASIC0.38□□□□□ -2.35
COL1A1P02452 RNU5E-10P-201ENST00000363506 118 ntBASIC0.38□□□□□ -2.35
COL1A1P02452 Y_RNA.324-201ENST00000365165 102 ntBASIC0.38□□□□□ -2.35
COL1A1P02452 RNU6-25P-201ENST00000383873 107 ntBASIC0.38□□□□□ -2.35
COL1A1P02452 RNU6-48P-201ENST00000384161 107 ntBASIC0.38□□□□□ -2.35
COL1A1P02452 RNU6-15P-201ENST00000384534 107 ntBASIC0.38□□□□□ -2.35
COL1A1P02452 RNU6-29P-201ENST00000384637 107 ntBASIC0.38□□□□□ -2.35
COL1A1P02452 SNORD115.1-201ENST00000391109 76 ntBASIC0.38□□□□□ -2.35
COL1A1P02452 RNA5SP201-201ENST00000410316 124 ntBASIC0.38□□□□□ -2.35
COL1A1P02452 RPS26P5-201ENST00000418544 335 ntBASIC0.38□□□□□ -2.35
COL1A1P02452 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.38□□□□□ -2.35
COL1A1P02452 MTND1P20-201ENST00000430341 950 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms