Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 RNU7-187P-201ENST00000458985 68 ntBASIC1.96□□□□□ -2.1
PDGFBP01127 AC025465.4-201ENST00000513422 638 ntBASIC1.96□□□□□ -2.1
PDGFBP01127 RNU6-256P-201ENST00000516747 97 ntBASIC1.96□□□□□ -2.1
PDGFBP01127 MTND1P5-201ENST00000517906 940 ntBASIC1.96□□□□□ -2.1
PDGFBP01127 DNAJC19P9-201ENST00000555084 351 ntBASIC1.96□□□□□ -2.1
PDGFBP01127 MIR3672-201ENST00000584290 82 ntBASIC1.96□□□□□ -2.1
PDGFBP01127 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
PDGFBP01127 SNORD98-201ENST00000636377 67 ntBASIC1.96□□□□□ -2.1
PDGFBP01127 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
PDGFBP01127 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
PDGFBP01127 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.96□□□□□ -2.1
PDGFBP01127 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.95□□□□□ -2.1
PDGFBP01127 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
PDGFBP01127 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
PDGFBP01127 Y_RNA.123-201ENST00000363338 102 ntBASIC1.95□□□□□ -2.1
PDGFBP01127 RNU6-944P-201ENST00000364023 107 ntBASIC1.95□□□□□ -2.1
PDGFBP01127 Y_RNA.248-201ENST00000364501 109 ntBASIC1.95□□□□□ -2.1
PDGFBP01127 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
PDGFBP01127 Y_RNA.414-201ENST00000384011 101 ntBASIC1.95□□□□□ -2.1
PDGFBP01127 RNU6-831P-201ENST00000384548 107 ntBASIC1.95□□□□□ -2.1
PDGFBP01127 RNU6-306P-201ENST00000384617 107 ntBASIC1.95□□□□□ -2.1
PDGFBP01127 BTF3L4P2-201ENST00000392798 346 ntBASIC1.95□□□□□ -2.1
PDGFBP01127 Y_RNA.597-201ENST00000410463 100 ntBASIC1.95□□□□□ -2.1
PDGFBP01127 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.95□□□□□ -2.1
PDGFBP01127 MTCO3P18-201ENST00000440206 761 ntBASIC1.95□□□□□ -2.1
PDGFBP01127 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.95□□□□□ -2.1
PDGFBP01127 AC090255.1-201ENST00000495779 349 ntBASIC1.95□□□□□ -2.1
PDGFBP01127 AC022447.4-201ENST00000504053 364 ntBASIC1.95□□□□□ -2.1
PDGFBP01127 AC018710.1-201ENST00000506509 158 ntBASIC1.95□□□□□ -2.1
PDGFBP01127 AC096745.1-201ENST00000509945 370 ntBASIC1.95□□□□□ -2.1
PDGFBP01127 FAM206BP-201ENST00000510179 541 ntBASIC1.95□□□□□ -2.1
PDGFBP01127 RNU4-49P-201ENST00000516080 140 ntBASIC1.95□□□□□ -2.1
PDGFBP01127 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.95□□□□□ -2.1
PDGFBP01127 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.95□□□□□ -2.1
PDGFBP01127 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.95□□□□□ -2.1
PDGFBP01127 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.95□□□□□ -2.1
PDGFBP01127 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.95□□□□□ -2.1
PDGFBP01127 AP001836.1-201ENST00000604675 523 ntBASIC1.95□□□□□ -2.1
PDGFBP01127 AL773524.1-201ENST00000614065 229 ntBASIC1.95□□□□□ -2.1
PDGFBP01127 U1.36-201ENST00000620684 176 ntBASIC1.95□□□□□ -2.1
PDGFBP01127 AL136221.1-201ENST00000621449 509 ntBASIC1.95□□□□□ -2.1
PDGFBP01127 AC009033.1-201ENST00000624279 431 ntBASIC1.95□□□□□ -2.1
PDGFBP01127 AC121333.1-201ENST00000567488 2709 ntBASIC1.94□□□□□ -2.1
PDGFBP01127 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.94□□□□□ -2.1
PDGFBP01127 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
PDGFBP01127 Y_RNA.530-201ENST00000384587 101 ntBASIC1.94□□□□□ -2.1
PDGFBP01127 RNU6-876P-201ENST00000391295 104 ntBASIC1.94□□□□□ -2.1
PDGFBP01127 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
PDGFBP01127 RPS29P13-201ENST00000402041 169 ntBASIC1.94□□□□□ -2.1
PDGFBP01127 RPL30P16-201ENST00000419341 429 ntBASIC1.94□□□□□ -2.1
PDGFBP01127 AC244636.1-201ENST00000421152 228 ntBASIC1.94□□□□□ -2.1
PDGFBP01127 HMGN2P38-201ENST00000423806 265 ntBASIC1.94□□□□□ -2.1
PDGFBP01127 WARS2P1-201ENST00000429678 537 ntBASIC1.94□□□□□ -2.1
PDGFBP01127 SNAP23P1-201ENST00000433229 246 ntBASIC1.94□□□□□ -2.1
PDGFBP01127 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.94□□□□□ -2.1
PDGFBP01127 snoU13.6-201ENST00000458785 104 ntBASIC1.94□□□□□ -2.1
PDGFBP01127 RNU7-95P-201ENST00000459222 64 ntBASIC1.94□□□□□ -2.1
PDGFBP01127 RPS29P11-201ENST00000496507 171 ntBASIC1.94□□□□□ -2.1
PDGFBP01127 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.94□□□□□ -2.1
PDGFBP01127 COPS8P3-201ENST00000526024 482 ntBASIC1.94□□□□□ -2.1
PDGFBP01127 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.94□□□□□ -2.1
PDGFBP01127 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.94□□□□□ -2.1
PDGFBP01127 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.94□□□□□ -2.1
PDGFBP01127 MIR3136-201ENST00000583498 78 ntBASIC1.94□□□□□ -2.1
PDGFBP01127 AC018889.1-201ENST00000605372 397 ntBASIC1.94□□□□□ -2.1
PDGFBP01127 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.94□□□□□ -2.1
PDGFBP01127 AC122108.2-201ENST00000611946 526 ntBASIC1.94□□□□□ -2.1
PDGFBP01127 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
PDGFBP01127 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
PDGFBP01127 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.94□□□□□ -2.1
PDGFBP01127 RNU6-562P-201ENST00000362731 107 ntBASIC1.93□□□□□ -2.1
PDGFBP01127 Y_RNA.99-201ENST00000363138 105 ntBASIC1.93□□□□□ -2.1
PDGFBP01127 SNORD32A-201ENST00000364805 84 ntBASIC1.93□□□□□ -2.1
PDGFBP01127 RNU4-52P-201ENST00000384209 138 ntBASIC1.93□□□□□ -2.1
PDGFBP01127 RNY1P14-201ENST00000384426 108 ntBASIC1.93□□□□□ -2.1
PDGFBP01127 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
PDGFBP01127 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
PDGFBP01127 RNA5SP212-201ENST00000391223 107 ntBASIC1.93□□□□□ -2.1
PDGFBP01127 AL030996.1-201ENST00000411430 235 ntBASIC1.93□□□□□ -2.1
PDGFBP01127 HMGN2P19-201ENST00000425149 265 ntBASIC1.93□□□□□ -2.1
PDGFBP01127 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.93□□□□□ -2.1
PDGFBP01127 IFNA20P-201ENST00000436840 528 ntBASIC1.93□□□□□ -2.1
PDGFBP01127 MTND4LP16-201ENST00000440828 295 ntBASIC1.93□□□□□ -2.1
PDGFBP01127 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.93□□□□□ -2.1
PDGFBP01127 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.93□□□□□ -2.1
PDGFBP01127 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.93□□□□□ -2.1
PDGFBP01127 PPP1R2P5-201ENST00000457256 603 ntBASIC1.93□□□□□ -2.1
PDGFBP01127 AC145146.1-201ENST00000496370 254 ntBASIC1.93□□□□□ -2.1
PDGFBP01127 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.93□□□□□ -2.1
PDGFBP01127 RNU6-250P-201ENST00000516958 103 ntBASIC1.93□□□□□ -2.1
PDGFBP01127 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.93□□□□□ -2.1
PDGFBP01127 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.93□□□□□ -2.1
PDGFBP01127 VN1R107P-201ENST00000601784 209 ntBASIC1.93□□□□□ -2.1
PDGFBP01127 AC078795.3-201ENST00000602913 472 ntBASIC1.93□□□□□ -2.1
PDGFBP01127 CYP2C61P-201ENST00000604072 290 ntBASIC1.93□□□□□ -2.1
PDGFBP01127 AP000654.2-201ENST00000605633 586 ntBASIC1.93□□□□□ -2.1
PDGFBP01127 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.93□□□□□ -2.1
PDGFBP01127 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.93□□□□□ -2.1
PDGFBP01127 AP000560.1-201ENST00000624150 1937 ntBASIC1.93□□□□□ -2.1
PDGFBP01127 CENPCP1-201ENST00000533085 2578 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 174.6 ms